KEGG   Corynebacterium maris: B841_02385
Entry
B841_02385        CDS       T02784                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cmd  Corynebacterium maris
Pathway
cmd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cmd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B841_02385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmd03021]
    B841_02385
   03400 DNA repair and recombination proteins [BR:cmd03400]
    B841_02385
Enzymes [BR:cmd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B841_02385
Transcription machinery [BR:cmd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B841_02385
DNA repair and recombination proteins [BR:cmd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B841_02385
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AGS33960
UniProt: S5T0A3
LinkDB
Position
511051..515058
AA seq 1335 aa
MFDVNLFDELRIGLASAEDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHNDLSTLEAEMLLEKKEVEQDVESEIAERAGKLEED
LAELEEAGAKADARRKVQNAADKEMQHIRERGEREVERLEEIWQTFVKLAPKQMIIDELI
YEELLDRYEDYFTGGMGAEAIQTLIQNYDIDAEAEELNHIIAEGKGQKKMRALKRLKVVA
AFQRSKNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVEHDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMDKNEDEIGGE
GAYRPADDNGPARGVYSSPAEAIMARDRGVLGLQAPIRVRIDHLRPPAEVEAELYPEGWE
QGDVWTTDTTLGRIMFNELLPWNYPYLEGVMARKGTGKVTILLGDVISDLVDKYPMITVA
QTLDKLGDAGFYWATRSGVTISMSDVLVLPNKTEILESYEKEAEVIERKYWQQGKLTERE
RYERLVELWQDATNTVGQAVEAMYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRES
DCGSRQGVRVPVAEQLLDAEGNASYVRDALVETSLSGRVLSGDLKDAEGNLIYEAGTDLT
EQIIDDIVAHGIDKVKVRSVLTCQTPSGVCAKCYGKSMATGQLVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTISLEDEGNFWTLR
ITPDDGGDDVIYEKLSKRQGLAQVSRPMDSNPQAMIERSLQEGDRVEVGDRLLRGAADPH
DVLEILGRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVIEAGTTTLLPGT
LVDLSEAKQVNSTALAESGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDQLLGLKENVIIGKLIPAGTGISRYRNITVNPTEAARNAAYSIPTYGESIYGDEGYG
EFTGASVPLDEAFDL
NT seq 4008 nt   +upstreamnt  +downstreamnt
gtgttcgacgtaaacctcttcgacgagctccgcatcggcctggccagcgccgaggatatc
cgccgttggtccaagggcgaggtcaagaagccggaaaccatcaactaccgcaccctcaag
ccggagaaggacggtctcttctgcgagcgcatcttcggcccgacccgggactgggagtgc
gcctgcggcaagtacaagcgcgtccgctacaagggcatcatctgtgaacgctgcggcgtc
gaggtgaccaagtccaaggtgcgtcgcgagcgcatgggccacatcgagctggccgcgccc
gtcacccacatctggtacttcaagggcgtgccgtcccggctgggctacctgctggacctc
gctccgaaggacctggagcgcatcatctacttcgcggcgaacatcatcacgtccgtcgac
gatgaggcccgccacaacgacctgtcgaccctcgaggcagagatgctgctcgagaagaag
gaagtcgagcaggacgtcgagtccgagatcgccgagcgcgccggcaagctggaagaagac
ctcgccgagctcgaggaagccggcgccaaggccgacgcccgccgcaaggtgcagaacgcg
gccgacaaggagatgcagcacatccgcgagcgcggcgagcgcgaggtcgagcgtctcgag
gagatctggcagaccttcgtcaagctggctccgaagcagatgatcatcgacgagctcatc
tacgaggagctcctcgaccgctacgaggactacttcaccggcggcatgggcgccgaggcc
atccagacgttgattcagaactacgacatcgacgccgaggccgaggaactcaaccacatc
atcgccgagggcaagggccagaagaagatgcgcgccctcaagcgcctcaaggtcgtcgcc
gctttccagcggtccaagaacgacccggccggcatggtcctggacgcgatcccggtgatc
ccgccggagctgcgcccgatggttcagctcgacggcggccgtttcgccacctccgacctg
