Cyanidioschyzon merolae: CYME_CMB144C
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Entry
CYME_CMB144C CDS
T00175
Name
(RefSeq) similar to suppressor of Ty 6 Spt6
KO
K11292
transcription elongation factor SPT6
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CMB144C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMB144C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CYME_CMB144C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CYME_CMB144C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
Motif
Other DBs
NCBI-GeneID:
16992347
NCBI-ProteinID:
XP_005535227
UniProt:
M1UNH4
LinkDB
All DBs
Position
2:396041..402382
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AA seq
2113 aa
AA seq
DB search
MEPVEHTNSSEVSAAARATQDHNDEREGAPVSGAVVPAEADPLSHLVQEQSALQALHKRA
PRIMDDPDFEGESRDPVLQVDKDDEGPRPAAAEPTTLQRVATTSDESILGNASPASERGL
VSDTLPHATDADVTDEWARRRKRTRSSPELAEGDIELLREAGVVIPERQLHPGGRRSRRR
RRLRQAADLEMTSENDDDENDKIEASPDTTSVAPFGMIGDRDEADRAAGAVDAQKFTSVG
EKQASLPASPHQAANATVGASGLGAGIGGTDDQNLADEASIDQNSEIEEEEIGSDDDEDD
LADFIDYGDGAAGQRRRRLARERARAALQASLRGGRLSSELDPYAAALLRELFGDADSLE
NYRGEPLLYHDDPEQIRKWLQRIGVNDPRDIENVLSLESWAVPEPSSAEEDASTGAEASK
SAGHESLSVEQTELLAEMYATPQDDAIRALDLPEYTQLYHCGRDQAGNPLPRELMDESDI
RYEAEWIVTNGLVDLLRSSRQAAPESSLVDQVAHLLRFLHLEHLDIAFIAMYRRDYLEPD
LLPPLERGTGEQQAPVLESPTHFVGDWTRLWRVLDWDRYYFQFLQQKRRLMDVYEEQGEE
ELLQLATAAFRREMLQDVEKYARLRRELAHGDKNGSASASAGREEAASPESLRQVAAETL
LAPSTDAYQRQEHRTAAAAAAEAANGSIHPEVGLDSEAAGTVSDDAMDQLQQATAAAALR
HASDDEEHRDAAPVHSTETLTPTIGNAEAMQPRARAKNSNSSSSNSRSDLQRTNAEIATS
AEQPGTLQPRQVHPQAPGRRRAGRTPSRRDALHVAISWVVAHQLDVEALYGIKAADLASN
VLSGGSLITEPADHPNKPSLEELLRSTDVTESTAAVGIERYLRYVRQVAGALYAAHPRLR
HFTRTRLREKAHLTVKPSARALQDLDILDPLRPYCSVEALPVAALDPAEMARFIYAERLG
LVEHMECSLAAPDEAELESILERALLSDKLYESAQVWNAARRQMLTEQLLRVWLLPPLLA
ELLECLREEARGACALAAVSALEQQLVIGGASPSSASTNAHEPGAFGVLSGTAAGGVLAF
VVSDESEYPTTRSRWIFGVALDAYGQVLDTLRLGCHGWLPGDERLLGQLVAAQQAKSGGA
AAAAAAAAAAAGASALEMPPQVRSRLERFLQRHPHRQCVAIGVASGSPIGVNAASLWLYE
WIRGIEQRLGSRREQAVGRQPHVLRIDDDAARLYAKTKTLSASLGGMVPPECDGLPLRRA
VGVARLCQEPLAVYAAIATEASLGALLRLTVRCRPQHQQQQQQQQQQQQMLDSTRRTDET
GDTTATADAAGHDATSWQQVTDPSLHTQLDLGLDGMVTSPSDRLLVVERALRHAVASLGL
DLNLLLRYRHLQPLMAFAPGLGVRKASLFIQTLRNQFSRGATRPPSVPSRQAVLRSKAAT
RRVLDSLIAYLRVSSGIHGTTSGGPGATGEASTTLQGASAAAYARERLAQWRRRASSVDV
STWRPLDETRIHPVDEPLAMKIVVESLREHDPRYWNAERLASTPAAVLVLHLLEHPEAIE
ELDLPGYAAHLEQAGHGRKRHILFLIANEFYRPFADWRRTRSSLQGKALFYACTDLDECL
