Clavibacter nebraskensis: CMN_01229
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Entry
CMN_01229 CDS
T02530
Name
(GenBank) unnamed protein product; Cmm ortholog CMM_1259; Cms ortholog CMS_1012
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CMN_01229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmc04131
]
CMN_01229
Enzymes [BR:
cmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
CMN_01229
Membrane trafficking [BR:
cmc04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
CMN_01229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Ams1-like_1st
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
CCE75181
UniProt:
A0AAI9EIU9
LinkDB
All DBs
Position
complement(1267682..1270708)
Genome browser
AA seq
1008 aa
AA seq
DB search
MPPTTALAEARIERFVRDRLVPNIHRRRMPLAIEAWDAPGEPVPFADAVRQEYRPFAVGT
PWSRAWGTTWFHVTGTVPDDGAADGTALEVLVDLGFSERQPGFQAEGLVHRPDGSVVKAI
EPYNGYVPLAAIGAGTAPGTPIDLWIEAASNPDIGGDSFHGETPLGDPATAGDDPIYRLR
TMDLAWRDEAVWELDRDVWTLRGLMAQLEPASSRRAEILAALERMCDAVDPDDVAGTAAA
GRRELEAVLAAPAHASAHRITAVGHAHIDSAWLWPVRETRRKVARTFSNGLALMDEDADF
VFAASSAQQYAWLKEDHPELFERLRRRVAEGRFVPVGGMWVESDTNMPGGEALVRQLVQG
KRFFLEEFGIDSREVWLPDSFGYTGALPQIVRGAGAEYFFTQKQSWNETNTMPHHTFLWE
GIDGSRVFTHFPPVDSYNSDLSGEDLARAERQHAEKAVSNASIVPFGWGDGGGGPTREMV
AAAHRTRDLEGSPRVQLGTPLEFFDTARAEIRDPHVWSGEMYLEFHRGTYTSQARTKQGN
RRSEHLLREAELWLATAAVRDLVAYPHDELDALWRTVLLLQFHDILPGTSIAWVHQEAER
EHARVQERLRELVADAQSALAGSGDRRVAFNAAPVDAAGVGALSAAVVDPSPASPAPVVD
GDGWLLDNGLVRARFDADGTVSSLVDAASGRDLVAPGQRLGLLQLFRDTPNQWDAWDIDD
AYRRNRTDLTDVSDVRIDGAALVVERAFGTSRVTQTWTVPAGEPELQVVTDVDWHERQKL
LKLAFPLDVHADRAASEVQFGHVQRVTHANTSWETARFETVAHRWVHVGEPGFGVAVAND
ATYGHDVTRIPRPDGGSATLVRQSLLRAPVFPDPHADQGRHVLRSAVRVAPDVLDAADAG
YRLNLPVREVAGDHGVAPLVTSSNAAVVIEAVKLAEDRSGDLVVRLYEARGGRERTVVRV
DAAAGLGLSSPTDLLERPLEGADAQATGDGIELTLRPFEIATLRFARR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaccaccgcgctcgccgaggcccgcatcgagcgcttcgtccgcgaccggctc
gtgccgaacatccaccgccgacgcatgccgctcgcgatcgaggcgtgggacgcccccggc
gaaccggtgccgttcgccgatgccgtgcggcaggagtaccggcccttcgcggtcggcacc
ccgtggagccgcgcctggggcaccacgtggttccacgtcaccggcaccgtgccggacgac
ggggccgcggacgggacggcgctcgaggtgctcgtcgacctcggcttcagcgagcggcag
cccgggttccaggcggagggcctcgtgcaccggccggatggcagcgtcgtgaaggccatc
gagccctacaacgggtacgtgccgctcgccgcgatcggggcgggcaccgcgccgggcacg
cccatcgacctctggatcgaggcggcctcgaaccccgacatcggcggcgactccttccac
ggcgagacgccgctcggcgaccccgccaccgcgggcgacgaccccatctaccggctccgc
acgatggacctcgcctggcgcgacgaggccgtctgggagctcgaccgcgacgtgtggacg
ctgcgggggctgatggcccagctggagccggcgtcgtcccgccgcgccgagatcctcgcg
