Clavibacter nebraskensis: CMN_01713
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Entry
CMN_01713 CDS
T02530
Symbol
ctaB
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00190
Oxidative phosphorylation
cmc00860
Porphyrin metabolism
cmc01100
Metabolic pathways
cmc01110
Biosynthesis of secondary metabolites
cmc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CMN_01713 (ctaB)
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CMN_01713 (ctaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cmc01006
]
CMN_01713 (ctaB)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cmc03029
]
CMN_01713 (ctaB)
Enzymes [BR:
cmc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
CMN_01713 (ctaB)
Prenyltransferases [BR:
cmc01006
]
Compound prenylation
Protoheme farnesyltransferase
CMN_01713 (ctaB)
Mitochondrial biogenesis [BR:
cmc03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
CMN_01713 (ctaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
DUF4395
Motif
Other DBs
NCBI-ProteinID:
CCE75658
UniProt:
A0AAI8ZIQ5
LinkDB
All DBs
Position
complement(1791577..1792497)
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AA seq
306 aa
AA seq
DB search
MNVAVQSRVDRETIGVARKTKAYVALTKPRVIELLLVTTAPVMILAQGGWPNPWLILGVL
VGGTLSAGSANAFNCYIDRDIDRVMKRTQRRPLVTGELSDREALVFAWIIGVASILWLGV
ISNWLAAALSLAAILFYVFVYTLWLKRRTPQNIVWGGAAGCMPVLIGWAAVTGDISWAPV
ILFMIVFLWTPPHYWPLSMKYRDDYASVNVPMLAVVRGRAAVGLQTILYAWATLACSLLL
IPVAGMGLVYTLAALAGGGWFVYETHRLYDLAVRHEPIKPMRVFHASISYLSLLFLAVGI
DPLLPF
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgcggtgcagagtcgggtcgatcgggagacgatcggcgtggcgaggaagacc
aaggcgtacgtcgcactgacgaagccgcgggtgatcgagctcctgctcgtgaccacggcg
cccgtcatgatcctcgcgcagggcgggtggccgaacccctggcttatcctcggcgtcctc
gtcggcggcacgctcagcgcgggcagcgccaacgcgttcaactgctacatcgaccgcgac
atcgaccgcgtcatgaagcgcacgcagcgccgtcccctcgtgacgggggagctgtcggac
cgcgaggccctcgtcttcgcctggataatcggcgtcgcgagcatcctgtggctcggcgtc
atctccaactggctggccgcggcgctctcgctcgccgccatcctcttctacgtcttcgtc
tacacgctgtggctcaagcgccgcaccccgcagaacatcgtctggggcggggccgccgga
tgcatgcccgtgctgatcggctgggccgccgtcacgggcgacatctcctgggcgcccgtg
atcctcttcatgatcgtgttcctctggacgccgccgcactactggccgctgtccatgaag
taccgcgacgactacgcctcggtcaacgtccccatgctcgccgtcgtccgcggccgcgcc
gccgtgggcctgcagaccatcctctacgcgtgggccacgctcgcctgctcgctgctgctc
atcccggtcgccggcatgggcctcgtgtacacgctcgccgcgctggcgggcggcggctgg
ttcgtctacgagacgcaccgcctgtacgacctcgcggtgcgccacgagcccatcaagccg
atgcgcgtgttccacgcgtccatctcgtacctctcgctgctgttcctcgcggtcggcatc
gacccgctgctgcccttctga
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