FGYGTRVHAFDGRPVERGSAWRCRVVPATASVASDWLPGRLEAAQVPAVWRQVRQAATWG
SMWPASVHARAEERYFGTPSVAALGQVPLLPLRVKAVDGEALQVQLMALEPLPAELAWLA
ERMAHLPGRVPLESVSRSAPPGTTAGTAGVDAFNTSSAAAAAAAATNHLSSSTLLSQRAS
RVLPTGLLRHPAYRALSGRQVVQELAQAPPGTVYYRPCSRDAQAVCASFKIHDEAPIVHL
DLLVVESVGSGSGAVAGNATGASAGAAPAAAGSGEHVTQQWQLRLDAELFDDLDEVFARY
IEPIVQLAWRATQHPKFMLVGEHDNAAAATTALEALLRQEKAKAPSTIPYRLAFCRHRPA
HLVFAYLPGRATVLYEPITLTPTGYRLRDQVFSSVDDLVSWFKRNWQRLLRSQTGPPRQQ
ATEADSDAVLASLGAGAVAVGASAGNRYQSEASAAYGAQVGVDQRVPVVGSLVQLAQRAL
ERSGAGTGRHAPR
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgttgaacacacaaacagcagcgaggtatccgctgccgctagagcgacccaa
gatcacaacgacgaacgagagggagcaccagtgagcggggcggtggttcctgcggaagct
gatccgctatcccatctagtgcaggaacagagtgccctacaagcgctgcacaaacgggcg
ccccgaatcatggacgacccggatttcgaaggggaatcccgtgacccagtgctccaggtt
gacaaagatgacgaaggtccacgaccagcagccgctgagcctacaacgctccagcgtgtc
gcaaccacgtcggacgaaagcatactgggaaacgcttcaccggccagcgagcgcggactt
gtttcagacacattgccacatgcaacagatgcagacgtgaccgatgaatgggctcgtcgc
cgcaaacgtacgcgttcgagtccagaactcgccgagggtgatatcgaactcctgcgtgaa
gccggtgttgtgattccagagcgacagttgcatccaggaggtcgtcggtctcgccggcgt
cgacgacttcgccaggccgcagacctggagatgacctctgagaacgacgatgacgaaaac
gacaagatcgaggcttcccctgatacgacctccgtagcaccgtttggcatgattggcgac
agagacgaagccgatagagctgcaggcgctgtggacgctcaaaagttcacgtctgtcgga
gaaaagcaagcgtcgttgcctgctagtcctcatcaagcagcgaatgccacggtgggtgct
tcaggcctgggtgccggcatcggcggcaccgatgatcagaatctcgcagatgaggcgtcg
atcgaccaaaactctgaaatagaggaagaagaaatcggcagcgacgatgatgaggatgat
ttagccgacttcattgactatggtgatggggcagctgggcaacgtcgccgccgcctcgcc
cgtgaacgagcgagagctgctttgcaagcctcactccgaggcgggcgcctgtccagcgaa
ctggatccttacgctgcagcactgctgcgagagctcttcggtgatgccgattcacttgag
aactaccgcggagagccgcttctctatcacgatgatcccgagcagattcgcaaatggctc
cagagaatcggcgtcaatgatccacgcgatattgagaacgtcttgtcgctggagtcgtgg
gcagtaccagagccgtcgtcagcggaggaggatgcatcgacgggtgcggaagcctccaag
agcgccggacacgagagcctctccgtcgagcagacagagctgctcgcggaaatgtatgca
acgcctcaggatgatgcgattcgtgcactggatttgccggagtacacccaactctatcac
tgcgggcgggatcaagcggggaatccactccctcgcgagctcatggacgagagcgatatt
cgttacgaggcagagtggatcgtcaccaacggactcgtggacctgcttcggtcgagtaga
caggcggctccagagtcatcgctcgtggatcaggtcgcgcatttgctgcgcttcctgcat
ctggagcacctggacatcgcctttatcgccatgtatcgacgagattacctggaacccgat
cttctgcctccgctcgagcgaggcactggcgagcaacaagctccagtgctggagagtccg
acacatttcgtgggcgactggacacgcctctggcgagtcctcgactgggaccgatactat
