Cyanidioschyzon merolae: CYME_CMD026C
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Entry
CYME_CMD026C CDS
T00175
Name
(RefSeq) RNA polymerase II subunit G
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03020
RNA polymerase
cme03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYME_CMD026C
09124 Replication and repair
03420 Nucleotide excision repair
CYME_CMD026C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CMD026C
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMD026C
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMD026C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
CYME_CMD026C
Messenger RNA biogenesis [BR:
cme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CYME_CMD026C
DNA repair and recombination proteins [BR:
cme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CYME_CMD026C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
Motif
Other DBs
NCBI-GeneID:
16992582
NCBI-ProteinID:
XP_005535404
UniProt:
M1VF13
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All DBs
Position
4:complement(78180..78704)
Genome browser
AA seq
174 aa
AA seq
DB search
MAFFILELTKSVTVHPRHFHAKLPDHVINRLLTLTEGTTSGLYGYLLAVVEVERPLPPGR
ILPGTGHAIFRLRYKALVYRPFLGEVLDGVIASVTRHGVFVAVGPLSVFVSARNVPSDME
FDDSEQCFASVVQGSEDRLEVGTMVRLRIVGMRRDATEIAAVGTLRADYLGVLG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctttatactggaactcacaaaaagcgtcacggttcatccgagacattttcac
gcaaagcttcccgatcacgtcatcaatcgactgctgacactgaccgagggaacaacctcc
ggcctctatggttacctgctcgccgtggtcgaggtcgagcgaccactcccgcccggtaga
atccttcccggaaccggacacgctatctttcgacttcgttacaaagcgctggtatatcga
ccgttcttgggtgaggttctggacggtgtcatcgcatcggttacgcgacacggggtattc
gtggcggtcggaccgctcagcgttttcgtgagcgcgcgtaacgtccccagtgacatggag
tttgacgatagcgagcagtgcttcgcctctgttgttcagggtagcgaggatcgattagag
gtaggcaccatggtacgcttgcgtattgtgggtatgcgtcgtgacgctacggagatcgcg
gccgtcgggacgctgcgggccgactatctaggcgttctgggctag
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