gcgctcgagcgcatgtgcgacgcggtggatcccgacgacgtcgcgggcaccgccgccgcc
ggccgccgggagctggaggccgtgctcgccgcgcccgcccacgcgagcgcgcaccggatc
accgcggtcggccacgcgcacatcgactcggcgtggctctggcccgtgcgcgagacgcgc
cgcaaggtcgcccgcaccttctccaacgggctcgcgctcatggacgaagatgccgacttc
gtgttcgcggcctccagcgcgcagcagtacgcgtggctgaaggaggaccatccggagctg
ttcgagcggctgcggcggcgcgtggccgagggccgcttcgtgccggtgggcggcatgtgg
gtcgagtcggacacgaacatgccgggcggcgaggcgctcgtccgccagctcgtgcagggc
aagcgcttcttcctcgaggagttcgggatcgacagtcgcgaggtgtggctgcccgactcg
ttcggctacacgggcgcgctgccgcagatcgtgcggggtgcgggtgccgagtacttcttc
acgcagaagcaatcctggaacgagacgaacacgatgccgcaccacacgttcctctgggag
gggatcgacggcagccgcgtcttcacgcacttcccgccggtggactcctacaactccgac
ctctccggggaggacctcgcgcgcgccgagcggcagcacgccgagaaggccgtgagcaac
gcgtccatcgtcccgttcggctggggcgacggcggcggcgggccgacccgcgagatggtc
gcggccgcccaccgcacgcgcgacctcgagggctcgccgcgcgtgcagctcggcacgccg
ctcgagttcttcgacaccgcgagggccgagatccgggatccgcacgtgtggtcgggcgag
atgtacctcgagttccaccgcggcacctacacgtcgcaggcgcgcacgaagcagggcaac
cgacgcagcgagcacctgctgcgggaggcggagctgtggctcgcgacagctgcagtgcgc
gacctcgtcgcctacccgcacgacgagctcgacgcgctctggcgcacggtgctgctgctg
cagttccacgacatcctgccgggcacgtccatcgcctgggtgcaccaggaggccgagcgc
gagcacgcccgcgtgcaggaacggctgcgcgagctcgtcgcagacgcgcagtccgcgctc
gcgggatccggcgaccggcgcgtcgcgttcaacgcggcgcccgtggacgcggcgggcgtc
ggcgcgctgtcggccgcggtcgtggatccgtcgcccgcctcccccgcgcccgtcgtcgac
ggcgacggctggctcctcgacaacggcctcgtccgcgccaggttcgacgccgacggcacg
gtctcctcgctcgtcgacgccgcgtcgggccgcgacctcgtcgcccccggccagcgcctc
ggcctcctccagctgttccgggacaccccgaaccagtgggacgcgtgggacatcgacgac
gcctaccgccgcaaccgcaccgacctcaccgacgtgtcggacgtgcggatcgacggcgcc
gccctcgtggtcgagcgcgccttcggcacctcgcgcgtcacccagacgtggaccgtgccc
gccggcgagccggagctgcaggtggtcaccgacgtcgactggcacgagcggcagaagctc
ctgaagctcgcgttcccgctcgacgtgcacgccgaccgcgccgcgtcggaggtgcagttc
gggcacgtgcagcgcgtcacccacgcgaacacgtcgtgggagaccgcgcgcttcgagacg
gtggcgcaccgctgggtgcacgtgggcgagcccggcttcggcgtcgcagtcgcgaatgac
gcgacgtacgggcacgacgtgacccggatcccccgccccgacggcggcagcgcgaccctc
gtgcgccagtcgctcctgcgcgcgcccgtgttccccgacccgcacgccgaccagggccgg
cacgtgctgcgctccgcggtgcgcgtcgcgcccgacgtgctcgacgccgccgacgcgggc
taccggctcaacctgccggtgcgcgaggtcgcgggcgaccacggggtcgcgccgctcgtc
acgtcgtcgaacgcggccgtcgtgatcgaggccgtcaagctcgccgaggaccgctcgggc
gacctcgtcgtgcggctctacgaggcgcgcggcggccgggagcgcacggtcgtgcgggtg
gatgcggcggccggcctcggcctctcgtcccccaccgacctgctcgagcgcccgctggaa
ggcgcggacgcgcaggcgacgggcgacggcatcgagctgacgctgcggccgttcgagatc
gcgacccttcggttcgcgcgccgctag
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