Cyanidioschyzon merolae: CYME_CMC045C
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Entry
CYME_CMC045C CDS
T00175
Name
(RefSeq) 60S ribosomal protein L40, ubiquitin fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03010
Ribosome
cme04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CYME_CMC045C
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CYME_CMC045C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cme03011
]
CYME_CMC045C
04121 Ubiquitin system [BR:
cme04121
]
CYME_CMC045C
Ribosome [BR:
cme03011
]
Ribosomal proteins
Eukaryotes
Large subunit
CYME_CMC045C
Archaea
CYME_CMC045C
Ubiquitin system [BR:
cme04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
CYME_CMC045C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Plexin_RBD
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
16992431
NCBI-ProteinID:
XP_005535274
UniProt:
M1VEP4
LinkDB
All DBs
Position
3:107708..108094
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGLIEPSLAALARQYNCEKMICRRCYARLPARAHNCRKRKCGHSSN
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaaccctcacaggcaagactataacgttggaggttgagccctct
gacactattgagaatgtgaagagcaagattcaggacaaggagggaattccgcccgaccag
caacggcttatttttgcgggaaagcagcttgaagacggacgcacactcagcgactacaac
atccagaaggagagcacgctgcacctggtattgcgcctgcgaggtgggctcatcgaacct
agtttagcggcactcgctagacagtataactgtgagaagatgatatgtcggaggtgttac
gcacggctgccggcgcgcgcgcacaactgccggaagcgaaagtgtgggcactcgagcaac
ctgcggccaaagaagaagatcaagtag
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integrated database retrieval system