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtggacgcc
ctgttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgtccgctgaag
tcgctgtccgacctgctcaagggcaagcagggccgcttccgtcagaacctgctgggcaag
cgcgtcgactactccggccgttccgtgatcatcgtcggcccgcagctcaagctccacgag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgagcacgactacgcgcaaaacatcaagtccgccaagcgcatggtcgagcgtcagcgc
cccgaggtgtgggacgtgctcgaggaagccatttccgagcacccggtgctgctcaaccgt
gcaccgacgctgcaccgcctgggcatccaggccttcgagccgaagctcgtcgagggcaag
gccatccagctgcacccgctggcctgtgaagccttcaacgccgacttcgacggcgaccag
atggcggtccacctgccgctgtccgccgaggcgcaggcagaggcacgcgtgctgatgctg
tcctcgaacaacatcctgtccccggcgtccggcaagccgctggccatgccgcgcctggac
atggtcacgggcctgtacttcctgaccatggacaagaacgaggacgagatcggcggcgag
ggcgcctaccgcccggccgacgacaacggcccggcccgcggcgtgtactcctccccggcg
gaggccatcatggcccgcgaccgcggagtcctcggcctgcaggccccgatccgggtccgc
atcgaccacctccgcccgccggcggaggtcgaggcggagctctaccccgagggctgggag
cagggcgacgtctggacgaccgacaccacgctcggccgcatcatgttcaacgagctgctg
ccgtggaactacccgtacctcgagggcgtcatggcccgtaagggcacgggcaaggtcacg
atcctgctcggcgacgtgatttccgacctggtggacaagtacccgatgatcaccgtggcg
cagaccctggacaagctcggcgacgccggcttctactgggcgacccgctccggcgtgacc
atctccatgtccgacgtgctggtgctgccgaacaagaccgagatcctcgagtcctacgag
aaggaagccgaggtcatcgagcgcaagtactggcagcagggcaagctgaccgagcgcgag
cgctacgagcgtctggtcgagctgtggcaggacgccaccaacacggtgggtcaggccgtc
gaggcgatgtatccggacgacaacccgattccgatgatcgtgaagtcgggcgccgccggc
aacatgcgccagatctggaccctggcgggcatgaagggcatggtcgtgaactcgcgcggc
gagtacatcacccgcccgatcaagacctccttccgtgagggcctgtcggtgctggagtac
ttcaacaactcccacggttcccgtaagggcctggccgacaccgctctgcgcaccgccgac
tcgggctacctcacccgtcgtctggtcgacgtggcgcaggacgtcatcgtccgcgaatcg
gactgcggttcccgtcagggcgtgcgtgtcccggtcgccgagcagctgctcgacgccgag
ggcaacgcctcctacgtccgcgacgcgctcgtggagacctccctgtcgggccgcgtgctc
tccggcgacctcaaggacgccgagggcaacctgatctacgaggcgggcaccgacctgacc
gagcagatcatcgacgacatcgtcgcccacggcatcgacaaggtgaaggtccgctccgtt
ctgacctgccagaccccgtcgggcgtctgcgccaagtgctacggcaagtccatggccacc
ggccagctggtcgacatcggcgaggccgtcggcatcgtcgcagcccagtcgatcggtgag
ccgggcacccagctgacgatgcgtaccttccaccagggtggcgtcggcggcgacatcacc
ggcggtctgccgcgtgtgcaggagctgttcgaggcccgcgttccgaagaaccgcgccccg
atcgcctccgtcgccggcacgatctcgctggaggacgagggcaacttctggaccctgcgc
atcaccccggacgacggcggcgacgacgtcatctacgagaagctgtccaagcgtcagggc
ctggcgcaggtctcccgcccgatggactccaacccgcaggccatgatcgagcgttcgctg
caggaaggcgaccgcgtcgaggtgggcgaccgcctgctgcgcggcgccgccgacccgcac
gacgtgctggagatcctcggccgccgtggcgtggagaagcacctgatcgacgaagtgcag
gccgtgtaccgcacccagggtgtggccatccacgacaagcacatcgagatcatcatccgg
cagatgctgcggcgcggcaccgtcatcgaggccggcacgaccacgctgctcccgggcacc
ctggtcgacctgtccgaggcgaagcaggtcaactccaccgctctggccgagtccggccag
ccggcggagctgcgctccgagatcatgggcatcaccaaggcctccctggccaccgagtcc
tggctgtcggccgcctccttccaggagacgacccgcgtcctgaccgacgcggcgatcaac
aagcgctccgaccagctgctcggcctcaaggagaacgtgatcatcggtaagctgatcccg
gccggaaccggcatctcgcgctaccgcaacatcacggtcaacccgactgaggcagcccgc
aacgccgcctactcgatcccgacgtacggggaatcgatctacggcgacgaaggctacggc
gaattcaccggcgcttccgtgccgctggacgaggccttcgacctctaa

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