Clavibacter nebraskensis: CMN_02136
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Entry
CMN_02136 CDS
T02530
Name
(GenBank) conserved secreted protein, putative RTX toxin
KO
K20276
large repetitive protein
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMN_02136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
Motif
Other DBs
NCBI-ProteinID:
CCE76077
UniProt:
A0AAI9EJR6
LinkDB
All DBs
Position
complement(2258386..2264394)
Genome browser
AA seq
2002 aa
AA seq
DB search
MIRAWIRRHRQAATTVTGGAVVLALLTGFALVSDGYQAQRVDLDDGSVWVVNSAQQAIGR
ANTAVLELDSVVDSRSEDIDVLQAGSTVLLADRGSSRLDMVDDATSEVVDTAPLPAGAEV
MLAGSRAAILVPATGQLWLVPVAGLSAFDAASAPTLILGADAVASMGDDGTLLVYSAVTG
TLSRIQADTDDTVRATVDVGPVGAPLAEPADAPADPAAALAGETVQAGDPGRPAGQRLAL
TSVDGHWALYDADARALLVDGRTVDLAGSVAADARVALQRASSGGSGVLVAHSGGLVEVP
VAGGDPVVVSGDARGEPARPVRVAGCEYAGWTGGSGWQRCLAPAAMAGEGGQDARRTAAG
ATSGIGSMPQQAALRFVVDGARVVLNDTRGGTAWAVQRDAGLIDNWSDLIDRDRSDTVVE
QNTADTPPETDRVQQPPVAVDDDLGARPGRTTALPVLLNDHDPNGDVLVIDSVTPVDAEV
GAVDIVDEGQGLQLALAAGATGTVRFSYVVSDGRGGTATADVRVAVRSAGENGPPVQARP
ATGTVAEGDRLRTDVLGGWYDPDGDPVYLTRASVPAPDAVSWKPEGRVVYTDAGAGGDTR
TVALQVSDGREEGSGELVVTVRRAGDVPLVAEGFVVQASLGREITVEPLTHARGGSGAIR
LAAVSARAGLQITPDLEAGTFRLEGGQAGTHLVEYTVTDGRTTATGVVRVEVRGAPAADG
RPVTVPHTVFVRALQAQDVDVLQADFDPAGGVLVITDAVSPDEAVGVHAEVVGQRLVRIS
LTRPLDGPVDVAYRVSNGVAEATGVITVIEVPEPAVRQPPVATDDRVAVRVGDAVDIPVL
ANDEQPDGDRLRLDPVLVDPLPDGAGLLFASEDRLRYLAPDRTGDYTAVYRAVAPDGQWA
TATLTVSVREADVATNAAPVPRPLTARVLAGETVRIPVPLTGIDPDGDSVRLLGQDTGPE
KGQVVEVGPDWIDYQAGDYSTGTDAFAYAVVDGLGARATGTIRVGISTRVEGARNPVATA
DTVTVRPGRVLRVQVLANDTDPDGGALSLVSVQPQAEGLVAGLDGDTVRVVAPEQAGRYG
FVYGVRNARGGSDEAFLTVIVDPAAPPTRPVARDTVLQLSDVLDRSSVDVDVMRNVFSAE
GDASSLVLGVGAGYEDVARVTPDGRIRVEVGDERRIVPFTVAQPDDPSISATAFVWVPGF
ADTLPQLRAGQPRPTVASGERLVVELDEQVVAAGGRAVRIADPNALSATHADGPVELVDE
DTIAYRSEPGYFGPAAISFTVTDGSGDGGRTAALVLPITVTPTENQPPVFTGAVIDLEPG
QSKDVDLGRLTTYPYQDDRGQLAFALEGAVAAGFRASVDGGTLRISADEGVATGQAASFP
VSVRDATQTGRAGRVDLRVVPSTRPLAQPATDEGTVTRGSATSVDVLANDQAGNPFPGTP
LTVTSIRGADGASLPAGVTVTPSADRATLAVSAAADAAPGDVRVQYEVRDATGDAGRAAF
GTVVIHVQDRPGPVTALRASGFADRSVTVAFEPGVFNGSAITGYQVRVLRGGTATATVTC
PSTTCTVPTPGNGPGSSVEVEVSAVNGVGVSDPVSISGLWSDVLPAAPAGLAVEPLVDGL
RLSWQPSVVPSSSSPVTQYVVGVGGITRQVAADATSLEVRDPSLVAEVPVAVSVAARNSA
