Cyanidioschyzon merolae: CYME_CMB112C
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Entry
CYME_CMB112C CDS
T00175
Name
(RefSeq) similar to nucleoporin
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CYME_CMB112C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMB112C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMB112C
Messenger RNA biogenesis [BR:
cme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CYME_CMB112C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CYME_CMB112C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
16992316
NCBI-ProteinID:
XP_005535204
UniProt:
M1VEJ0
LinkDB
All DBs
Position
2:complement(310223..313546)
Genome browser
AA seq
1107 aa
AA seq
DB search
MFGRNASTQPSNNQLAGAFGANPPTQTPTQSLFSTQSQPGTQTALSQAGGWPAAQPGPNT
GSASMSPFGGNANTSSTFGSSPFGSASFSGGLRPGVTGAPGAAAGGGALSGSGSAWQAGT
SGSQPLALGAAPSQGTGQVAFRPVPSSETTAHGTKQVLFDSIVFMSGFESKSFEELRFED
YQLGNRGQSGPGGSSAPSGTGGGSLFGNLGSSSTTNTGLFGAAKPSTGLTAPSGLFRSDA
GTSGAASPFGASAISGTTFGQQQNTSAGSTGGAFGSAPSAGGFGNANATGSGTGFGIPGQ
NAGQSGGLFGGGVGSSATTSFGSNQAGSGTGAGNAPFGSGLFGSNANARPSPFAGAPGST
TGAFSSFGASAGSNTNQPAVSAALGTSGAFPTSGTVGAPASGGLGFGGSRPLGTGTSFGT
LNATQNTSSLSNTMPSFGGGLGGNAPGSFFGGSGSGSTQSAGLVGGGAPGTAGSFGAGGS
GIGGGGGTGGQPGQAPSAQSSLPRFSLGGFGAAQANQPSGQSTGAGAAQSGTSTGGLFGT
GSTTVTAGGAPAFQSGNASTPRSEQTGIFGAANQTSAKPTGDLFRFGVSSSGSNLGGTQP
GGGASTSGGMFGLGGSAFRPLASPNANMGPMQPATSTGMPSGLGFGLGGGSGSGAMPAFG
AATNASPQGIPFQTQPASNASSASPYGPLPTLSGAAGNISTDAERWQGTRVTSEPVLDTT
HASLLAPLASIPNAPVTSYRVRPRSQVRAFSYGASIGGVPLHELFDRPRAVARGRPNQTP
GDSWSSVWTPGRLRQTENGKPERSIRQLIRDAAAQGQTEPTLTLADITTQEAVLASPSAN
LLDRDASPERTRATNVDAPGTVTPSFAADMSPIVPLRSSQGTEKRSGKESAATPGSEQTP
GAHFEYHAQGPVSSGASTSDQGDRLPAWVPRLTKPGYYTKPPLAELQSLDEAALSHVSNF
VLGRRHIAEIRFLEPVDLRYANLDQIVQIEPRTIILYPTRDTDAMPPKGTRTTAQQQQQQ
QQQQQQPSRSDRWSGLPPPGQGLNRRALLRFEQVFRMDKRTGKPTNDPQAIERFRQRLQE
YAEQQGARFVSYDAETGTWELLVEQFS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtagaaacgcgtctacgcagccgtcgaataaccaactggcgggtgctttcggg
gcaaatccaccgacacaaaccccaacacagtcgctgtttagcacacagagccagccgggc
acccaaacagcgctgagccaggctggcggctggccagcggcacaaccaggcccaaacacg
ggctcagcgtcaatgagtcctttcgggggcaacgcgaacacatcaagcaccttcgggtca
agtccttttgggagtgcttcgttttctggcgggttgcgcccgggtgtgaccggagccccc
ggtgccgctgctggcgggggtgcgctctccggaagcggtagtgcctggcaagcgggcacc
tcagggtcacagcctcttgctctgggtgccgcaccgagccagggcactggtcaggtggct
tttcggccagtaccaagctcagaaacaacggcacacggaaccaaacaggtactcttcgat
tcgatcgtgtttatgagcgggttcgaatcgaagagcttcgaggaactccgtttcgaagac
taccagctgggtaaccgggggcaaagcggccctggaggtagttcagcacccagcggaacg
ggtggtggctcgctctttggaaaccttggcagttcctccacaacgaacacaggacttttt
ggtgcagcaaagccatcgaccggtttgactgctcccagcggtcttttccgcagtgacgct
ggtacctcaggagccgcttccccgtttggtgcatcggcgatctcgggaacgacattcgga
