Clavibacter nebraskensis: CMN_01631
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Entry
CMN_01631 CDS
T02530
Name
(GenBank) putative topoisomerase II, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cmc
Clavibacter nebraskensis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmc03032
]
CMN_01631
03400 DNA repair and recombination proteins [BR:
cmc03400
]
CMN_01631
Enzymes [BR:
cmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CMN_01631
DNA replication proteins [BR:
cmc03032
]
Prokaryotic type
DNA Topoisomerases
CMN_01631
DNA repair and recombination proteins [BR:
cmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CMN_01631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
CCE75577
UniProt:
A0AAI9EKD7
LinkDB
All DBs
Position
complement(1704136..1706682)
Genome browser
AA seq
848 aa
AA seq
DB search
MSPSTTNTTPDEPAERIEDVDVSTEMENSFLEYAYSVIYSRALPDARDGLKPVQRRILYQ
MSEMGLRPDRGHVKSARVTGEVMGKLHPHGDSAIYDAMVRMAQPFTLRVPLIDGHGNFGS
LDDGPAAPRYTEARLAASALAMVEGLDEDVVDFVPNYDNAFMQPAVLPAAFPNLLVNGAS
GIAVGMATNMVPHNLIEVVGAARHLIDHPDATLDDLMAFVPGPDLPTGGTIIGLSGVKDA
YLTGRGSFKTRARVSVESLTPRKSGLVVTELPYLVGPEKVIEKIKDGVQNKKLSGITNVT
DLTDRTHGLRLVIEIKTGFNPEAVLEQLYRYTPLEDGFSINNVALVDGSPQTLGLKELLQ
VYVAHRLDVVTRRTRYRLARRQERLHLVLGLLIAILDIDEVIQVIRGSDDTEQARARLMD
VFDLSTLQADYILELRLRRLTRFSRIELEEERDRLQAEIAELEAILADPRRLRALVSTEL
QEVADRFGTPRRTLLTEAAPSVAGAASRRSAPVLEIADVPCRVLLSTTGRAVRVDLPADA
PGTPLQTVRRSSHDAVLTAIETTSRTRIGAITNTGRLITMTPVDLPVVPVASVQLGAGVR
IRDYLGLTDKKERVVALVALGTEEAIALGTRQGVVKRIAPTALPAKPEFEVIALKKGDEV
VGARQGAETDELVFVTSEAQLLHFPAVSVRPQGIQAGGVAGVNLASGARVLFFSSVAPEG
AQVVTVSASSATITGVDPGRAKVSAFGDFPRKGRATGGVRAHAYLKGEDHLALAWVGPGP
ALAVGPAGEVRQLPPTGMKRDGSGIPLEKAIGSVGQAVTPAEAPDAASGAAAGVVEPSAE
DGSAPLET
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagtccctccaccacgaacaccacgcccgacgagcccgccgagcggatcgaggacgtc
gacgtctccaccgagatggagaactcgttcctcgagtacgcctactccgtcatctactcc
cgagccctgccggatgcgcgcgacgggctcaagcccgtgcagcggcgcatcctctaccag
atgagcgagatgggcctccgtcccgaccgcgggcacgtgaagtccgcgcgcgtcacgggt
gaggtgatgggcaagctccacccgcacggcgactcggccatctacgacgcgatggtgcgc
atggcgcagccgttcacgctccgggtgccgctcatcgacgggcacggcaacttcgggtcg
ctcgacgacggacccgcggcgccgcgctacacggaggcccggctggcggcctccgccctc
gcgatggtcgaggggctcgacgaggacgtcgtcgacttcgtcccgaactacgacaacgcg
ttcatgcagccggcggtgctcccggcggccttcccgaacctgctcgtgaacggcgcgagc
ggcatcgccgtcggcatggcgaccaacatggtgccccacaacctcatcgaggtcgtgggc
gccgcgcgtcacctcatcgaccacccggacgccacgctcgacgacctcatggccttcgtg
ccggggcccgacctccccacgggcggcacgatcatcggcctctcgggcgtcaaggacgcc
tacctcacgggccgcggcagcttcaagacccgcgcgcgcgtctccgtcgagagcctcacg
ccgcggaagtcggggctcgtcgtcaccgagctgccgtacctcgtcggccccgagaaggtc
atcgagaagatcaaggacggcgtccagaacaagaagctgtcgggcatcaccaacgtcacc
gacctcaccgaccgcacgcacggcctgcggctcgtcatcgagatcaagacgggcttcaac
ccggaggcggtgctcgagcagctgtaccgctacacgccgctggaggacgggttcagcatc
aacaatgtcgcgctcgtcgacggcagcccgcagacgctcgggctgaaggagctgctgcag
gtctacgtggcgcaccggctcgacgtggtgacgcggcgcacgcgctaccggctcgcccgg
cggcaggaacggctgcacctcgtcctcggcctgctgatcgcgatcctcgacatcgacgag
gtgatccaggtcatccgcggcagcgacgacaccgagcaggcgcgcgcgcggctcatggac
gtcttcgacctctcgacgctgcaggccgactacatcctggagctccgcctgcgccggctc
acgcggttcagccgcatcgagctggaggaggagcgcgaccgcctgcaggcagagatcgcc
gagctcgaggccatcctggctgatccccgccggctccgcgccctcgtctcgaccgagctg
caggaggtcgccgaccgcttcggcacgccgcgccgcacgctgctcaccgaggccgcgccg
agcgtcgcgggggcggcgagccgtcggtcggcgcccgtgctcgagatcgccgacgtcccg
tgccgggtgctgctgtcgaccacgggccgcgcggtgcgggtcgacctgccggccgacgcg
ccgggaacgcccctgcagaccgtccgccgcagctcccatgacgcggtcctcaccgcgatc
gagaccacgagccgcacgcgcatcggcgccatcacgaacaccggccggctcatcaccatg
acgccggtcgacctgcccgtcgtccccgtcgcgagcgtgcagctcggcgccggcgtccgg
atccgtgactacctgggcctcacggacaagaaggagcgcgtcgtcgcgctcgtggcgctc
ggcaccgaggaggcgatcgcgctcggcactcgccagggcgtcgtcaagcgcatcgccccg
accgccctgcccgcgaagcccgagttcgaggtcatcgcgctgaagaagggcgacgaggtc
gtcggcgcgcgacagggcgcggagacggacgagctcgtgttcgtcacgagcgaggcgcag
ctgctgcacttccccgcggtgtcggtgcgtccccagggcatccaggcgggcggcgtcgcc
ggcgtcaacctcgcgtccggcgcacgcgtgctgttcttctcctccgtcgcccccgagggc
gcccaggtcgtgacggtctcggcgtcctccgccaccatcacgggcgtggatcccggccgg
gcgaaggtcagcgcgttcggcgacttcccgcgcaagggccgcgccacgggcggcgtccgc
gcgcacgcgtacctcaagggcgaggaccacctcgccctcgcctgggtcggccccgggccc
gccctcgcggtggggccggccggcgaggtgcggcagctcccgcccacgggaatgaagcgc
gacgggtcgggcatcccgctggagaaggcgatcgggagcgtcggccaggcggtcaccccc
gccgaggcgcccgacgccgcgtccggcgcggccgcgggcgtcgtcgagccgtcggccgag
gacggctccgcgccgctcgagacgtag
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