QVQDASAWLAATAIGTPRGAPTATGAPTAVADPADETRVTVSWPAFQGQGVDGIRYLVAA
YAPGSAPSCSVPTEGVAPWSAQHGPAVDVGSATSHVFTGLATDQPVAFAVLAANSQGCTV
VEAGQLTPRTAPSTPVVTVDLPRADRGSDGVFRAVLAGARYRPGSASASAQLLYRVDGQG
DGVPVGVGQALTLPRTGVGATIQVRVVEDSGDGRPRSSGWSDPVSAGTAVDARAGDVRAA
TDEAGATTFSWTSMPPAVAGFGRIGDGGGYARSERRCGGQGAWTDASSGAAGSCTVPAGG
ERILEVRVTANSGTLYTYAHRG
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgcgtggatccgccgccaccgccaggccgcgacgaccgtcaccggcggggcc
gtcgtgctcgcgctcctcacgggcttcgcgctcgtctccgacggctaccaggcgcagcgc
gtcgacctcgacgacggatccgtgtgggtcgtcaactccgcgcaacaggccatcggccgc
gccaacacggccgtgctcgagctcgacagcgtggtcgactcccgcagcgaggacatcgac
gtgctgcaggccggatccaccgtgctgctcgccgaccgcggcagctcgcgcctcgacatg
gtcgacgacgcgacgagcgaggtggtcgacaccgcgccgctgcccgcgggcgccgaggtc
atgctcgcgggatcccgcgccgcgatcctcgtgccggcgaccggccagctgtggctcgtg
cccgtcgcgggcctctccgcgttcgacgccgcgagcgcgcccacgctgatcctcggggcc
gacgccgtcgcgtcgatgggcgacgacggcacgctcctcgtgtactcggccgtgacgggc
acgctgtcgcgcatccaggccgacacggacgacaccgtgcgggcgaccgtggacgtcggc
cccgtcggcgcgcccctggcggagccggccgacgcgcccgccgaccccgctgccgccctc
gccggcgagaccgtgcaggcgggggatcccggacgccccgccgggcagcgcctcgcgctc
acctccgtcgacggccactgggcgctctacgacgccgacgcgcgcgccctcctcgtcgac
ggccggacggtcgacctcgccggatccgtggccgccgacgcgcgcgtcgcccttcagcgc
gcgtcgtcgggcggcagcggcgtgctcgtcgcgcactcgggcgggctcgtcgaggtgccc
gtcgcgggaggggatccggtcgtcgtgagcggcgacgcgcgcggcgagcccgcgcgtccc
gtccgcgtcgccggctgcgagtacgcgggctggaccggcggatccggctggcagcgctgc
ctcgccccggcggccatggcgggcgagggcgggcaggacgcccggcgcacggcggcgggc
gcgacgagcggcatcggatccatgccgcagcaggccgccctgcgcttcgtggtcgacggc
gcgcgcgtcgtgctcaacgacacgcgcggcggcaccgcctgggccgtgcagcgcgacgcg
ggcctcatcgacaactggtcggacctcatcgaccgcgaccgctccgacaccgtcgtcgag
cagaacaccgcggacaccccgcccgagaccgaccgcgtgcagcagccgcccgtcgcggtc
gacgacgacctcggcgcgcgccccggccgcaccaccgcgctgcccgtgctcctcaacgac
cacgacccgaacggcgacgtgctcgtgatcgactccgtcacgcccgtggacgcggaggtc
ggcgcggtcgacatcgtggacgagggccagggcctgcagctcgcgctcgccgcgggcgcg
accggcacggtgaggttctcctacgtcgtgagcgacgggcgcggcggcaccgccacggcg
gacgtgcgcgtcgcggtgcgctcggccggggagaacgggccgcccgtgcaggcgcggccc
gcgaccggcaccgtcgcggagggcgaccggctgcggaccgacgtgctgggcggctggtac
gaccccgacggggatcccgtgtacctcacgcgcgcgagcgtccccgcgcccgacgccgtc
