Clavibacter nebraskensis: CMN_02205
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Entry
CMN_02205 CDS
T02530
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CMN_02205 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmc03400
]
CMN_02205 (xseB)
Enzymes [BR:
cmc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CMN_02205 (xseB)
DNA repair and recombination proteins [BR:
cmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CMN_02205 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Spectrin_SYNE1
TraB_PrgY_gumN
PASTA
PMBR
Motif
Other DBs
NCBI-ProteinID:
CCE76143
UniProt:
A0AAI8ZJM2
LinkDB
All DBs
Position
2331904..2332149
Genome browser
AA seq
81 aa
AA seq
DB search
MPTSPADTGARLPDVSELSYEEARDALVRVVNDLEQGASTLEESIALWERGEALAARCEE
WLLGAKARLDAARTTAASDAG
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccagccccgccgacaccggcgcacgcctgcccgacgtctccgagctcagctac
gaggaggcgcgcgacgccctggtgcgcgtcgtcaacgacctcgagcagggcgcgtccacg
ctcgaggagtcgatcgccctgtgggagcgcggcgaggccctcgcggcccgctgcgaggag
tggctgctcggcgccaaggcgcggctcgacgccgcccgcacgaccgccgcatccgacgcc
ggctga
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