Clavibacter nebraskensis: CMN_02034
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Entry
CMN_02034 CDS
T02530
Name
(GenBank) DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CMN_02034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmc03400
]
CMN_02034
Enzymes [BR:
cmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CMN_02034
DNA repair and recombination proteins [BR:
cmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CMN_02034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CCE75976
LinkDB
All DBs
Position
2142546..2143493
Genome browser
AA seq
315 aa
AA seq
DB search
MDSPGAAAHVDRTVLEVPGPFDGGGVIRFLSWHAVAGAEEGDDTSFTQSARLARGAGTVT
VRLLDADDATAPSADAVTRVEVTTRVEHAADAPELLGGTRRLLGLDVDAARIDADLARDP
ALAAAVRATPGLRIPGTLDPRSTLFRTVVGQQISVASARATHGRMTADLGEDLPASVAHG
SVTRLPPTAARIARDGAELLRGPARRTATLIRIAEALESGELAIEHGMPRAELRAALVAF
HGVGPWTADYVAMRALGEPDILLSGDLIVRRGAAALGLPDEARALDARAAAWSPWRSYAT
LHLWRVMTDGMPAAG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggactcccccggcgccgccgcgcacgtcgaccgcacggtgctcgaggtccccggtccc
ttcgacggcggcggcgtgatccgcttcctctcctggcacgcggtcgcgggcgccgaggag
ggcgacgacacgtccttcacgcagtccgcgcgactcgcgcgcggcgcggggacggtgacc
gtgcggctgctcgacgcggacgacgccaccgctccgagcgccgacgccgtcacgcgcgtc
gaggtcaccacccgcgtcgagcacgccgccgacgcccccgagctcctcggcggcacgcgc
cgcctgctcggcctcgacgtggacgcggcccgcatcgacgccgacctcgcccgcgacccc
gcgctcgccgccgccgtgcgcgcgaccccgggcctccggatccccggcacgctggatccg
cgctccacgctcttccgcaccgtcgtcggccagcagatctccgtcgccagcgcccgcgcc
acccacggccgcatgacggccgacctcggcgaggacctgcccgcgtccgtggcgcacgga
tcggtgacccgcctgccgccgaccgccgcccgcatcgcccgcgacggcgccgagctgctg
cgcggtcccgcccggcgcacggccacgctgatccgcatcgccgaggcgctcgagagcggc
gagctcgcgatcgagcacggcatgccccgcgcggagctccgggccgcgctcgtcgcgttc
cacggcgtcggaccctggacggcggactacgtcgcgatgcgcgcgctcggcgagcccgac
atcctgctctccggcgacctcatcgtccgccgcggggccgccgcgctcggcctccccgac
gaggcgcgcgccctcgacgcccgcgccgccgcgtggtcgccgtggcgctcctacgcgacc
ctgcacctctggcgcgtcatgaccgacgggatgccggccgcgggctga
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