Cyanidioschyzon merolae: CYME_CMA093C
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Entry
CYME_CMA093C CDS
T00175
Name
(RefSeq) ATP-dependent DNA helicase RecQ
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03440
Homologous recombination
cme03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CYME_CMA093C
03460 Fanconi anemia pathway
CYME_CMA093C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cme03032
]
CYME_CMA093C
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMA093C
Enzymes [BR:
cme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYME_CMA093C
DNA replication proteins [BR:
cme03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CYME_CMA093C
DNA repair and recombination proteins [BR:
cme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CYME_CMA093C
Bloom's syndrome complex (BTR)
CYME_CMA093C
FA (Fanconi anemia) pathway
CYME_CMA093C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
16992154
NCBI-ProteinID:
XP_005535083
UniProt:
M1V9X3
LinkDB
All DBs
Position
1:289919..294730
Genome browser
AA seq
1603 aa
AA seq
DB search
MPLVPEFRVIFRCSSAVRTMEELRAYLRERRHAELFGFLNRHAGVDDAGNLVTVDAGGAS
RSTGGCAGTFPEALREPDSKTTARGGALQAESSGQLLNLDSEMKNRELESQRFQNSLSAA
GTLPPDGGVSSPKARSVSERPAARLVRDPAQPYRGASQHGAHGVKNIPESLDPSQPDDNE
LWLVSELGASSNDERTVRSHDSVSEVPDPPAAKSRPDEGAFSMNLRPGSQTHMKALRASD
VEWVCERRSLKRGPIAGSDSGDLVMNYDGTREHEASNATVAFPESTHGGTRSPVSGTSSD
EDIFESILGENRQYTFSVPKRARIRCMELPDMDEILSSLREAEPVSAKCETDQRERSEAS
VCSGTSHCGSPKAAVSPIDGHRNVVKPLGDSTKSNVLPAEIDLRDQLPNSGAVPATPHAP
TTFGGRTSFVSPYVAPKQQHPQRTASPESASMRSPGKAALPETKHSSTRVIPHATRHGES
PSSPVVVCDTSSTLPRELNESSGTIASTDHRREGPGSDRPSAPEKMRSEPSALLLKKRQV
ALERLMRLEDEFLETIDAEQAERLHTLIEKTKSAIQHIDRCLGNDVATKKAASCIPNPDV
DSQSQRMASLANAAALSASGARPSGTHDAENASPANPANSSSGESAFRCSASTKDVVTLT
GLRSERYGSMAGASGAAPACVGKIGETSDRAVDAAEVHMAMTDHYHEEQPVSRLYDKSSV
PVIEGSTGAPAVPVQMTTSDAVDLDEVFEAACAQASAEFAGDNYPWSAQLHHNNRVQFGN
QGFRANQKEAINAAMCGRDVFVLMPTGGGKSLVYQLAATLTGPAGCGVTVVVSPLKSLIM
DQVMRLQALRIPCGALCGATSETESRELMRDLRSLHPKTRILYVTPEKISLSEAFRSILD
WLASRKLLARFVIDEAHCVSQWGHDFRPDYKRLSLCKQRYPSVPLMALTATATREVREDV
KVQLGIPRCVTFKQSFNRPNISYEVYLKGPRSKTVEWIAEFIQNEMPRGASGIIYCFSKQ
ECEDVAKALRRQFRIAAEHYHAGLTDESRIAVQQRWMRRATQVIVATIAFGMGIDKPDVR
FVIHYTMPKNVEGFYQESGRAGRDGQPARSIVLFSHADQRRLIGMIDKNSNGLTRAALSL
QKDAVKRMAAWCLDDVSCRRVTVLAHFGERFDRRACSPPCDNCRNQAPCQMEDWTATARG
AYQLAQWMQDVRRITPTSARIASGLRGFESFRTTVGASPDVDIPGFGSAPPGANDNDIFR
LLAEMERLHILHEEVYHNEVHGGVCGCLRPVPGSQSPIVHDLLYGNERRIYLLVRRGKHG
LQAIRLRSEMVRATSGRKRGVASATGATDAFPEDTNDSVSIGNTTKSHAESVRNRLLELR
RSWCKQHKGLRADSALSTTEIDSIVRIAPKSLTELAALRRRSRNPDRQVPDALVWQAIHG
DQSDSAVISGDGMLPRDALPGASSRHAHPTASASAPGVLLSDEDSIDSGDDVTVVGARSA
