Clavibacter nebraskensis: CMN_02905
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Entry
CMN_02905 CDS
T02530
Symbol
hupB
Name
(GenBank) DNA-binding protein Hu
KO
K03530
DNA-binding protein HU-beta
Organism
cmc
Clavibacter nebraskensis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmc03032
]
CMN_02905 (hupB)
03036 Chromosome and associated proteins [BR:
cmc03036
]
CMN_02905 (hupB)
03400 DNA repair and recombination proteins [BR:
cmc03400
]
CMN_02905 (hupB)
DNA replication proteins [BR:
cmc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CMN_02905 (hupB)
Chromosome and associated proteins [BR:
cmc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CMN_02905 (hupB)
DNA repair and recombination proteins [BR:
cmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CMN_02905 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
CCE76829
UniProt:
A0AAI8ZK29
LinkDB
All DBs
Position
complement(3023138..3023425)
Genome browser
AA seq
95 aa
AA seq
DB search
MADKSLNRTELVAAVAAESGQSQAAVNGVLDALFSTVATNVADGVKVTIPGWVAFEQTAR
AARTGRNPQTGEPLEIKASKGVKVSAGSKLKAAVK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagtcactcaaccgcaccgagctcgttgccgccgtcgccgcggagtcgggt
cagagccaggccgccgtcaacggcgtcctggacgcgctcttctccaccgtcgcgaccaac
gtcgccgacggcgtgaaggtcacgatcccgggctgggtcgcgttcgagcagacggctcgc
gccgcgcgcacgggccgcaacccgcagacgggcgagcccctcgagatcaaggcgtccaag
ggcgtcaaggtctccgccggcagcaagctcaaggccgccgtcaagtag
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