Corynebacterium maris: B841_06780
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Entry
B841_06780 CDS
T02784
Name
(GenBank) helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cmd
Corynebacterium maris
Brite
KEGG Orthology (KO) [BR:
cmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmd03019
]
B841_06780
Enzymes [BR:
cmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B841_06780
Messenger RNA biogenesis [BR:
cmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B841_06780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGS34829
UniProt:
S5SUG0
LinkDB
All DBs
Position
complement(1464371..1467058)
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AA seq
895 aa
AA seq
DB search
MTHLDEFISGLDFALDDFQIAGCKAVEADHGVLVCAPTGAGKTIVGEFAVSVALSRGTKC
FYTTPIKALSNQKYHDLVAVHGEEAVGLLTGDVSINSNAEVVVMTTEVLRNMIYAGSHTL
DRLTHVVMDEIHFLGDRDRGAVWEEIILNLDESVNVIGLSATVSNSEQFGDWLSAVRGDT
EVIVTDHRPVPLDQWMMVGRKIYPLFEPGSDVVNDELERRIERIESTDTSGEDYRQGRGF
RARSDNGGDKYRPLGRPEVVQVLEGRNMLPAIFFIFSRAGCDGALAQCHRSRKVLTTQEE
GEEIKRIIDEGVEGIPEEDLEVLRFRQWRSALSRGFAAHHAGMLPAFRHIVEELFVKGLV
RVVFATETLALGINMPARSVVLEKLVKFNGEAHVDLTPGQYTQLTGRAGRRGIDVMGNAV
VQWAPAMDPRAVAGLASTRMYPLLSTFEPGYNMAVNLLNMNGFEASLRLLEKSFAQYQTD
GSVVDDVRQMERVEDRIAQLRSQLPPEDAEEVMEYARLRRELSDEERESRRHSVEQRSME
TSAVLSKLQVGEVIAVAGRKKPILAVVVTPANQTRDPRPWVTTESGWSGRIDASGFQNPP
IVVGRMRLPRNVTHHPRKNTKFVVDSFRRQRFDRPKKMKTTPRARDSKKVVALRRQLRDH
PVHAWPAREREEMARIGEKFTRAERDLARLQKKVTPSDTLGKHFERIINLLTEMDYVEIS
SGEPEVTDEGERLAKIHNVSDLLVAQCLKRGIWDELDPAELAGVASLCAFEARKTTGGEP
TAPTDPMVDAMNATERLWTQLAADEKRHRLPVSKEPEAQFALAMHQWTAGAPLGYCLAAA
AESGAELTAGDFVRSVLQVIDLLEQVAKTGYTDEIRRNARRAVDSARRGVVAIGT
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgacccacctcgacgaatttatttccggcctcgacttcgccctcgatgattttcagatc
gcaggctgcaaggcagtcgaggccgatcacggggtgttggtgtgcgccccgaccggagcg
ggaaaaaccatcgtcggtgaattcgccgtctcggtggccttgtcccgcggcaccaagtgt
ttctacaccaccccgatcaaggcgctgagcaaccagaagtaccacgacttggtcgcggtc
cacggcgaggaggccgtgggactgctcaccggggatgtgtcgatcaactcgaacgcagag
gtggtcgtcatgaccaccgaggtgctgcgcaacatgatctacgccgggtcgcacacgttg
gaccggttgacgcacgtggtgatggatgagatccatttcttgggcgaccgcgaccgcggg
gcggtgtgggaggagatcattctcaacctcgatgagtcggtcaacgtcatcgggctgtcc
gcgacggtgtccaactcggagcagttcggcgattggctcagtgccgtacgcggagacacg
gaggtcatcgtcaccgaccaccggccggtgccgctggatcagtggatgatggtcggccgg
aagatctacccgctgtttgaacccgggtccgatgtggtcaacgacgagctggagcgccgg
atcgagcggatcgagtccacggacacctccggcgaagactaccgccaggggcgtggtttc
cgggcgcgcagcgacaacggcggcgacaagtaccgcccgttgggtcgcccggaagtcgtc
caggtgctggaggggcgcaacatgctgcctgcgatcttcttcatcttctcccgcgccggt
tgtgacggcgcgctggcgcagtgccaccgctcccgcaaggtgctgaccacgcaggaagag
ggcgaggagatcaagcgcatcatcgacgaaggcgtcgagggcatcccggaggaggatctg
gaggtgctgcgctttcggcagtggcgctcggcgttgtcgcgcggtttcgccgcccaccac
gcgggcatgttgccggcgtttcgccacatcgtggaggagctgttcgtcaaggggctggtc
cgggtggtctttgccacggagacgttggcgttgggcatcaacatgccggcgcgcagcgtg
gtgctggagaagttggtgaagttcaacggcgaggcccatgtggatctgacgccggggcag
tacacgcagctgacgggccgggcggggcgccgcggcatcgacgtcatgggcaacgcggtg
gtgcagtgggcgccggcgatggacccgcgtgcggtggcggggttggcgtcgacgcggatg
tatccgctgttgtcgacgtttgagccgggctacaacatggccgtcaacctgttgaacatg
aacggcttcgaggcgtcgttgcggttgctggagaagtctttcgcccagtatcagaccgac
gggtcggtggtcgacgacgtgcgtcagatggaacgggtggaggatcggatcgcgcagctg
cgctcgcagctgccgccggaggacgccgaggaggtgatggagtatgcgcgcctgcgccgc
gagttgagcgacgaggagcgcgagtcgcgccgccacagcgtggaacagcgttcgatggag
acgtcggcggtgctgtccaagttgcaggtcggggaggtcatcgcggtggccgggcgcaag
aagccgatcctggcggtggtggtgaccccggcgaatcagacgcgggacccgcgtccgtgg
gtgaccacggagtccggctggtcggggcggatcgacgcctccggtttccagaacccgccg
attgtggtgggccggatgcggctgccacgcaatgtgacgcatcatccgcgcaagaacacg
aagttcgtggtggattctttccgtcggcagcgcttcgaccggccgaagaagatgaagacc
accccgcgggcccgggattcgaagaaggtggtggcgctgcgtaggcagttgcgtgatcat
ccggtgcacgcgtggccggcccgggagcgcgaagagatggcgcgcatcggggagaagttc
acccgcgcggagcgggatttggcgcggctgcagaagaaggtgaccccctcggacacgctg
ggcaagcatttcgagcgcatcatcaacctgctcacggagatggactacgtcgagatctcc
tccggggagccggaggtcaccgatgaaggcgagcggttggcgaagatccacaacgtgtcg
gatctgttggtcgcccagtgcctcaagcgtggcatctgggatgagctggatccggcggag
ttggccggggtggcgtcgttgtgcgcttttgaggcgcgcaaaaccaccggcggggagccg
acggcgccgacggatccgatggtggatgcgatgaacgcgaccgagcgcctgtggacgcag
ctggccgcggacgaaaaacgccaccggctgccggtctcgaaggagccggaggcgcagttc
gcgttggcgatgcatcaatggacggccggtgcgccgctgggatattgcctggcggcggcc
gcggagtccggggcggaattgaccgccggtgacttcgtgcgctcggtgctgcaggtcatc
gatctgctggagcaggtggccaagaccggttacaccgacgagatccgccgcaacgcccgg
cgcgcggtggattccgcccggcgcggggtcgtggcgatcgggacgtag
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