SIDSPAKSATCIHRKNGQRSTGRRQSHRTGHAPKAALAQRTGKRPARVNERGPRLSRSQE
SCPVGRFQRSGGPSRRKPSRTEALASSDYGSAAPWTGNEAMPL
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttgtgccggagtttcgagtgattttcaggtgctcgagcgccgtgcgaactatg
gaggaacttcgtgcatacctccgcgagcgcagacacgctgaactctttgggtttctgaat
cgccacgctggtgtagatgatgctggtaatcttgtaacggtggatgctggtggcgcctcc
cgcagcactggtgggtgcgcgggtacgttccctgaggcgcttcgagaaccggactcaaaa
actactgctcgagggggcgcgctccaagcagaatcttctggacaattacttaaccttgat
tcagaaatgaaaaatagggaattggagtcgcagcgcttccagaacagtctatccgctgct
ggtacgcttccacccgatggtggagtctcgagcccgaaagcccgcagcgtgtcggagcgc
ccagcagcgagactggtgcgagatccagcacagccgtatcgcggagcttcccagcatggc
gcgcatggtgttaagaacattcccgaaagtttggacccgagccagcctgacgataacgag
ctctggctcgtgtcggagctcggggcgtccagtaacgacgagcgaacagttcgtagtcac
gacagtgtatctgaggtgccggacccgcccgcagcaaagagcaggccggatgaaggggcg
ttctcgatgaacctgagacctggaagccaaacacacatgaaagcgctgcgagcctccgac
gtagaatgggtctgtgagcgccgttccttgaaaagaggtcccattgcagggagcgattcc
ggcgatttggtgatgaattatgatgggacaagagagcatgaggcgagcaatgcgacagtt
gcgttccctgagagtactcatggtggaacgagatctcctgtatcgggcaccagctcagac
gaggatatatttgaatccatcctcggggaaaatcggcagtacacgttctctgttccaaag
cgtgctcgcattcggtgcatggaattgccggatatggatgaaatccttagttcgttacgg
gaggcggagcctgtgagcgctaagtgtgagacagaccaacgggaacgaagcgaggcgagc
gtgtgctcgggaacaagtcactgtggctcacccaaagcagcagtttcgccaatcgacgga
catagaaacgttgtcaagcccctaggagattctaccaaatcaaatgtgctgcccgctgaa
atagatttgcgggatcaattgccaaatagtggagcggttcctgcgacgccgcatgcaccg
acaacatttggaggccgcacgtcctttgtctcaccgtatgttgcgcccaaacaacagcat
cctcaaaggacagcaagtccagaaagtgcatcgatgcggtcaccagggaaggccgcactg
ccagagacaaagcactcgagcactcgagtgattccgcatgctacgcgtcatggtgaatcg
ccaagcagcccggtggtggtgtgcgacacctcgtcaacgcttccccgtgagttgaatgag
tccagtggaacaatcgcatctactgatcatcgccgagagggtccaggatcagatcggccc
agtgctcctgaaaagatgcgttctgagccttctgctcttcttctgaaaaagcggcaggtt
gccttagagcggcttatgcgattggaagacgaatttctcgagaccatcgatgcagaacaa
gctgaacggctgcacacgctcatcgaaaaaacgaaatcagccatacagcatattgatcga
tgtctcgggaatgacgttgctacgaagaaagcagcaagctgcataccgaatcctgacgta
gattcacaatcccagcgaatggcgagcttagcgaacgctgcggcgctctcggccagcggt
gctcgcccgagcggaacacatgacgcagaaaacgcgtctcccgcgaatcccgcaaacagc
tcatctggcgagagtgcgtttcgttgcagcgcctccactaaggacgtcgtcacgttaacg
ggactgcgaagcgagcgctacggctccatggcaggtgcatcaggagcagcgccagcttgt
gtcggcaagattggtgagacctcagatcgtgctgtcgacgcagccgaggttcacatggcc
atgactgaccattaccatgaagaacagcccgtatccagactttacgacaaatcaagtgta
cctgtaatcgaaggcagcacgggggcgcccgctgtcccggtccaaatgacaacatcagac
gcagtggatctcgatgaggtcttcgaagcggcctgtgctcaagcttctgccgaatttgct
ggtgataactatccgtggtcagcacagctgcatcacaacaaccgtgttcagttcggtaat
