Clavibacter nebraskensis: CMN_02074
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Entry
CMN_02074 CDS
T02530
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00052
Galactose metabolism
cmc00511
Other glycan degradation
cmc00600
Sphingolipid metabolism
cmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CMN_02074 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
CMN_02074 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CMN_02074 (lacZ)
Enzymes [BR:
cmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
CMN_02074 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2_N2
Glyco_hydro_2
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
CCE76016
UniProt:
A0AAI9EJP6
LinkDB
All DBs
Position
2183807..2186875
Genome browser
AA seq
1022 aa
AA seq
DB search
MTHALPYFEDFAPTTGPARRPRSCLHSDAPRIVLNGDWRFRLSPTPRGLSDEMADPAFDD
SGWDEIPVPSHWVLGQDGRFGLPAYTNVQYPFPVEPPYVPDENPTGDYRVEIDVPTDWQS
LERVVLRFEGVESAFKVWLNGDEVGTAMGSRLSHEFDVTASLRPGSNVLAVRVHQWSIAS
YLEDQDQWWMPGIFRDVTLLGRPQGGIDDAWTRAEYDHETGAGTVHVEVDAEPAAFPVTL
EVEDLGIHVTWATPEDVAPVHVDRVEPWSAESPTQYQGFLRTNVEALSIRLGFRTVRIEG
DRFLVNGRRVVFHGVNRHEAHPERGRVFDEEHARADMMLMKQHNVNAIRTSHYPPHPRVL
DLADELGFWVIDECDLETHGFEFGGWVGNPSDDPRFADHYLDRIERTVERDKNHPSIVMW
SLGNESGTGRNLAAMSAWVHRRDPGRPVHYEGDYTGEYTDVYSRMYSNLQETESIGSDVI
PGDLLGCTPGEGMRQRTKPFILCEYVHAMGNGPGQIGEYEDLVLRYPRLHGGFVWEWRDH
GILTETADGEASYAYGGDFGEVLHDGNFVMDGMVLPDDTPTPGLAEYKAVVQPIAFGLER
DGGSASLVVENRYHSVSTALTSLVWVLAVDGDDIATGVLDAEPVVAGATARIPMPADALD
AGELAAARERGPAPEVWLTVQAILRDDEPWAEAGHVVAVQQFDLTPAPRPAVPARWLDAD
EETYPDAGATRLALGDGEFDLATGRLVRLGGLEVDGPRLELWRAPTDNDRSDSSGSYELA
DPRLTFGKGVPGPSSEARWRDAGLDRLTHRVRSVKVGSGSLTVVVRTSAAQSFDSVDTTY
CWTEGVDGDLDLRVDIVPSAGWAITWPRVGIRIDLPASVTNAEWFGTGPFESYPDSRRAA
LVGRFSSLVDDLGAVYSTPQETGHRSDLRELELGTFDGEHGIVIAARPDTAGRRPGFTAS
RHTPQELDRAAHPHELPASEAVHLYIDAAQHGLGSRACGLDVLPEHQLWPSARTLELTIR
SR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgccctcccctacttcgaggacttcgcccccacgacgggcccggcccgccgt
ccccgttcctgcctgcactcggatgccccgcgcatcgtgctgaacggcgactggcggttc
cgcctctcccccaccccccgcggcctctccgacgagatggccgacccggcgttcgacgac
tccggctgggacgagatcccggtgccgagccactgggtgctcggccaggacggccgcttc
ggcctccccgcctacacgaacgtgcagtacccgttccccgtcgagccgccgtacgtgccc
gacgagaaccccacgggcgactaccgcgtcgagatcgacgtgccgacggactggcagtcg
ctcgagcgcgtcgtgctccgcttcgagggcgtcgagtcggcgttcaaggtgtggctgaac
ggcgacgaggtcggcaccgcgatgggctcgcgcctctcgcacgagttcgacgtcacggcg
tcgctgaggcccggatccaacgtgctcgccgtgcgcgtgcaccagtggtcgatcgccagc
tacctcgaggaccaggaccagtggtggatgcccggcatcttccgcgacgtcaccctcctc
ggccgtccccagggcggcatcgacgacgcgtggacccgcgccgagtacgaccacgagacg