ttccagttccttcagcagaagcgccgccttatggacgtttatgaggaacagggtgaagag
gagcttttgcagctggctacggcagcattccgccgtgagatgctccaggatgtggaaaaa
tacgcgcgactgcgtcgggagctagctcacggggacaagaatggatcggcatcagcgtca
gcaggtcgtgaagaggctgcaagtcccgagtcgctgcgtcaggtggcagcagaaactctg
ctggcgcccagcaccgacgcctaccagcgacaggagcaccgcaccgcagctgcagctgcg
gcggaagcggcaaacggcagcatccaccctgaagtcggccttgattccgaagctgctggt
accgtctccgacgacgcaatggatcagttgcagcaagcaaccgctgcagctgctttgcga
cacgcgtcagacgacgaagagcaccgggatgcggcacctgtgcactcgaccgagacccta
acgccaacaattgggaatgccgaggccatgcagccgcgagcacgcgcgaagaacagcaac
agcagtagcagcaacagtcgtagcgatttgcagcgtaccaacgctgagatagcgacttca
gcggaacaaccgggaacactgcagcctcgacaggtgcacccgcaagcccctggtcgtcgc
agggctggtcgcactccgtcgcgtcgtgatgcgcttcatgtggcgatatcctgggttgtt
gcacaccagctcgatgtagaggcgctctatggcatcaaggctgccgatttggcctccaac
gtgctctcgggtggcagtctcatcaccgaacctgctgatcatccaaacaagccgtcgctc
gaagaactgcttcgatctactgatgttaccgagagcactgctgccgtcggtatcgaacgg
tatctgcgctacgttcgtcaggtagctggggcgctttatgcggcacacccgcgccttcgg
cactttacccggacgcgtctgcgcgaaaaggcgcacctcaccgtgaaaccgagtgcgcgt
gccctccaagacctcgatatactggatcctttgcgtccgtactgttcagtggaagcgcta
ccggttgcagccctggacccagcagaaatggctcgtttcatttacgctgaacgccttggc
ctggtggagcacatggaatgctcgctagcggcgcctgatgaagcggagctcgagtccatc
ctggaacgcgcgctcctcagcgacaagttgtacgagtcggcacaagtctggaatgctgca
cgccggcagatgctcaccgagcaactgctgcgggtatggttgctaccgccgctgctcgcg
gaactgctcgagtgtctacgcgaggaagcgcgaggtgcttgtgcgctcgcggcagtcagc
gccctggaacagcaactcgtcatcggtggcgcgagtcccagcagtgcatcgacaaacgca
catgaacctggtgcgttcggtgtcctctctggtaccgctgctggtggtgtgctcgcgttt
gtagtctccgacgagtccgagtacccgacgacacgctctcgttggatctttggtgttgcc
ctcgatgcctacggccaagtgctggacacgctgcgtctgggttgccatggctggctgccc
ggcgacgagcggctcttagggcaactggttgcagcgcaacaggcaaaaagtggtggcgct
gctgctgctgctgctgctgctgctgctgccgcgggcgcttcagcgttggagatgccgccg
caggtgcgctcgcgactggaacgcttcctccagcgtcatccgcaccggcaatgtgtcgct
attggggtcgcttctgggagtcctattggcgtgaatgcggcaagtctctggctctacgaa
tggatacgcggaatagagcagcgtctcggtagcaggcgtgagcaggcggttgggcgtcag
ccgcatgtgctgcgtatcgacgatgatgctgctcgcctgtacgcgaaaacgaagactctg
agcgcttcactcggaggcatggtgcctcccgagtgcgacggtctgcccttgcgacgggct
gttggtgtagcgcgactctgtcaggaaccgctggcggtgtatgcagcgattgcaacagag
gcatccctgggtgcattgctgcgcctcactgtgcgctgtcgtccgcaacaccaacaacaa
caacaacaacaacaacaacaacaacagatgctggattctacccgccgtacggatgaaact
ggtgataccacggctacggcggacgctgcaggccatgacgctacaagctggcagcaagtc
acggacccgagtctgcatacacaactggaccttggcctcgatggcatggtgacctcgccc
