Clavibacter nebraskensis: CMN_01870
Help
Entry
CMN_01870 CDS
T02530
Name
(GenBank) polyamine ABC transporter, substrate binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMN_01870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmc02000
]
CMN_01870
Transporters [BR:
cmc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CMN_01870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
DUF6491
Motif
Other DBs
NCBI-ProteinID:
CCE75815
UniProt:
A0AAI8ZIY2
LinkDB
All DBs
Position
1969580..1970746
Genome browser
AA seq
388 aa
AA seq
DB search
MIPRRSLLALAAAASAAVALAGCAPTTSTQAQAQNHAVTDASGTARVFISGDTNVQALWD
DGIIPAFEKANPGASVTTTLDLHGQHDAQTMATLTSSVQGGSDPGYDLIDAGFTAAAGTG
GLLAPVSADTIPNLATVPDATVQSGGGFGIPYRASSVLLAYDSTKVTDPPKTLSGLLSWI
RANPGQFAYNSPSTGGSGAAFVTTVLDTHVDDATREKMTTGYDQSLEGAWDAGFDELKDL
NSSMYQGGVYPNGNNQVLDLLGTGAIEMAPVWSDQVITAQKAGTLPATVKYAQISDPAFT
GHASFLGIPKTAEHADVAQKLADYVLSAEGQAIIASTIAGYPVISLDQVPADLKDQFASA
DPSTLRPGYYSQMASDMSNLWDQKVPGQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgatcccccgccgttccctcctcgccctcgccgccgccgcgtccgccgcggtcgcgctc
gcgggctgcgctcccaccacgagcacacaggcccaggcccagaaccacgccgtcaccgac
gcatcgggcaccgcccgcgtcttcatctccggcgacaccaacgtccaggccctctgggac
gacgggatcatccccgcgttcgagaaggcgaaccccggcgcctccgtcaccacgacgctc
gacctgcacggccagcacgacgcgcagaccatggccacgctcacgagctcggtgcagggc
ggatccgaccccggctacgacctcatcgacgcgggcttcacggccgcggccggcaccggc
gggctcctcgcgcccgtctcggccgacaccatcccgaacctcgcgaccgtgcccgacgcg
accgtgcagtccggcggcggcttcgggatcccctaccgcgcctcctccgtgctgctcgcc
tacgactccacgaaggtgaccgacccgccgaagacgctctccggcctgctctcctggatc
cgggccaaccccggccagttcgcctacaactccccctccaccggcggatccggcgcggcc
ttcgtcacgaccgtcctcgacacccacgtcgacgacgccacgcgcgagaagatgacgacc
ggctacgaccagtcgctcgagggcgcgtgggacgcgggcttcgacgagctcaaggacctg
aactcgtccatgtaccagggcggcgtctaccccaacggcaacaaccaggtgctcgacctg
ctgggcacgggcgccatcgagatggcccccgtctggagcgaccaggtcatcacggcccag
aaggcgggcacgctgcccgcgaccgtgaagtacgcgcagatctccgacccggcattcacg
ggccacgcgtccttcctcggcatcccgaagacggccgagcacgccgacgtggcgcagaag
ctcgccgactacgtgctctccgccgagggccaggccatcatcgcgagcaccatcgcgggc
taccccgtcatctcgctcgaccaggtacccgcggacctgaaggaccagttcgcctcggcc
gacccgtcgacgctccgtcccggctactacagccagatggcgtcggacatgtcgaacctc
tgggaccagaaggtccccggccagtga
DBGET
integrated database retrieval system