caacaacaaaacacatccgctgggagtactgggggtgcatttgggtcggcaccctcagct
ggtggtttcgggaatgcaaacgccacaggttctggtacgggattcggtatccctggacaa
aacgcgggtcagtcaggcggcctctttggcggtggtgtcgggtcctctgctacgacatca
ttcggatccaatcaagcagggagcggaacgggtgctgggaatgcgccctttggctctggt
ttgtttggatcgaacgcaaatgcccgaccttcaccctttgctggtgcacctggatcaacg
accggtgctttcagcagctttggagcgagcgccggatcaaatacaaatcagccagcggta
agtgcagcactgggcacctcgggcgcttttcctacgtcaggcactgtcggtgcgcctgca
agcggtggcctcggtttcggtggatcgcggccgctgggcactggaacatcattcggtacg
ctgaacgcgacccagaatacgagtagtctcagcaatacaatgccatcgttcggaggcggt
ctcggaggcaacgcgcccgggtcgtttttcggcggaagcggcagcggatccacgcagtcg
gcgggcctggttggaggcggcgcaccgggtacggcaggcagcttcggtgctggtggcagt
ggtattggaggcggtggtggtactggtggccagcctggtcaagcaccaagcgcacagagc
tcgcttccgagatttagtttgggcggatttggtgcagcgcaagcgaatcagccaagtgga
caatcaaccggtgctggtgccgcacagagcggcaccagtaccggtggcctctttggcaca
gggagcactacggtgactgcaggcggagcgcccgcgtttcagtcaggaaacgcaagtaca
cctcgttcggagcaaactggcatattcggagcagcgaaccagacgagtgcgaagccgact
ggggatttattccgctttggagtgtcatcgagtgggtcgaacctaggcggcacacagcct
ggcggcggtgcctcaacttctgggggcatgttcggtcttgggggatcagcattccgaccc
ttggcgagcccaaatgcgaatatgggtcctatgcagccggctacgagtactggaatgccg
tctggactaggttttggcctcggtggtggtagtggcagtggtgcgatgcctgccttcggt
gctgccacgaacgcttctccgcaggggattccgtttcaaacgcagcctgcaagcaacgcc
agtagcgcatcgccgtacggcccgctgccgacactctcgggcgctgcgggcaacatctcc
actgatgcggagcgatggcaagggactcgagtcacctcggagcctgtgctagataccacg
catgcgtcgctgctggccccactagcatcgataccaaacgcgcccgtgacgagctatcga
gttcggcccagaagtcaagtgcgagccttctcatacggagcctccattggtggcgtcccg
ctccatgagttgtttgaccgacctcgagcagtcgcccggggtcgtccgaatcagacgcca
ggcgattcctggtcgagcgtatggacacccggacgcctgcgccagaccgagaatggcaaa
ccagaacgaagcatcaggcagctgatccgcgacgcagccgcacaaggacaaaccgaaccg
acattgacgctcgccgatattaccacgcaggaagcagtgctggcgagcccgagcgcaaac
cttctggatcgggatgcgtctccggagcgaacacgtgccaccaacgtcgacgctcctggt
accgtaacgccttcatttgctgccgacatgtcacccatcgtaccactgcgcagtagccag
ggtacggagaagcgctccggaaaagagtcagcggccacaccaggctccgagcagacgcca
ggtgcgcacttcgagtaccacgcacagggaccggtgtcgtcaggagcctcaacgtccgat
cagggcgatcgattgccagcttgggtgccgcgactcacgaaaccagggtactatacgaaa
ccgccgctcgccgagcttcagtcccttgatgaagcagcactctcccatgtctctaacttt
gtactaggccgtcgccacattgccgaaattcgtttcctggagccggtggatttacgctac
gccaatctggatcaaattgtgcagattgagccgcgcacgatcatcctgtacccgacccgc
gatactgacgcgatgccgccgaaaggcacccgcacgactgctcagcagcagcagcagcag
caacaacaacaacaacagccatccaggtccgatcgatggagtggtctcccgcccccggga
cagggcctgaatcgaagggcgctcttgcgttttgagcaggtgttccgtatggacaaacga
accggaaagccaacgaatgatccacaagcgattgaacgatttcggcaacgattacaagaa
tacgcggagcagcagggcgcacgtttcgttagttatgatgctgaaactggaacctgggag
ctgcttgttgagcagtttagctag
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