cagggatttcgtgccaatcagaaagaggcaatcaatgcggccatgtgtgggcgcgacgtt
ttcgtcctgatgcccacagggggcggcaagtctctcgtctatcagctggccgcgacgctc
acgggaccagcgggctgcggtgttactgtcgtggtctcgcctctgaaatcgcttatcatg
gatcaagtgatgcgtttgcaggcgctgcgtattccatgcggtgccctgtgcggcgcgacc
tcggaaacggaatctcgagagcttatgcgtgatcttcgcagcttgcatccaaagactcgg
attctttacgtgactcccgagaaaataagtctttcggaggcgtttcggtccatactcgat
tggcttgcctctcgaaaacttctcgctcgattcgtgatcgatgaggcgcactgcgtgagt
cagtggggccacgacttccgccccgactacaagcggcttagtctctgcaagcaacgttat
ccgtccgtcccgctgatggctctgacggccacagcgacaagagaggtgcgagaagatgtc
aaagtgcagctaggcatcccacgctgcgttactttcaaacagagtttcaatcggccgaat
atttcgtacgaggtttatctcaaggggcctcgttccaagactgtggaatggatcgccgag
ttcatccaaaatgaaatgccgcgcggtgcttcaggcattatctactgttttagtaagcaa
gagtgtgaggatgtagcgaaagcattgcgacgccagtttcgcatcgcagcggagcactac
cacgctggtctcacggacgagagtcgcattgcggtccagcaacgttggatgaggcgggcc
acgcaggtcattgtcgccaccattgcctttggcatgggcatcgataagccggatgtgcgc
tttgtcattcactacaccatgccaaagaatgttgagggcttctatcaggaaagcgggcgc
gctgggcgcgacggtcagcccgcccgctctattgtactcttctctcatgcggatcagcgg
cggctgatcggcatgatcgacaagaactcgaacggtctcacgagagcggcgctatcgctt
cagaaagacgctgtcaagagaatggcggcctggtgtctcgacgacgtcagttgccggcgc
gtgacagtgttggctcactttggcgaacgcttcgatcgtcgagcgtgcagtccgccgtgc
gataactgtcggaaccaggctccctgtcaaatggaagactggacggctacggcccgcggt
gcgtaccaactggcgcaatggatgcaggacgtgcggcggataacgccaacttcggccagg
atcgcctctggtctgcgaggtttcgaatcctttcgtactaccgtaggcgcttcaccggac
gtggatataccgggtttcgggagcgccccgcctggtgccaacgacaatgacatctttcgt
ctactcgcggagatggagcgactgcacattctccatgaagaggtctaccacaacgaagtg
cacggtggcgtctgcggttgtttgcgtccagtaccggggagccagtctccgattgtgcac
gatttactatacggtaacgaacggcgtatttatctgcttgttcgacggggcaagcacggc
cttcaggcgatccggctgcgttcagagatggtgcgcgctacttcaggacgcaagcggggc
gtcgcatctgcaacaggtgccaccgatgccttcccagaagacaccaatgattcggtatcg
atcgggaacaccaccaagtcgcacgcagaatcagttcgaaatcgtcttctggagctccgc
cgaagctggtgtaagcagcacaagggcctgcgggcagactcagccctttcgacaacagag
atcgacagcattgtgcgtatagcaccaaagagtttgacagaacttgcagctctacggcgc
cgttctcgtaatcccgatcgccaggtccccgatgccctcgtttggcaagccattcatggc
gaccaaagcgactctgctgtgatatctggcgacggcatgttgcctcgcgacgcgctgcct
ggcgcatcgagtcgacatgcgcacccaactgcgagtgccagcgctcccggagtactgtta
tccgacgaggattccatagattccggtgatgatgtaacagttgttggtgctcgctctgcg
tccatcgacagtccagcgaagtcggcgacgtgcatccatcggaagaacgggcagcgttca
acagggcgccgccagagtcatcgcactggtcacgccccgaaggcggcgctggcgcagcgt
acggggaaacgtcccgcacgggtcaatgaacgaggacccaggttgtctcggagccaggag
tcgtgccccgtgggccggtttcagcgcagtggcggccccagtcgcagaaagccaagtcgc
acagaggcgctcgcatccagcgactacggcagtgccgccccgtggactgggaacgaggcc
atgcccctgtga
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integrated database retrieval system
