Cyanidioschyzon merolae: CYME_CMA019C
Help
Entry
CYME_CMA019C CDS
T00175
Name
(RefSeq) RNA polymerase III transcription factor IIIB
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CMA019C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
CYME_CMA019C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Ribosomal_S27e
Zn_ribbon_PaaD
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
16992094
NCBI-ProteinID:
XP_005535026
UniProt:
M1V3G8
LinkDB
All DBs
Position
1:54408..57269
Genome browser
AA seq
953 aa
AA seq
DB search
MVRHTPRRGSGVGTAAPAVASTSRAKHGPVAATAVPQQASTPPCDVSGEDHASQPGASAE
TLEVPSDFGCDDLRPAASATRDSGKHLEPDAERFGSLEQVRQEAEAGTELTRSALGPRQV
RKRVVQRRSATGAAERAPVSTHPPSDAAPRSGTSVGGTNTGQSGQDAWHPAGASGPDAPE
TPAAFITSAAVPESTGADLRWTPAPSSEHLTRGAVVMRSPQVDGPATAVIKRCPNCGGDD
LEFGSSSGQTACMLCGHVVEENTVVNELQFVEGAGGHSAVVGQFVRTGSSGAASLGAAAA
ATAAGASLLYNASTAGVTRLTIGHRESRELTYAAGRRRIATIASQLHLPPRFVDAAHRLF
TLAVQHNFVQGRRTQTVAAAALYIVCRREKTPHLLIDFSDTLRINVYVLGHTYLKLCRVL
HLALPIIDPSFYIHRFASRLDLGEKQNAVAQTALRLISRMKRDWIHTGRRPAGLCGAALL
IAARMHGFRRSQREIGAVVRVGDMTIRQRLCEIEETPTGTLTGRELAAESGLIESVAEED
TTEAPLAATADTSANAVSPEAVDTLDGCDPPAFRRRHALSSSSSLEWLEQQHHVLEQSKA
AEQDIVADTSLTEQERAFLEASATAEGERVPVTVLVAPATSHGAVSNYVGSVRREASGPL
APLGAAADERAANPVTTGVIAGTSGLSTRSGPEGGANYRWLSDRVEELSDLDSEEEAMFV
CTPEETAFREKIWTAMNQEWIEREAEIARWERDDPERYQRLMRKREYMRGFYKSNASNSA
AAEAPWSHSATATAAAAAVATTTTAAAAAAAAAAAAAAPGGERPSTVAPAAVEAVVRSVR
DAVRSAVTHSKRTSKKINYDALEQYDLGGRGDSIPTNDAETVAVADAAGRPSQPAPSLFD
FGDQPAPERRPPVAQSSIPAPTRVAKRVVRQQQHHQQQQQRAASATPQPTHQT
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggcacacgcctcggcgaggttcgggtgtgggcactgcagccccagcggttgcg
tccacatccagagcaaagcacggacctgttgctgcaacagcggtgccacagcaggcatcc
acacccccgtgcgatgtctctggagaggaccatgcgtcccagccaggcgcctcagcggag
acgcttgaggtgcccagcgactttgggtgcgacgacttgcgccctgcagcaagcgcaacc
cgggattcgggcaagcacctggagccggacgccgaacggtttggctctttggaacaggtg
cgtcaggaagccgaagcaggaacggaactgacgcgctctgcactgggtcctcgccaagtg
cggaagcgagtggtgcagcgtcggtccgcgacaggcgctgcagagcgagccccagtgagt
acgcacccgccgtctgatgcggctccaaggagcggcacctctgtcggaggaaccaacaca
ggacagagcgggcaggatgcttggcacccagcgggtgcttctggaccggatgccccggaa
accccagctgcgttcatcaccagtgctgctgttcccgaaagcaccggtgctgatcttcgt
tggacgcctgctccctcatcggagcatctcaccagaggcgctgtcgtcatgcgttcgcca
caggtcgacggaccggccacagccgtcatcaagcgctgtccgaactgcgggggtgatgat
