Clavibacter nebraskensis: CMN_01788
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Entry
CMN_01788 CDS
T02530
Symbol
secF
Name
(GenBank) Cmm ortholog CMM_1811; Cms ortholog CMS_0721
KO
K03074
preprotein translocase subunit SecF
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc03060
Protein export
cmc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CMN_01788 (secF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CMN_01788 (secF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cmc02044
]
CMN_01788 (secF)
Secretion system [BR:
cmc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CMN_01788 (secF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
Sec_GG
ACR_tran
DUF5693
DUF2545
Motif
Other DBs
NCBI-ProteinID:
CCE75733
UniProt:
A0AAI8ZIW3
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All DBs
Position
complement(1879222..1880232)
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AA seq
336 aa
AA seq
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MAGFSEFGNDLYTGKRSFDIVGRRRLWYSIAAICILVSILGPLLRGGFTFGIEFTGGSEY
TVSGVQSQSQDIASEAVATVTPVPARVSSVGSDAVRVQTDQLQPADSNAVRQALATAYGV
ETSSVTESFIGPSWGQDITRQALWGLVVFLALAAVVMSVYFRTWKMSVAAIVALLHDLVL
TAGIYGITGFEVTPAAVIGFLTILGYSLYDTVVVFDKIRENTAEDGQESRRTFGQSVNLA
VNQTLVRSINTSIVAILPVGSILFIGAVVLGAGTLRDIALSLFIGIIVGTYSTIFIAAPL
YAHLRESEPKVKRGDALAASAASRAQAERAAVTVES
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggctggcttctccgagttcggcaacgacctctacacgggcaagcgctcgttcgacatc
gtcggccgccgccgcctctggtactcgatcgcggcgatctgcatcctcgtctccatcctc
ggtccgctgctgcgcggcggcttcacgttcgggatcgagttcacgggcggatccgagtac
acggtgagcggcgtgcagtcgcagtcgcaggacatcgcgagcgaggcggtcgcgaccgtg
acgcccgttccggcgcgcgtctcgtccgtcgggtcggacgccgtccgcgtccagaccgac
cagctccagcccgcggacagcaacgcggtccgccaggcgctcgcgacggcgtacggcgtc
gagacgtccagcgtcaccgagtccttcatcgggccgtcgtggggtcaggacatcacgcgc
caggcgctctggggcctcgtggtcttcctcgcgctggccgcggtcgtcatgtcggtctac
ttccgcacgtggaagatgtccgtggccgcgatcgtcgccctcctgcacgacctcgtcctc
accgcgggcatctacgggatcacgggcttcgaggtcacgccggcagccgtcatcgggttc
ctcacgatcctcgggtactccctctacgacaccgtcgtggtgttcgacaagatccgcgag
aacaccgcggaggacgggcaggagtcgaggcgcaccttcgggcagtcggtgaacctcgcg
gtgaaccagaccctggtccgctcgatcaacacctcgatcgtcgccatcctcccggtcggc
tcgatcctcttcatcggcgccgtcgtcctcggcgccgggacgctgcgggacatcgcgctg
tcgctgttcatcggcatcatcgtcggcacctactcgacgatcttcatcgcggccccgctg
tatgcgcacctccgcgagagcgagcccaaggtgaagcggggcgatgccctcgccgcctcg
gccgcgagccgcgcccaggccgagcgcgccgccgtgacggtggagtcgtga
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