Corynebacterium maris: B841_05465
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Entry
B841_05465 CDS
T02784
Name
(GenBank) helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cmd
Corynebacterium maris
Pathway
cmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B841_05465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmd03019
]
B841_05465
03009 Ribosome biogenesis [BR:
cmd03009
]
B841_05465
Enzymes [BR:
cmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B841_05465
Messenger RNA biogenesis [BR:
cmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B841_05465
Ribosome biogenesis [BR:
cmd03009
]
Prokaryotic type
rRNA helicases
B841_05465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGS34566
UniProt:
S5TI60
LinkDB
All DBs
Position
1151049..1153181
Genome browser
AA seq
710 aa
AA seq
DB search
MSITDNATGGVNEPDELNQSESQNNSQGDAAAAAPANQAEKSTGEANTSEAVDSETAQNA
DTDNATTTRTNASEEAEAADLSAESAAPDADTKKNKDTDAPSGFDGLGLPEIVLDAVKKV
GFETPSAIQEQTIPLLMDGRDVVGLAQTGTGKTAAFALPVLARIDKRERSPQALVLAPTR
ELALQVADSFQSFADNLGGIQVLPIYGGQAYGIQLSGLRRGAQIIVGTPGRVIDHLKKGT
LDISNLRYLVLDEADEMLNMGFQEDVERILEDTPDDKQVALFSATMPNGIRRISKQYLND
PVEIAVKGETRTATNITQRYLLTAHRNKLDAFTRILEVTEFEAMIVFVRTKHETEEVAEK
LRARGFSAAAINGDIAQNQRERTVDQLKDGRLDILVATDVAARGLDVERISHVVNYDIPH
DTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERATNATLEEMALPTVDEVNESRK
EKFADSITESLESKQLELFRSLVRSYSEEKDVPMEDIAAALAAQAQAGADFLMKEPPKDK
RRDRQDRDKWDRDDRRGRDRDRGGRDRRDGDFETYRLEVGKRQHVRPGAIVGALANEGGL
NSKDFGRITIAVDHTLVELPKNLDRGVLDRLSDTRISGQLINIERDAGATHPPRERGGGG
GRGGYRGGRDRDDRGGYRGGRDRGGDRGGRGGYRGGRDRDDRGGRGGWRD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgtgaatgagccggatgaactgaaccagtcg
gaatctcagaataactcgcaaggtgacgcagcagcagctgcccccgccaaccaggcggag
aagagcaccggggaagcgaacacttctgaggcagtcgactccgaaaccgcgcagaacgcg
gacacggacaacgcaaccactactcgcaccaacgcctcggaagaagcagaagccgctgac
ctcagcgctgagtctgccgcccccgacgctgacaccaagaagaacaaggacaccgatgcc
ccgtcgggattcgacgggctcggcctgccggagatcgtccttgacgccgtcaagaaggtc
ggcttcgaaacgccgtccgccatccaggagcagaccattccgctcctgatggacgggcgc
gacgtcgtcggcctcgcccagacgggcaccggcaagaccgccgcgttcgcgctgccggtc
ctggcccgcatcgacaagcgggagcgctccccgcaggccctggtcctcgcgccgacgcgt
gaactggccctgcaggtcgccgactccttccagtccttcgccgacaacctcggcggcatc
caggtcctgccgatctacggcggccaggcctacggcatccagctctccggcctgcgccgc
ggcgcccagatcatcgtgggcaccccgggccgcgtcatcgaccacctgaagaagggcacg
ttggacatctccaacctgcgctacctggtgctcgacgaggccgacgagatgctgaacatg
ggcttccaggaggacgtcgagcgcatcctcgaggacaccccggacgacaagcaggtcgct
ctgttctctgcgacgatgcccaacggcatccgccgcatctccaagcagtacctcaacgac
ccggtggagatcgccgtcaagggcgagacccgcaccgcgacgaacatcacccagcgctac
ctgctgaccgcgcaccgcaacaagctggacgcgttcacccgcatcctcgaggtcaccgag
ttcgaggccatgatcgtcttcgtgcgcaccaagcacgagaccgaggaagtggccgagaag
ctgcgcgcccgcggattctccgcggccgccatcaacggcgacatcgcgcagaaccagcgt
gagcgcaccgtcgaccagctcaaggacggccgcctggacatcctggtggccaccgacgtc
gccgcccgcggcctggacgtcgagcgcatcagccacgtggtcaactacgacatcccgcac
gacaccgagagctacgtccaccgcatcggccgcaccggccgtgccggacgctccggcgag
gcgatcctgttcgtcaccccgcgtgagcgccgcatgctccgctccatcgagcgcgccacc
aacgcgacgctcgaggagatggcgctgccgaccgtcgacgaggtcaacgagtcccgcaag
gagaagttcgcggactccatcaccgagtccctggaatccaagcagctcgagctcttccgc
tccctggtccgttcctactccgaggagaaggacgtgcccatggaggacatcgccgcggca
ctggccgcgcaggcccaggccggcgcggacttcctgatgaaggaaccaccgaaggacaag
cgccgcgaccgtcaggaccgcgacaagtgggaccgcgacgaccgtcgtggtcgcgaccgc
gaccgcggtggccgtgaccgtcgcgatggcgacttcgagacctaccgcctcgaggtgggc
aagcgccagcacgttcgtccgggagccatcgtcggcgccctggccaacgaaggcggcctg
aactcgaaggacttcggacgcatcaccatcgccgtcgaccacaccctggtcgaactgccg
aagaacctggaccgcggcgtgctggaccgtctcagcgacacccgcatctccggccagctg
atcaacatcgagcgcgacgccggcgcgacccacccgccgcgtgagcgcggcggcggtggt
ggacgcggcggttaccgcggcggacgcgaccgcgacgaccggggcggctaccgtggtggc
cgtgaccgtggcggcgatcgcggcggacgcggtggctaccgtggcggacgcgaccgcgac
gaccgtggcggacgcggcggctggcgcgactag
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