ctcgagtttggtagcagttcgggccaaacagcgtgcatgctctgcggacatgtcgttgag
gagaacaccgtagtcaatgagctccagttcgtagagggtgctggcggtcacagtgccgtc
gtaggtcagttcgtacgcaccggcagcagcggagcagcgtcgctgggcgcagccgctgca
gccaccgcagccggtgcgtcgctgctctataacgcatccacggccggtgtgacgcgtctc
accatagggcatcgggagtcgcgggaactcacgtacgcagccggacgccggagaatcgcc
accatcgcttcgcagttacacctgccgccgcggtttgtggatgcagcgcatcgtttgttc
acgctggctgtccagcacaatttcgtgcagggcaggcgtacccagacggtggcggctgca
gcgctctacattgtctgtcgacgggagaagacgccgcatctgctcattgactttagcgat
acgctgcgtatcaatgtgtacgtcctgggtcatacttatctgaaattgtgccgcgttctg
catttggcattgccgatcattgatccttcgttttacattcaccggtttgcaagtcggtta
gatctgggcgagaagcagaatgcagtagcgcaaaccgcactgcgtctgatcagtcgaatg
aagagggactggatccatactgggcggcgtccggctggtctctgtggggcagcactgctc
attgcagctcgtatgcacggcttccgtcgctcgcagcgtgaaataggtgccgtcgttcgt
gtcggtgatatgaccattcgccagcgactctgtgagatcgaagagacgcccactggaacg
ctcactggtcgagagcttgccgccgagtcgggcttgatcgaatccgttgccgaggaagac
accaccgaggcgcctctggcggcaaccgcggatacctccgcaaacgcagtgtcacctgag
gcagttgacacactcgacggctgcgacccgccagcgttccggcgccggcacgcgttgtcg
tcgtcgtcgtcattggagtggctcgagcagcaacaccacgtcctggaacagagcaaggca
gctgaacaggacattgtcgcggatacctcgcttaccgagcaggagcgagcttttctggaa
gcctccgccactgccgagggcgagcgcgtacccgtaacggtactggtggcaccggcaacg
tcccacggtgcagtctcgaactacgtcggctcggtgaggcgcgaggcctcgggacccctg
gccccgcttggcgctgcagcggatgagcgtgccgcaaacccggtgacaacgggcgttatc
gctggtacatctggtctgtcgacgcgatccggccccgagggcggagcgaattatcgctgg
ctaagcgaccgagtcgaagagctcagcgacctcgactccgaggaggaggctatgttcgtg
tgcacgcccgaggaaactgcctttcgggagaaaatatggacggcgatgaaccaggaatgg
atcgagcgtgaggctgaaatcgctcgttgggaacgcgacgatcccgagcggtaccagcgt
ctcatgcgcaaacgagagtacatgcgtggtttctacaaatccaacgccagcaacagcgcc
gctgctgaagcgccctggagtcacagcgccacagcaacagcagcagcagcagcagttgca
acaacaacgacagcagcagcagcagcagcagcagcagcagcagcagcagcagcgcctggt
ggcgagcgtcccagtacagttgcacctgccgcagtcgaggcggtcgtgcgctccgtacgc
gacgctgtgcgcagcgcagtgacgcactcgaagcgtacgagcaagaaaatcaactatgat
gccctagaacagtacgaccttggcggccgtggcgactcgattccaacaaacgatgccgaa
acagtcgcagtcgcagatgctgccgggcgtccatcgcagccagcaccgagtctgtttgac
tttggtgatcaacctgcacccgagagacgaccaccggttgcgcagtcgtcgataccagca
ccaacgcgcgtagcgaaacgcgttgttcggcagcagcagcaccatcaacaacaacaacaa
cgcgccgcctccgctacccctcaaccgacgcaccagacatga
DBGET
integrated database retrieval system
