KEGG   Clavibacter nebraskensis: CMN_02654
Entry
CMN_02654         CDS       T02530                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
cmc  Clavibacter nebraskensis
Pathway
cmc00040  Pentose and glucuronate interconversions
cmc01100  Metabolic pathways
cmc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:cmc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    CMN_02654
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMN_02654
Enzymes [BR:cmc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     CMN_02654
SSDB
Motif
Pfam: Beta_helix Glyco_hydro_28 Pectate_lyase_4
Other DBs
NCBI-ProteinID: CCE76586
UniProt: A0AAI8ZK73
LinkDB
Position
2799803..2800885
AA seq 360 aa
MRIRLLPAALAGALLLVALTGTGPTAPASAATASGTSATASASADSGSGSAATGAGPTAR
VASVAALRDAIAQHVHHIVITTSLYGGTSPVYVDVLDSASSGTVIEGATPTVELVNIQLR
IFDLTYAGAIHDVTVRDLTMHGRIQDLVALTGAATKPYGVGVNYEAISVRGAAHVTIDHI
VAYDTTDDLMSVTRGADDVTISNSTFSYSRAYADIDPSITWDWGFGLQPLASERLGILVG
ANAKDSYAVTGHLHVNLVDDHIGPLVRGRPLLRGDVDVKGVTFDNTQAGSEQYAAIEVGS
GGRVVVEGCEFDHSNNPIAIHLDSPSDTYALFEGGNTFIATTGTIAKGQPLPPRAGAARS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcgcatccgcctcctccccgccgcgctcgccggcgcgctcctgctcgtcgcgctgacg
ggcaccggcccgaccgctcccgccagcgccgcgaccgcgagcggcacctccgccaccgcg
agcgcgtccgccgactccggctccggctccgcggccacgggcgccggccccaccgcccgc
gtcgccagcgtcgccgccctgcgcgacgccatcgcgcagcacgtgcaccacatcgtcatc
accacctcgctctacggcggcacctcgcccgtctacgtcgacgtgctcgactcggcatcg
agcggcaccgtcatcgagggcgccaccccgacggtggaactcgtgaacatccagctgcgg
atcttcgacctcacctacgcgggcgccatccacgacgtgacggtgcgcgacctcaccatg
cacggccgcatccaggacctcgtcgcgctcacgggagcggcgacgaagccctacggcgtc
ggcgtcaactacgaggccatcagcgtgcgcggggccgcgcacgtgacgatcgaccacatc
gtcgcctacgacaccaccgacgaccttatgtcggtgacgcgcggggccgacgacgtcacc
atctccaacagcacgttctcgtactcgcgcgcgtacgcggacatcgacccgagcatcacg
tgggactggggcttcggcctgcagccgctcgcgtccgagcgcctcgggatcctcgtgggc
gccaacgcgaaggacagctacgccgtcaccggccacctccacgtgaacctcgtcgacgac
cacatcggcccgctcgtccggggacggccgctgctgcgcggcgacgtggacgtgaagggc
gtgacgttcgacaacacgcaggcaggatccgagcagtacgcggccatcgaggtcggcagc
ggcggccgggtcgtcgtcgagggctgcgagttcgaccactcgaacaaccccatcgcgatc
cacctcgactcaccctcggacacctacgcgctgttcgagggcggcaacaccttcatcgcg
acgacgggcaccatcgccaagggccagccgctcccgccacgggcaggggccgcgcggagc
tga

DBGET integrated database retrieval system