KEGG   Corynebacterium maris: B841_03940
Entry
B841_03940        CDS       T02784                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cmd  Corynebacterium maris
Brite
KEGG Orthology (KO) [BR:cmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmd03400]
    B841_03940
Enzymes [BR:cmd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B841_03940
    5.6.2.6  RNA 3'-5' helicase
     B841_03940
DNA repair and recombination proteins [BR:cmd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    B841_03940
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr WH2_Lhr Helicase_C ResIII DUF6406 PhoH AAA_25
Other DBs
NCBI-ProteinID: AGS34271
UniProt: S5TH58
LinkDB
Position
839787..844391
AA seq 1534 aa
MADNTLDRFRPQVATWFTEVFAAPTQVQEQAWEAIADGENALVVAPTGSGKTLAAFLWAL
NSLVERDEREEGVRILYVSPLKALGVDVENNLRAPLTGIARVAQRLGLPLPDVTVGVRSG
DTPQAERNRQVRNPPDILITTPESLYLMLTSKAAAVLGTVETVIIDEIHALAGSKRGVHL
ALSLERLTGDPQRIGLSATVRPLETVAKFLGGARPVQIIAPPGEKKWELDVHVPVEDMSD
LPVPEQGSTIGDAVIDDPLGLTGPAPTPTSIWPFVEQALYDEVMAHRSTLIFVNSRRTAE
RLTSRLNEIWAAEHAPESLSPPLRRDPAQLMKPTDLAGTAPPVIARAHHGSVSKDERAAT
ETMLKEGTLKAVVSTSSLELGIDMGAIDLVVQVESPPSVASGLQRVGRAGHSVGAVSEGS
FYPKHRADLVQSAATVERMRAGLIEELTVPANPLDVLLQQTVAAVAAGDVLADDWFATVR
RSHPYRDLDRDVFDSVIDLAAGSYPSTDFAELKPRIVYDRISGMLSARPGAQRVAVTNAG
TIPDRGMFGVFLLGGEGAPRRVGELDEEMVYESRVGDVFTLGASSWRVEDITRDQVLVTP
APGHTGRLPFWSGDAQGRPYELGKALGAFRREALADPDRLDGLGLDDNARSNLVAYLAEQ
REATGVVPDEKTLVVERFRDEVGDWRVVLHTPFGKGVNQAWALAVGAQIAEATGMDAQAV
AGDDGIVLRLPEGEQEPDAELFTLDPDDVADVVTEQVGGSALFASRFRECAARALLLPRR
NPGKRAPLWQQRQRAEQLLDVARKYPSFPIILETVREVLQDVYDLPALTEVLRDLKARRL
RIAEVTVDQPSPFASSLLFNYTGAFMYEGDSPLAEKRAAALALDPSLLAKLLGTVELRDL
LDAEIIAQVHAQLQRTGDRAARTGEELADVLRVLGPIPVDELARHTTFEDPLTVARQQLA
GRVMEVRIGSRTHLAQVQDAPLLRDGLGVPVPPGVPAQVETITDALDQLVGRWTRTRGPF
VPEDVAEAFGLAPGAAFSALRPLIESGKVVEGRYRQGVDEAEYVAAEVLKIIRSRSLAAA
RAQTQAVSQSAFGRFLPDWQHVAPIGSTPALRGADGVFAVLEQLAGVRLSASAWESMVLP
SRVGDYNPVHLDELTSSGEVLVVGSGKNVMLLPADYAPQLVDEPVDVGLTEVQESLLEIL
RRGGGFLFTDLDVPGTTEERREALWGLVEAGLVSPDGFQPIRARLAGGATAHKTKRRPTR
SRLRMGRAGIARQTVPPDMVGRWSLTVAPDTDATTRSLVRGETWLERYGVLTRGSVVAED
VVGGFALAYRVLSGFEESGKAMRGYVVEALGASQFSTPAVIDRLRGHADSPDVQGWPSGA
AEPAVHVLAAADPANPYGAALPWPAQGPSRAAGALVVLVDGLLLAHITRGGRVLTTFFDS
LPAGLEVGEEGLTAMVVGALAEVVASGRMTPLTVEKLNGASVFDSGAVPVLRSAGAALTP
KGVRIGGRSAPPRMPRRGRTVTEALGELSFDDPK
NT seq 4605 nt   +upstreamnt  +downstreamnt
