Clavibacter nebraskensis: CMN_01335
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Entry
CMN_01335 CDS
T02530
Symbol
ffhA
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc02024
Quorum sensing
cmc03060
Protein export
cmc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CMN_01335 (ffhA)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CMN_01335 (ffhA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMN_01335 (ffhA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cmc02044
]
CMN_01335 (ffhA)
Enzymes [BR:
cmc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CMN_01335 (ffhA)
Secretion system [BR:
cmc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CMN_01335 (ffhA)
Eukaryotic Sec-SRP protein
CMN_01335 (ffhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
nSTAND3
AAA_24
Zeta_toxin
MMR_HSR1
AAA_31
APS_kinase
ArsA_ATPase
AAA_18
nSTAND_NTPase7
AAA_33
TsaE
AAA_16
6PF2K
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCE75286
UniProt:
A0AAI8ZHX9
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All DBs
Position
1381973..1383544
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AA seq
523 aa
AA seq
DB search
MATFGTLSDRLAETFKNLRGKGKLSAADVDGTVREIRRALLEADVALDVVKSFTASVRER
ALGGEVSQALNPAQQVVQIVNEELIGILGGQQRRITFAKRPPTVIMLAGLQGAGKTTLAG
KLGKWLAKDGHTPMLVAADLQRPNAVQQLQVVGEQAGVPVFAPEPGNGKGNPVRVAKDAM
KHAVDKQYSVVIIDTAGRLGVDQELMKQASDIRKATDPDEVLFVIDAMIGQDAVATAKAF
QDGVDFTGVVLSKLDGDARGGAALSVASVTGRPIMFASTGEGLDDFEPFHPDRMASRILD
LGDILTLIEQAQQAFDEEEAMEVAQKLASDTFTLDDFLKQMQQLRGKGSLKKMMGMLPGM
GAMKEQLENFDEKEIVRTEAIIQSMTKAERQNPKLLNGSRRLRIARGSGMTVTDVNGLVQ
RFEQASKMMRTVARGGMPQIPGMGPMPGAHSSRKPVQQKKKGSKSGNPAKRAQENAALAS
GQRIGGPAAPAGSGFGLAGAAKGGANGAPSEEELASLQKFLGR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcggaacactctcggaccgcctcgccgagaccttcaagaacctgcgcggc
aagggcaagctcagcgccgcggacgtcgacggcaccgtccgcgagatccgccgcgcgctg
ctcgaggccgacgtcgcgctcgacgtcgtcaagtcgttcaccgcgtccgtccgcgagcgc
gcgctcggcggcgaggtcagccaggcgctgaaccccgcccagcaggtcgtgcagatcgtc
aacgaggagctcatcgggatcctcggcggccagcagcgccgcatcaccttcgccaagagg
ccgccgacggtcatcatgctcgccggcctccagggagcgggcaagacgaccctcgcgggc
aagctcggcaagtggctcgcgaaggacggccacacgccgatgctcgtcgcggccgacctc
cagcgccccaacgccgtgcagcagctgcaggtcgtcggcgagcaggccggcgtccccgtg
ttcgcgcccgagcccggcaacgggaagggcaaccccgtgcgcgtcgccaaggacgcgatg
aagcacgcggtcgacaagcagtacagcgtcgtcatcatcgacacggccggccgcctcggc
gtcgaccaggagctgatgaagcaggcctccgacatccgcaaggccaccgacccggacgag
gtcctcttcgtcatcgacgccatgatcggccaggacgcggtcgcgaccgcgaaggccttc
caggacggcgtcgacttcacgggcgtcgtgctctccaagctcgacggcgacgcgcgcgga
ggagcggccctctcggtcgcctccgtcaccggccggccgatcatgttcgcctccacgggc
gagggcctcgacgacttcgagcccttccaccccgaccgcatggcgagccgcatcctcgac
ctcggcgacatcctcaccctcatcgagcaggcccagcaggccttcgacgaggaggaggcg
atggaggtcgcccagaagctcgcgagcgacaccttcacgctcgacgacttcctcaagcag
atgcagcagctccgcggcaagggctccctcaagaagatgatgggcatgctccccggcatg
ggcgctatgaaggagcagctggagaacttcgacgagaaggagatcgtccgcacggaggcg
atcatccagtcgatgacgaaggccgagcgccagaacccgaagctcctcaacggatctcgc
cgcctccgcatcgcccgcggatccggcatgaccgtcaccgacgtcaacggcctcgtgcag
cgcttcgagcaggcctcgaagatgatgcgcacggtcgcgcgcggcggcatgccgcagatc
cccggcatgggcccgatgcccggcgcgcactccagccgcaagcccgtgcagcagaagaag
aagggctcgaagtcgggcaacccggccaagcgcgcgcaggagaacgcggcgctcgcgtcg
ggccagcgcatcggcggacccgcggcccccgccgggtcgggcttcggcctcgccggggcg
gccaagggcggcgcgaacggcgccccgagcgaggaggagctcgcctcgctgcagaagttc
ctcggccgctga
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