agctggaagcccgaggggcgcgtcgtctacacggacgccggggccggcggggacacgcgc
acggtcgcgctgcaggtgtccgacgggcgcgaggagggatcgggcgagctggtggtcacg
gtgcgccgcgcgggggacgtgccgctcgtggccgaggggttcgtcgtgcaggcgtcgctc
gggcgcgagatcaccgtcgagccgctcacgcacgcgcgcggcgggagcggcgcgatccgg
ctggcggccgtgtctgcgcgggccggcctgcagatcacgccggacctcgaggcgggcacc
ttccgcctcgagggcgggcaggcgggcacgcatctcgtcgagtacacggtgaccgacggg
cggaccaccgccacgggcgtggtgcgcgtcgaggtgcgcggcgcccccgccgccgacggc
cgacccgtgaccgtgccgcacaccgtgttcgtgcgcgccctccaggcccaggacgtggac
gtgctccaggccgacttcgacccggccggcggcgtgctcgtgatcaccgacgccgtctcg
cccgacgaggcggtgggcgtgcacgccgaggtggtggggcagaggctcgtgcggatcagc
ctgacgcggccgctcgacgggcccgtcgacgtcgcgtaccgcgtgagcaacggcgtggcg
gaggcgaccggcgtgatcaccgtgatcgaggtgcccgagcccgccgtgcgccagccgccc
gtcgcgaccgacgaccgcgtggccgtgcgcgtgggcgacgccgtcgacatccccgtgctc
gccaacgacgagcagcccgacggcgaccggctgcgcctcgaccccgtgctcgtggacccg
ctgcccgatggcgcgggcctcctcttcgcgagcgaggaccgcctccgctacctcgcgccc
gaccgcacgggcgactacaccgccgtctaccgcgcggtcgcgcccgacggccagtgggcg
accgcgaccctcaccgtctccgtgcgcgaggccgacgtggcgaccaacgccgcgcccgtg
ccgcgccctctgacggcgcgcgtgctcgcgggggagaccgtgcggatccccgtgccgctc
accggcatcgaccccgacggcgactcggtgcggctcctcgggcaggacaccggacccgag
aagggccaggtcgtcgaggtcgggccggactggatcgactaccaggcgggcgactactcc
accggcaccgacgcgttcgcgtacgccgtggtcgacgggctgggcgcgcgggcgaccggc
acgatccgcgtgggcatcagcacgcgcgtcgagggcgccaggaacccggtcgccaccgca
gacaccgtgaccgtgcggcccggccgcgtgctccgcgtgcaggtgctcgcgaacgacacg
gatcccgacggcggcgccctctcgctcgtgtccgtgcagccgcaggccgagggcctcgtc
gcggggctcgacggcgacaccgtgcgcgtcgtcgcgcccgagcaggccggccgctacggc
ttcgtctacggcgtgcgcaacgcgcgcggcggcagcgacgaggcgttcctcacggtgatc
gtggatcccgccgccccgcccacgcgcccggtcgcgcgcgacacggtgctccagctctcc
gacgtgctcgaccggtcgagcgtcgacgtggacgtgatgcgcaacgtcttctccgcggag
ggcgacgcgtcgtcgctcgtgctcggcgtcggcgcgggctacgaggacgtggcgcgcgtg
acgcccgacggccgcatccgcgtcgaggtgggcgacgagcgccgcatcgtcccgttcacg
gtggcgcagccagacgacccgtcgatctccgcgacggccttcgtctgggtgcccggcttc
gcggacacgctgccgcagctgcgcgcgggccagccgcggccgaccgtggcgagcggcgag
cggctcgtggtcgagctcgacgagcaggtggtggccgcgggcgggcgcgcggtgcggatc
gccgacccgaacgcgctctccgcgacgcacgccgacggccccgtggagctcgtggacgag
gacaccatcgcgtaccgcagcgagccggggtacttcgggccggcggcgatctccttcacg
gtgaccgacggatccggcgacggcgggcgcaccgccgcgctcgtgctcccgatcacggtc