atggccgataacaccctggatcgtttccgcccacaggtggctacctggtttacagaggtc
ttcgccgcccccacccaggtgcaggagcaggcgtgggaggcgatcgcggacggagaaaac
gccctggtggtggcgccgaccggttcgggcaagaccctggccgcgtttctatgggcgctc
aattccctcgtggaacgcgacgagcgggaggaaggcgtgcggatcctctacgtgtctccg
ctcaaggccttgggcgtggacgtggagaacaacctgcgcgcgcccctgacaggcatcgcg
cgcgtcgcgcagcgcctgggccttcccctcccggacgtcacggtgggcgtgcgttccggc
gacaccccgcaggcggaacgcaaccggcaggtgcgtaacccgccggacatcctgatcacg
acgccggagtcgctgtacctcatgctcactagcaaggccgcggccgtattgggcaccgtc
gagaccgtcatcatcgacgagatccacgccctggccggttccaaacgcggcgtgcacctg
gcgctgagcctggagcggctcaccggcgacccgcagcgcatcgggctgtcggcgacggtg
cggccgctggagacggtggcgaagttcctcggcggcgcccggccggtgcagatcatcgcc
ccgccgggggaaaagaagtgggagctcgacgtgcacgtccccgtcgaggacatgagcgat
ctgccggtgccggaacagggctcgacgatcggggacgccgtgatcgacgacccgttgggg
ctcaccgggccagctcctacccccacctcgatctggccgtttgtggagcaagccctctac
gacgaggtcatggcgcaccgctccacgctgatcttcgtcaactcgcgccgcaccgcggaa
cggttgaccagccggctcaacgagatctgggccgccgagcacgcccccgaatcgctcagc
ccgccgttgcgccgcgacccggcgcagctgatgaagcccactgacctggcgggcacggcc
ccgcccgtcatcgcacgcgcccaccacgggtcggtgtccaaggacgaacgcgcggccacg
gaaacgatgctcaaggagggcacgctcaaggcggtggtgtccaccagttccctggagctg
ggcatcgacatgggcgccatcgacctggtcgtgcaggtggagtcgccgccgtcggtggcc
tccggcctgcagcgcgtcggccgtgccgggcactccgtcggcgccgtctccgaaggctcg
ttttaccccaagcaccgcgccgacctcgtgcagtccgccgccaccgtggagcgcatgcgc
gccgggctgatcgaggaactgaccgtccccgccaacccactcgacgtgctgctgcagcag
accgtggctgccgtcgccgccggagacgtgctcgccgacgactggttcgccaccgtccgc
cgctcccacccctaccgcgacctggaccgggacgtcttcgactcggtgatcgacctggcc
gccggctcttacccgtccaccgacttcgcggaactcaagccacgcatcgtctacgaccgg
atctccgggatgctctccgcccggcccggcgcgcaacgggtggcggtgacgaatgcgggc
acgatcccggaccgcggcatgttcggcgtgttcctgctgggcggggagggggcgccgcgg
cgggtgggggagttggacgaggagatggtctacgagtcgcgcgtcggtgacgtgttcacg
ctcggggcgtcgagttggcgggtcgaggacatcacgcgcgatcaggtgttggtgactccg
gcgccggggcacacgggtcggctgccgttttggtcgggggacgcgcaggggcgtccctat
gagctggggaaggcgctgggggcttttcgacgcgaggccctcgccgaccccgaccgcctc
gacgggctagggctcgatgacaatgcgcgctccaatttggtggcgtatctggcggagcag
cgggaggccaccggcgtcgtgccggatgagaagacgttggtggtggagcgtttccgcgac
gaggtgggggattggcgggtggtgttgcacacgcctttcggcaaaggggtcaaccaggcg
tgggcgttggcggtgggtgcgcagatcgcggaggccacgggcatggacgcgcaggcggtc
gccggcgacgacggcatcgttctccgcctccccgagggggagcaggagccggacgcggag
ctgtttaccctggatccggacgacgtcgcggacgtggtcacggagcaggtgggcgggtcc
gcgttgttcgcctcccggttccgggagtgcgcggcccgggccctgttgttgccgcggcgc
