Clavibacter nebraskensis: CMN_01729
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Entry
CMN_01729 CDS
T02530
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMN_01729 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmc03400
]
CMN_01729 (uvrA)
DNA repair and recombination proteins [BR:
cmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMN_01729 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CMN_01729 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_21
AAA_16
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
CCE75674
UniProt:
A0AAI8ZIP5
LinkDB
All DBs
Position
complement(1809747..1812725)
Genome browser
AA seq
992 aa
AA seq
DB search
MAGDPRAVGGVGGDAYDGRVSISPVESSSLLSVRGARVHNLRDVDLDIPRDSLVVFTGLS
GSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRN
PRSTVGTITEIFDYMRLLWARIGVAHCPVCGERISRQTVQQIADQLMELETGTRYQVVSP
IVSQKKGEFVDLFAELASGGYSRAIVDGELIQLSSPPKLKKQYKHDISVVVDRLVASDDI
LGRLTDSLETALRLTDGIVMIDFVDVEGPGGLQTYSEKLSCPNNHPIQLTEIEPRTFSFN
APFGACPECSGLGTRMSVDQELLIGDESLSIADGVILPWTTQGKGLFQYYEKLLAGLARD
LKFSLTTPWRKLSEEVREAVLRGNDFEVQVKWKNRYGREMTYSSGFEGVMPYIERQFAQA
ETDNQRARWGEYLREIPCPVCDGKRLKPEVLAVLVHGANIADVAEMSLSDAQEFMAQLEL
TDREAHIAAQVLREIRVRLEFLIEVGLNYLNLARAAASLSGGEAQRIRLATQIGSGLTGV
LYVLDEPSIGLHQRDNRRLIETLVKLRDLGNTLIVVEHDEDTIRTADWIVDIGPGAGVNG
GKVVHSGSYEGLIENRESLTGDYLAGRRAIATPTKRRKVDRKRQIQVVGARANNLQNVTA
AFPLGTLTAVTGVSGSGKSSLVNDILYRVLANELNGARKVPGKHARVTGLENLDKVVHVD
QNPIGRTPRSNPATYTGVFDRIRTLFAETTEAKARGYLPGRFSFNVKGGRCEACSGDGTI
KIEMNFLPDVYVACEVCGGARYNRDTLSVHYKGKSIAEVLDMSISEAAEFFEPIQAIHRF
MKTLVDVGLGYVRLGQSATTLSGGEAQRVKLSTELQRRSNGRSVYVLDEPTTGLHFEDVR
KLLLVLNGLVDKGNTVIVIEHNLDVIKSADWLIDMGPEGGAGGGTVLATGTPEHLATVPE
SYTGRFLREVFEAEAETAALESSRARPERAAV
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgacccccgcgccgtcggaggtgtcggtggcgacgcatacgatggacgggtg
tcaatctcccccgtcgagtcctcgtccctcctgagcgtccgcggcgctcgcgtccacaac
ctccgcgacgtcgacctcgacatcccgcgcgactcgctcgtcgtcttcacgggcctgtcg
gggtccggcaagtcgtccctcgcgttcgacacgatcttcgccgagggccagcgccgctac
gtcgagtcgctgtccgcgtacgcgcgccagttcctcggccaagtcgaccggccggacgtc
gacttcatcgagggcctgagccccgcggtctccatcgaccagaagtcgacgaaccgcaac
ccgcgctccacggtgggcaccatcaccgagatcttcgactacatgcgcctgctgtgggcg
cgcatcggcgtcgcgcactgccccgtgtgcggcgagcgcatctcccgccagaccgtgcag
cagatcgccgaccagctcatggagctggagaccggcacgcgttaccaggtcgtcagcccc
atcgtgtcccagaagaaaggcgagttcgtcgacctgttcgcggagctcgcctccggcggc
tactcgcgcgccatcgtcgacggcgagctcatccagctcagctcgccgccgaagctcaag