acgcccaccgagaaccagccgcccgtcttcacgggcgccgtcatcgacctcgagcccggg
cagtccaaggacgtcgacctcgggcgcctcaccacctacccgtaccaggacgaccgcggg
cagctcgcgttcgcgctggagggggccgtcgcggccggcttccgcgcgtccgtcgacggc
ggcacgctgcgcatctccgcggacgagggcgtcgcgacgggccaggccgcgtcgttcccc
gtgagcgtccgcgacgcgacgcagaccggccgcgcgggccgcgtcgacctccgcgtcgtg
ccgtccacgcgcccgctcgcgcagcccgcgaccgacgagggcaccgtgacgcgcggatcc
gccacctccgtcgacgtgctcgccaacgaccaggcgggcaaccccttcccgggcacgccg
ctgacggtcacctccatccgcggcgccgacggcgcgagcctccccgcgggcgtcaccgtc
acgccatcggccgaccgcgccacgctcgccgtgagcgccgccgccgacgccgcgcccggc
gacgtgcgcgtgcagtacgaggtgcgcgacgccacgggcgacgcgggccgggccgcgttc
ggcaccgtcgtgatccacgtgcaggaccgcccgggacccgtcaccgccctccgcgcctcc
ggcttcgccgaccggtccgtcacggtggcgttcgagccgggcgtctttaacgggtccgcg
atcacgggataccaggtgcgcgtgctccgcggcggcacggcgaccgcgaccgtcacctgc
ccgtcgacgacctgcaccgtgccgacgcccggcaacggacccgggagctccgtggaggtg
gaggtctccgccgtgaacggcgtgggcgtgtcggatcccgtgtcgatctcgggcctctgg
tcggacgtgctcccggccgcccccgcgggcctcgccgtcgagccgctcgtcgacgggctg
cgcctctcgtggcagccgtccgtcgtgccgtcgtcgtcgagccccgtcacgcagtacgtc
gtgggcgtgggcggcatcacgcggcaggtcgcggccgacgccacgagcctggaggtgcgg
gatccgtcgctcgtcgccgaggtgcccgtcgccgtgtcggtggccgcgcgcaacagcgcg
caggtgcaggacgcgtccgcgtggctcgccgccaccgcgatcggcacgccccgcggcgcg
ccgaccgcgaccggcgcgcccaccgcggtggccgacccggccgacgagacgcgcgtcacc
gtgtcgtggccggcgttccagggccagggcgtcgacgggatccgctacctcgtcgccgcg
tacgccccgggttccgcgcccagctgctccgtgcccaccgagggcgtcgcgccgtggtcc
gcgcagcacggccccgcggtcgacgtgggcagcgcgaccagccacgtgttcacgggcctc
gccacggaccagcccgtcgcgttcgcggtgctcgccgccaacagtcagggctgcacggtc
gtcgaggccggccagctcacgccgcgcacggcgccgtcgacgcccgtcgtcacggtcgac
ctgccgcgcgcggaccgggggagcgacggcgtgttccgcgcggtcctcgcgggcgcccgc
taccggccgggcagcgcgtccgcctccgcccagctgctgtaccgcgtcgacgggcagggc
gacggcgtgcccgtgggcgtcggccaggcgctcaccctgccgcgcacgggcgtcggcgcg
acgatccaggtgcgcgtcgtcgaggactccggcgacgggcgcccgcgctcgagcggctgg
tcggatcccgtctccgccggcaccgcggtcgacgcgcgcgccggcgacgtgcgggcggcg
accgacgaagcgggcgccacgaccttctcctggacctcgatgccgccggcggtggccggc
ttcgggcgcatcggcgacggcggcggctacgcgcgcagcgagcggcgctgcggcggccag
ggcgcgtggaccgacgcgtcctcgggcgcggccggatcctgcacggtcccggcgggcggc
gagcggatcctcgaggtgcgcgtcaccgcgaactcgggcaccctgtacacgtacgcccac
cgcggatga
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