Clavibacter nebraskensis: CMN_02507
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Entry
CMN_02507 CDS
T02530
Symbol
uvrD4
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc03420
Nucleotide excision repair
cmc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMN_02507 (uvrD4)
03430 Mismatch repair
CMN_02507 (uvrD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmc03400
]
CMN_02507 (uvrD4)
Enzymes [BR:
cmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMN_02507 (uvrD4)
DNA repair and recombination proteins [BR:
cmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMN_02507 (uvrD4)
MMR (mismatch excision repair)
Other MMR factors
CMN_02507 (uvrD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCE76441
UniProt:
A0AAI8ZK27
LinkDB
All DBs
Position
complement(2657663..2660113)
Genome browser
AA seq
816 aa
AA seq
DB search
MSADPAALRPSSTPIILDGRSGADGGPGAPEDPLLEGLNPEQREAVVYRGPALLIVAGAG
SGKTRVLTHRIASLIESREAWPSQILAITFTNKAAAEMRERVESLLGQASEGMWISTFHS
ACVRILRREAEAFGFTQNFTIYDSADSRVLIKRIIKQLDADTLGFTVSSVSGRISKLKNE
LSDADTFARTANFNDPVEAMFVEIFRQYTRSLASANAFDFDDLIGQTVYLFRAFPKVAAL
YQRRFRHVLVDEYQDTNHAQYSLIRELTRAVAPEDVPVDTRMSTNGMGGIDGASLTVVGD
SDQSIYAFRGADIRNITEFERDFPQSKVVLLEQNYRSTQNILTAANAVISNNFDRKDKKL
WTSIGDGDKIIGFTGYSGHDEAQFVADEIQKLHDEGTAYSEIAVFYRTNAQTRALEEILI
RSAVPYRIMGGTKFYERAEIKDAMAYLVAVANPADVLALRRILNTPKRGIGPATETALAN
FAESHGVTFREAMRRASELGLGPKVTQAILTLSRMLDEVALLLDPDRPEGRTSVGDLVTT
LLEKSGLVQALRASKDAQDEARAENVEELVAVTKEFSRNNPEGQLVDFLTEVSLVAAADE
LDDSSGTVSLMTLHTAKGLEYDSVFLTGVEEDLLPHRMSANEPGGPAEERRLFYVGITRA
RRRLFISLAMTRAQFGEVNVAMPSRYLQEIPAELIDWKQSPGMATSRGGTQPRALNARRE
GGGYGGRSRSSSGFEDPALPPPPRPKTQWANTVTGQVRDNGDLELAFGDRIRHTDFGEGR
VTGITGEGRKRIAEVQFDGPAGRKRLLIKIAPIEKL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaccccgccgcccttcgcccctccagcacgccgatcatcctcgacggccgg
tcgggcgccgacggcgggccgggagccccggaggatccgctgctcgagggtctcaacccg
gagcagcgcgaggccgtcgtgtaccggggtcccgccctgctcatcgtcgcgggcgccgga
tccggtaagacgcgcgtgctgacgcaccgcatcgcgagcctcatcgagtcccgggaggcg
tggccgagccagatcctcgccatcaccttcacgaacaaggccgccgccgagatgcgcgag
cgcgtcgagtcgctgctcgggcaggcatccgagggtatgtggatctcgacgttccactcc
gcgtgcgtgcgcatcctccgacgcgaggcggaggcgttcggcttcacgcagaacttcacc
atctacgactccgcggacagccgcgtgctcatcaagcggatcatcaagcagctcgacgcg
gacacgctcggcttcaccgtctcctcggtgtccggtcgcatctcgaagctcaagaacgaa
ctgtcggatgcggacacgttcgcgcgtacggccaacttcaacgacccggtcgaggccatg
ttcgtggagatcttccggcagtacacgcgctcgctcgcctccgccaacgcgttcgacttc
gacgacctcatcgggcagaccgtctacctcttccgcgcgttccccaaggtcgcggcgctc
taccagcggcgcttccggcacgtgctggtggacgagtaccaggacacgaaccacgcccag
tactcgctcatccgggagctgacgcgcgcggtcgccccggaggacgtgcccgtcgacacg
cgcatgtccacgaacggcatgggcgggatcgacggggcgtcgctcaccgtggtgggcgac
agcgaccagtccatctacgcgttccgcggcgctgacatccgcaacatcaccgagttcgag
cgcgacttcccgcagtcgaaggtcgtgctcctcgagcagaactaccggtcgacccagaac
atcctcaccgccgccaacgccgtcatctcgaacaacttcgaccgcaaggacaagaagctg
tggacgtccatcggcgacggcgacaagatcatcggcttcaccgggtactcgggccacgac
gaggcgcagttcgtcgccgacgagatccagaagctccacgatgagggcaccgcctactcc
gagatcgccgtcttctaccgcaccaacgcgcagacgcgcgcgctcgaggagatcctcatc
cgctcggccgttccctaccggatcatgggcgggacgaagttctacgagcgggccgagatc
aaggacgccatggcgtacctcgtcgccgtggcgaaccccgcggacgtgctggccctgcgc
cgcatcctcaacaccccgaagcggggcatcggccccgccacggagacggctctggccaac
ttcgcggagtcgcacggcgtgaccttccgcgaggccatgcgccgcgcgtccgagctgggg
ctcgggcccaaggtgacgcaggcgatcctcacgctctcgcgcatgctcgacgaggtggcg
ttgctgctggaccccgaccgcccggaggggcggacctccgtgggcgacctggtgaccacg
ctgctcgagaagagcggcctggtgcaggcgctgcgggcgagcaaggacgcgcaggacgaa
gcacgcgccgagaacgtcgaggagctcgtcgccgtcacgaaggagttctcgcgcaacaac
cccgagggccagctggtcgacttcctcacggaggtgtcgctcgtcgccgcggcggacgag
ctcgacgactcgagcggcaccgtgtccctcatgaccctccacaccgcgaaggggctcgag
tacgactcggtcttcctcaccggcgtggaggaggacctgctgccccaccgcatgtcggcg
aacgagcccggcggcccggcggaggagcgccgcctgttctacgtcggcatcacgcgcgcc
cgccggcgcctgttcatctccctggcgatgacccgggcccagttcggcgaggtgaacgtc
gcgatgcccagccggtacctgcaggagatcccggccgagctcatcgactggaagcagtcg
cccggcatggccacgtcgcgcggaggcactcaaccgcgcgctctcaacgcccgacgcgag
ggaggggggtacggcggtcgctcccggtcctcgagcgggttcgaggatccggccctgccg
ccgcctccgcgccccaagacccagtgggccaacacggtcaccggccaggtgcgcgacaac
ggcgacctcgagctcgcgttcggcgaccgcatccgccacaccgacttcggcgagggccgc
gtcacgggcatcacgggcgaggggcgcaagcgcatcgccgaggtgcagttcgacggaccg
gcgggccgcaagcgcctgctcatcaagatcgcgcccatcgagaagctctag
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