aatccaggcaagcgggccccgctgtggcagcagcgccaacgcgcggagcagctgctggac
gtggcgcgcaagtatccgagctttccgatcatcttggagaccgtccgcgaggtgctgcag
gacgtctacgacctgccggcgttgacggaggtgttgcgcgatctgaaggcccgccgtctc
cggatcgcggaagtcaccgtggatcagcccagcccgttcgcgtcgtcgttgctgttcaac
tacaccggcgcgttcatgtacgagggcgacagcccgttggcggaaaagcgtgcggcggcg
ctggccctggatccgagcctgttggcgaagctgctgggcaccgtggagttgcgtgatctg
ctcgacgcggagatcatcgcccaggtccacgcccagctgcagcgcaccggcgaccgggcg
gcgcgcaccggcgaggagctggcggacgtgttgcgggtgctggggccgatccccgtcgac
gagcttgcccggcacaccactttcgaggatccgctgacggtggcccgtcagcagctggct
gggcgcgtcatggaggtgcgcatcgggtcgaggacgcacctggcgcaggtgcaggacgcc
ccgctgttgcgcgacggcctcggggtgcccgtcccgcccggggtgcccgcccaggtggag
acgatcaccgatgccttagaccagctcgtcggtcggtggacgcgcacccgcggcccgttc
gtgcccgaggacgtggcggaggcgttcggcctggctcccggcgcggcgttcagcgccctg
cgccccctgatcgaatccggcaaggtcgtggaaggccgctaccgccaaggcgtcgacgag
gccgagtacgtcgccgccgaggtgctcaagatcatccgctcccgttccttggccgccgcc
cgcgcgcagacccaggccgtctcccaatcggctttcggacggttcctgccggactggcag
cacgtcgcgcccatcggctccacccccgcactccgcggcgccgacggggtcttcgccgtg
ctcgaacaactcgcgggcgtacgcctgtcggcgtcggcgtgggagtcgatggtgctgccc
tcacgcgtcggcgactacaaccccgtccacctggatgagctgacctcctccggcgaggtt
ctcgtcgtcggttcgggcaaaaacgtcatgctgctgcccgccgactacgcgccccagctc
gtcgacgagcccgtcgacgttggcctgacggaggtgcaggagtccctcctggagatcctg
cgccgtggcggcggattcctcttcaccgacctggacgtgccggggacgacggaggagcgt
cgggaagctctgtggggactggtggaggcgggcctggtctccccggacggcttccagccg
atccgggcccggctggcgggcggcgccaccgcgcacaagaccaagcgacgcccgacccgc
tcgcgactgcggatggggcgcgccgggatcgcgcggcagactgttccgccggacatggtg
gggcggtggtcgttgacggtggctccggatacggacgccaccacgcgttcgctggtgcgc
ggggaaacctggttggaacgttacggggtgctcactcgcggcagtgtcgtggccgaggac
gtcgtcgggggctttgccctggcctaccgggtgctctccgggttcgaggaatcaggcaag
gcgatgcgtggttacgtcgtggaggcgttgggcgcctcgcagttttccacgcccgcggtc
atcgaccggctgcgcgggcacgcagattccccggatgtgcagggctggccgtcgggcgcc
gcggagccggcggtgcatgtgctggccgccgccgatcccgccaatccctacggtgcggcg
ctgccgtggcccgcgcaggggccgtcgcgcgccgccggggcgctggtggtgcttgtcgac
ggcctgctcctcgcccacatcacccgcggcgggcgggtgctcaccacgttcttcgactcc
ctaccggcgggtctggaagtgggcgaggaggggctgaccgccatggtcgtgggggcgttg
gccgaggtcgtggcgtcaggcaggatgacgccgctgaccgtcgaaaagctcaacggcgcc
tccgtgttcgactccggcgccgtgccggtgctgcgttccgccggggccgcgttgacgccg
aagggcgtgcgcatcggcggacgctcggccccgccgcgtatgccccggcgcggccgcacc
gtcacggaggccttgggcgagctcagtttcgatgatccgaagtaa

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