Clavibacter nebraskensis: CMN_02854
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Entry
CMN_02854 CDS
T02530
Symbol
crtE
Name
(GenBank) Cmm ortholog CMM_2888; Cms ortholog CMS_2608
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00900
Terpenoid backbone biosynthesis
cmc01100
Metabolic pathways
cmc01110
Biosynthesis of secondary metabolites
Module
cmc_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CMN_02854 (crtE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cmc01006
]
CMN_02854 (crtE)
Enzymes [BR:
cmc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CMN_02854 (crtE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CMN_02854 (crtE)
2.5.1.29 geranylgeranyl diphosphate synthase
CMN_02854 (crtE)
Prenyltransferases [BR:
cmc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CMN_02854 (crtE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Tnp_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
CCE76780
UniProt:
A0AAI8ZKT2
LinkDB
All DBs
Position
complement(2979394..2980416)
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AA seq
340 aa
AA seq
DB search
MNGVLDAFFARSLVRAEVMGSEYVKLWRTLESNTAGGKRFRPRMVMAAYDGLGGQDVQAA
AHVGAAFEMLHTALIVHDDVIDRDFTRRGGPNVSGAYRDIATTQGLPQPLAEHRGMSAAV
IAGDLALVNAYRLIDASGVRDLTRSHLLEILDDAVFASAAGELIDVEFSLTADVPSVEEI
LRMERLKTAVYSFEAPLQAGAVLAGARPEVVAALGDFGRDIGIAYQVVDDVLGVFGDEQE
TGKTNLGDLREGKRTVLIAHAVRSSEWGEISALVGKDDLSRGEAALVRSVLESSGARAYA
EGVARDLAVAAVARLDDPVVPEALRRELAPVAESVLGRIR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcgtgctggacgcgttcttcgcgcggtcgctcgtgcgggccgaggtcatgggt
tccgagtacgtgaagctgtggcgcacgctcgagtcgaacaccgccggcggcaagcgcttc
cggccccgcatggtcatggccgcgtacgacggcctcggcggccaggacgtgcaggccgcg
gcccacgtcggcgccgcgttcgagatgctccacaccgcgctcatcgtccacgacgacgtc
atcgaccgcgacttcacccggcgcggcggccccaacgtctccggcgcctaccgcgacatc
gccaccacgcagggtctgccgcagccgctcgccgagcatcgcggcatgtcggccgccgtc
atcgcgggtgatctcgcgctcgtgaacgcgtaccgcctcatcgacgcgagcggcgtgcgc
gacctcacccggtcgcacctcctggagatcctcgacgacgccgtgttcgcgtcggccgcg
ggcgagctcatcgacgtcgagttctcgctcaccgccgacgtgccgagcgtggaagagatc
ctccgcatggagcggctcaagaccgccgtgtactcgttcgaggcgccgctgcaggcgggc
gccgtgctcgcgggcgcgcgacccgaggtggtcgcggcgctcggcgacttcggccgcgac
atcggcatcgcctaccaggtggtcgacgacgtgctcggcgtcttcggcgacgagcaggag
accggcaagaccaacctcggcgacctgcgcgaggggaagcgcaccgtgctcatcgcgcac
gccgtccgctcgtcggagtggggcgagatcagcgcgctcgtcggcaaggacgacctctcc
cgcggcgaggcggcgctcgtccgctcggtgctggagagctcgggcgcccgggcctacgcc
gagggcgtcgcgcgggatctcgcggtcgccgccgtcgcgcgcctcgacgacccggtcgtg
ccggaggcgctccgccgggagctcgcgcccgtcgcggagtccgtgctcgggcgcatccga
tga
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