Clavibacter nebraskensis: CMN_01839
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Entry
CMN_01839 CDS
T02530
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00470
D-Amino acid metabolism
cmc00550
Peptidoglycan biosynthesis
cmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CMN_01839 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMN_01839 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmc01011
]
CMN_01839 (murD)
Enzymes [BR:
cmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CMN_01839 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cmc01011
]
Precursor biosynthesis
Amino acid ligase
CMN_01839 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
F420_oxidored
YuA_Gp49
Pyr_redox_2
GntR
2-Hacid_dh_C
NAD_binding_7
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
CCE75784
UniProt:
A0AAI8ZIY1
LinkDB
All DBs
Position
complement(1932767..1934311)
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AA seq
514 aa
AA seq
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MTDAPLDDGRALARPDSLHSWHDDWTGLRVAVLGLGRTGFSVADTLIELGADVLVVAADA
SPERLALLDVIGGRLVRPTDEEPVPAELVAFAPELVVVSPGYAPAHPLPAWATEAGLPLW
GDIELAWRVRDKTGTPAEWITITGTNGKTTTTQLTAALLQEGGVRAVPCGNIGLPVLDVV
RHPDGFDVLVVELSSHQLHYMREVRPYSSAFLNLADDHLEWHGSRQAYAAAKGRVYADTR
VACVYNRADRATEDAVREADVQDGARAIGFGLDAPGPSDLGIVDGILCDRAFLEERFTSA
LELTTLDELRAVGLAAPHIVQNILAAAALARSYGVSPAVVRQALQRFELDSHRIERIGER
DGVAFVDDSKATNPHAASASLAAFPSVVWLVGGLLKGVELDELIRAHAPRLRAAVVIGVE
RAKVLAAFARHAPDVTVLEVAESDTEEVMRSAVRLAAGVAREGDTVLLAPAAASMDQFTD
YADRGRRYRAAVDHHLGGAADDTAPENDADPSRG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgctcccctcgacgacggccgggcgctcgcgcgacccgactccctgcacagc
tggcacgacgactggaccgggctccgcgtcgccgtcctcggcctcgggcgcacgggcttc
tccgtcgccgacacgctgatcgagctcggcgcggacgtgctcgtggtcgcggccgacgcg
tcgccggagcggctggcgctgctcgacgtcatcggcgggcgcctggtccggcccaccgac
gaggagcccgtgcccgcggagctcgtggcgttcgcgcccgagctcgtcgtcgtgtcgccc
ggctacgcgcccgcgcacccgctgcccgcctgggcgacggaggcggggctcccgctgtgg
ggcgacatcgagctcgcctggcgcgtgcgcgacaagaccgggacgccggccgagtggatc
acgatcacgggcaccaacggcaagaccaccaccacgcagctcacggccgcgctcctgcag
gagggcggcgtgcgtgccgtgccgtgcgggaacatcggcctgcccgtgctcgacgtcgtg
cgccatcccgacggcttcgacgtgctcgtcgtcgagctctccagccaccagctgcactac
atgcgcgaggtgcggccgtactcgagcgccttcctcaacctcgccgacgaccacctcgag
tggcacgggtcccgccaggcgtacgccgccgccaagggccgcgtctacgcggacacgcgc
gtggcctgcgtctacaaccgcgccgaccgcgccaccgaggacgcggtccgcgaggcggac
gtgcaggacggcgcgcgcgccatcggcttcggcctcgacgcgccgggtccgagcgacctc
ggcatcgtcgacgggatcctctgcgaccgcgccttcctcgaggagcgcttcaccagcgcc
ctggagctgacgacactcgacgagctgcgcgcggtcggcctcgcggcaccgcacatcgtg
cagaacatcctcgccgcggccgcgctcgcccggtcctacggcgtctcgccggcggtcgtg
cggcaggcgctccagcgcttcgagctcgacagccaccgcatcgagcggatcggggagcgc
gacggcgtcgcgttcgtcgacgactcgaaggcgacgaacccgcatgccgcgtccgcgtcg
ctcgcggcgttcccctccgtggtgtggctcgtcggcggcctcctcaagggcgtggagctc
gacgagctgatccgcgcccacgcgccgcgcctgcgcgccgccgtcgtcatcggcgtcgag
cgcgccaaggtgctcgcggcattcgcgcgacacgcgcccgacgtgaccgtcctcgaggtg
gccgagagcgacactgaggaggtcatgcggtccgccgtgcggctcgcggcgggcgtggcc
cgggagggcgacaccgtcctcctggctccggcagcggcatccatggaccaattcaccgac
tacgccgatcgcggacgccgataccgggccgcggtcgaccaccacctgggaggtgcggcg
gatgacactgcccccgagaacgacgcggacccctcgcgcggctga
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