Clavibacter nebraskensis: CMN_02111
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Entry
CMN_02111 CDS
T02530
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cmc
Clavibacter nebraskensis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmc03016
]
CMN_02111 (truB)
Enzymes [BR:
cmc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CMN_02111 (truB)
Transfer RNA biogenesis [BR:
cmc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CMN_02111 (truB)
Prokaryotic type
CMN_02111 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CCE76052
UniProt:
A0AAI8ZJG2
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All DBs
Position
complement(2224536..2225495)
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AA seq
319 aa
AA seq
DB search
METPTPRAAPSTASGLLLIDKRGEWTSHDLVARTRRLAGTRKVGHAGTLDPMATGLMILG
VNSSTRLLTYLVGLDKEYLATIRLGRATTTDDREGEVVSRAEPGRIRDLAVADVERAIAD
LRGTISQVPSAVSAIKVDGKRAYARVRAGEEVELAAREVTVSAFDVLRFDAVEAEEGEED
GAQLDLSVRITCSSGTYVRALARDLGRALGVGGHLTALRRTRVGPFHVDDAVAIDDMVVA
DRLIPPADAAACLFDVLHLTDQEAVDLGHGKKLTTPDEAPTEDPLAAVAPDGRLVGLVGF
RGRTGTSIVNFPADEAGAS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccgaccccccgcgccgcgccctcgaccgcgagcggcctgctgctcatcgac
aagcgcggggagtggacgagccacgacctcgtcgcccgcacgcgccgcctcgcgggcacc
cgcaaggtcgggcacgcgggcacgctcgacccgatggcgaccggcctcatgatcctcggc
gtcaacagctccacgcgcctgctcacctacctcgtcggcctcgacaaggagtacctggcg
acgatccgcctcggccgcgccaccaccacggacgaccgggagggcgaggtcgtctcgcgc
gccgagcccggccggatccgcgacctcgccgtcgccgacgtggagcgcgccatcgccgac
ctccgcggcaccatctcgcaggtgccgagcgccgtgagcgccatcaaggtcgacggcaag
cgcgcctacgcccgcgtccgcgccggcgaggaggtcgagctcgccgcgcgcgaggtcacc
gtctcggcgttcgacgtgctgcgcttcgacgcggtcgaggccgaggagggcgaggaggac
ggcgcccagctcgacctctccgtgcggatcacctgctcctcgggcacctacgtgcgcgcc
ctcgcgcgggacctcggccgcgcgctcggcgtcggcggccacctcacggcgctccgccgc
acgcgcgtcggccccttccacgtggacgacgccgtcgcgatcgacgacatggtcgtcgcc
gaccgcctcatcccgccggcggacgccgccgcgtgcctcttcgacgtgctgcacctcacc
gaccaggaggccgtcgacctcgggcacggcaagaagctcacgacgcccgacgaggcgccc
acggaggatccgctcgccgcggtcgcgcccgacggccgtctcgtggggctggtcggcttc
cgcggccgcaccggcacgtccatcgtcaacttcccggcggacgaggcgggcgcgtcgtga
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