ggcgcgggcaccgtgcacgtcgaggtcgacgccgagcccgccgcgttccccgtgaccctc
gaggtcgaggacctcgggatccacgtcacctgggccacgcccgaggacgtcgcgcccgtg
cacgtcgaccgcgtcgagccgtggagcgccgagagccccacgcagtaccagggcttcctc
cgcacgaacgtcgaggcgctgtcgatccgcctcggcttccgcaccgtgcgcatcgagggc
gaccgcttcctcgtcaacggccgccgcgtggtcttccacggcgtcaaccggcacgaggcc
caccccgagcgcggccgcgtcttcgacgaggagcacgcgcgcgccgacatgatgctgatg
aagcagcacaacgtcaacgcgatccgcaccagccactacccgccgcacccccgcgtgctc
gacctcgccgacgagctcggcttctgggtcatcgacgagtgcgacctcgagacgcacggc
ttcgagttcggcggctgggtcggcaacccgagcgacgacccgcggttcgcggaccactac
ctcgaccgcatcgagcgcaccgtcgagcgcgacaagaaccacccctccatcgtcatgtgg
tcgctcggcaacgagtcgggcaccgggcgcaacctcgccgccatgtcggcgtgggtacac
cgccgcgacccgggccggcccgtgcactacgagggcgactacacgggcgagtacaccgac
gtctactcgcgcatgtactcgaacctgcaggagaccgagtccatcggcagcgacgtgatc
ccgggcgacctgctcggctgcacgcccggcgagggcatgcgccagcgcaccaagcccttc
atcctgtgcgagtacgtgcacgcgatgggcaacggccccggccagatcggcgagtacgag
gacctcgtgctccgctacccgcgcctccacggcgggttcgtctgggagtggcgcgaccac
ggcatcctcaccgagaccgcggacggcgaggcgtcctacgcctacggcggcgacttcggc
gaggtcctccacgacggcaacttcgtgatggacggcatggtcctccccgacgacaccccc
acgcccggcctcgccgagtacaaggccgtcgtgcagccgatcgcgttcgggctcgagcgc
gacggcggatccgcgtccctcgtcgtcgagaaccggtaccactccgtctccaccgcgctc
acgagcctcgtctgggtgctcgcggtcgacggcgacgacatcgcgaccggcgtcctcgac
gccgagcccgtcgtggccggcgcgaccgcgcggatcccgatgcccgccgacgcgctcgac
gccggcgagctcgccgccgcccgcgagcgcggccccgcccccgaggtgtggctcacggtg
caggcgatcctccgcgacgacgagccgtgggccgaggccggccacgtggtcgccgtgcag
cagttcgacctcacgcccgcgccgcggcccgccgtgcccgcgcgctggctcgacgccgac
gaggagacgtacccggacgccggcgccacgcgcctcgccctcggcgacggcgagttcgac
ctggccaccggccgcctcgtacgcctcggcggcctcgaggtcgacggcccgcgcctcgag
ctctggcgcgcgcccaccgacaacgaccgcagcgacagcagcggctcctacgagctggcg
gatccgcgcctcaccttcgggaagggcgtacccgggccgtcgagcgaggcgcgctggcgc
gacgcgggcctcgaccggctgacccaccgggtccgctcggtgaaggtcggctccggctcg
ctcacggtcgtcgtgcgcacgagcgccgcgcagtccttcgactcggtcgacacgacgtac
tgctggaccgagggcgtcgacggcgacctcgacctgcgcgtcgacatcgtgccgagcgcc
ggctgggccatcacgtggccgcgcgtggggatccgcatcgacctccccgcgagcgtcacc
aacgcggagtggttcggcacgggcccgttcgagtcgtaccccgactcgcgccgcgcggcc
ctcgtcggccggttctcgtcgctcgtcgacgacctcggcgccgtgtactcgacgccgcag
gagaccggccaccgcagcgacctgcgcgagctcgagctcggcacgttcgacggcgagcac
ggcatcgtgatcgcggcccggcccgacaccgcgggccgccgccccggcttcacggcctcg
cgccacacgccgcaggagctcgaccgcgcggcgcacccgcacgagctgcccgcgagcgag
gcggtgcacctgtacatcgacgccgcgcagcacgggctcggatcccgcgcgtgcggcctc
gacgtgctgcccgagcaccagctctggccgtcggcccgcacgctggagctgacgatccgc
agccgctga
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