aagcagtacaagcacgacatctcggtcgtcgtcgaccgcctggtcgcgagcgacgacatc
ctcggccgcctgacggactcgctcgagaccgcgctccggctcaccgacggcatcgtcatg
atcgacttcgtcgacgtcgagggccccgggggcctccagacgtactcggagaagctgtcg
tgcccgaacaaccaccccatccagctcaccgagatcgagccgcgcaccttttcgttcaac
gcgcccttcggcgcctgccccgagtgctcgggcctcggcacgcgcatgtcggtggaccag
gagctcctcatcggcgacgagtcgctgagcatcgccgacggcgtcatcctgccgtggacc
acgcagggcaagggcctcttccagtactacgagaagctgctcgcgggcctcgcgcgcgac
ctcaagttctccctcaccacgccctggcggaagctgtccgaggaggtccgcgaggcggtc
ctccgcggcaacgacttcgaggtccaggtcaagtggaagaaccgctacggccgcgagatg
acctactcgtcgggcttcgagggcgtcatgccgtacatcgagcggcagttcgcccaggcg
gagaccgacaaccagcgggcgcgctggggcgagtacctgcgggagatcccatgccccgtg
tgcgacggcaagcgcttgaagcccgaggtgctcgcggtgctcgtgcacggggcgaacatc
gcggacgtcgccgagatgagcctctcggacgcgcaggagttcatggcgcagctggagctc
accgaccgcgaggcgcacatcgccgcgcaggtgctccgggagatccgcgtgcgcctcgag
ttcctcatcgaggtggggctcaactacctcaacctggcgcgggcggcggcgtcgctctcg
ggcggcgaggcgcagcggatccgcctggccacgcagatcggctcggggctcacgggcgtg
ctctacgtgctggacgagccgtccatcggcctgcaccagcgcgacaaccggcgcctcatc
gagacgctcgtgaagctgcgcgacctcggcaacacgctcatcgtcgtcgagcacgacgag
gacaccatccgcacggccgactggatcgtcgacatcggtcccggcgccggcgtcaacggc
ggcaaggtcgtgcactcgggctcgtacgaggggctcatcgagaaccgcgagtcgctcacg
ggcgactacctcgcgggacgccgtgccatcgccacgcccacgaagcgccgcaaggtcgac
cggaagcgccagatccaggtcgtgggcgcgcgcgccaacaacctgcagaacgtcacggcg
gccttcccgctcggcaccctcacggccgtcacgggcgtcagcggatccggcaagtcgtcg
ctcgtgaacgacatcctctaccgggtgctcgccaacgagctcaacggcgcccgcaaggtg
ccgggcaagcacgcgcgcgtcaccgggctcgagaacctcgacaaggtcgtccacgtcgac
cagaaccccatcggccgaacgccccggtcaaacccggccacgtacacgggcgtgttcgac
cggatccgcaccctcttcgccgagaccaccgaggccaaggcgcgcgggtacctccccggc
cgcttcagcttcaacgtcaagggcgggcgctgcgaggcgtgctcgggcgacggcaccatc
aagatcgagatgaacttcctgcccgacgtgtacgtggcctgcgaggtctgcgggggagcg
cggtacaaccgcgacaccctgagcgtccactacaagggcaagagcatcgccgaggtgctc
gacatgtccatcagcgaggcggcggagtttttcgagccgatccaggccatccaccgcttc
atgaagacgctggtggacgtgggcctcggctacgtgcgcctcggccagagcgccaccacg
ctctccggcggcgaggcgcagcgcgtcaagctgtccacggagctgcagcgccggtcgaac
ggccggagcgtctacgtgctcgacgagccgaccaccggcctccacttcgaggacgtgcgg
aagctcctcctcgtgctcaacgggctggtcgacaagggcaacaccgtcatcgtcatcgag
cacaacctcgacgtcatcaagtccgccgactggctcatcgacatggggccggagggcggc
gcgggcggcggcacggtgctcgccaccggcacgcccgagcacctggccaccgtgcccgag
agctacacgggcaggttcctccgcgaggtgttcgaggccgaggccgagaccgccgcgctc
gagtcctcgcgtgcgcgcccggagcgcgccgccgtctga
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