agtgatcgtctgctggtcgtggaacgagcactgcgtcatgcggtcgcctcactgggcctc
gacctgaacctcttgttgcgctatcgtcatctgcaacctctgatggcgtttgcgcccggc
cttggggttcgcaaagcatcccttttcatccagacgctgcgaaaccagttttccaggggc
gccacacgacccccaagcgtcccgtcacgtcaggcagtattgcgcagcaaggcagcgact
cggcgggtgctcgactcgctcatagcgtatctgagggtttcgagcgggatccacgggacg
actagcggcggtccaggcgccacaggcgaagcgtcgacgacacttcagggtgcttcggcg
gcagcgtatgcacgtgaacgacttgcccagtggagacgacgtgcttccagcgtcgatgtg
tcgacctggcgaccactagacgagacccgcatccacccggtagacgaaccgctggcgatg
aagatcgttgtggagtcgttgcgggagcacgatccacggtactggaatgcagagcgttta
gcgtcgacgcctgcagcggtgttggtgttgcatttgttggagcatcccgaagcgatcgag
gagctcgacttgcccggctacgcagcgcacctggaacaggctggacacggtcgtaagcgg
cacattctattcctgattgcgaatgagttttaccgaccatttgcggattggcgtcggacg
cgctcctcgttacaaggcaaagcgctcttctatgcctgcaccgacctggatgagtgcctg
tttggctatggaacgcgggtgcacgcctttgacggacgtcctgtagagcgcggtagcgct
tggcgttgtcgtgtggttcccgcaaccgcctcggttgccagcgactggcttcctggtcgt
ctggaggcagcacaagtgccggcagtctggcgacaagtccgccaggcagcgacatggggc
agcatgtggcctgcttctgtgcatgcacgggcggaggagcgctacttcggaacgccctcg
gttgctgccctggggcaagtgccgctcttaccgcttcgcgttaaggctgtggacggagag
gcgctccaggtgcagctcatggcgctggagccgttaccagccgagcttgcgtggttggcg
gagcgaatggcgcacctgccgggtcgagtgccgctggagtcggtgtcgcgaagcgcgcct
cctggtaccaccgcaggcactgcaggtgttgacgcttttaacacatcgagtgctgctgct
gctgctgctgctgctacgaatcatttgtcctcttcgacgctgctatcccaaagagcatca
cgtgtgcttcccacgggcctgttgcgccatcctgcgtaccgtgcgcttagtgggcgtcag
gtggtgcaggagcttgcccaagcgccgcctggcaccgtctattatcgtccctgttcccgc
gatgcccaagcggtatgtgcttcgttcaaaatccacgacgaggcgcccattgtgcacttg
gacttgttggtggtggagtctgtggggtccggttccggtgcggttgccggaaacgccact
ggtgctagtgctggtgctgctcctgctgctgctggtagtggcgagcacgtcacacagcag
tggcagctgcgtctggatgcggagctcttcgacgacttggacgaggtttttgcacgctat
attgaaccgattgttcagctcgcctggagagcgacgcagcatcccaagtttatgcttgtt
ggtgaacacgacaacgctgcggcggctaccacggcactggaagccttactacggcaagag
aaggccaaagctcccagcaccatcccctatcgactcgcgttttgtcgacatcgtccagcg
catttggtgtttgcgtatctaccgggtcgagcgactgtgctgtacgagcccattaccctc
accccaacaggttaccgacttcgtgatcaggtgttctcgtcagttgatgacttggtcagc
tggttcaaacgcaactggcagcgtttgttgcgttcgcaaaccggaccaccgcgacaacaa
gcgacagaggctgattcagatgcggtgctggcgtcactgggagcaggagcagttgccgtg
ggtgcatcggctggaaaccgttaccagagcgaggcctctgctgcgtacggggcgcaagtt
ggtgtcgaccaacgggtacctgttgtgggttctttggtgcaactcgcgcagcgagccctt
gagcgttccggagcgggcactggtcggcatgcaccgcgttaa
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