KEGG   Cyanidioschyzon merolae: CYME_CMD026C
Entry
CYME_CMD026C      CDS       T00175                                 
Name
(RefSeq) RNA polymerase II subunit G
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03020  RNA polymerase
cme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CYME_CMD026C
  09124 Replication and repair
   03420 Nucleotide excision repair
    CYME_CMD026C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cme03021]
    CYME_CMD026C
   03019 Messenger RNA biogenesis [BR:cme03019]
    CYME_CMD026C
   03400 DNA repair and recombination proteins [BR:cme03400]
    CYME_CMD026C
Transcription machinery [BR:cme03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CYME_CMD026C
Messenger RNA biogenesis [BR:cme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CYME_CMD026C
DNA repair and recombination proteins [BR:cme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CYME_CMD026C
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 16992582
NCBI-ProteinID: XP_005535404
UniProt: M1VF13
LinkDB
Position
4:complement(78180..78704)
AA seq 174 aa
MAFFILELTKSVTVHPRHFHAKLPDHVINRLLTLTEGTTSGLYGYLLAVVEVERPLPPGR
ILPGTGHAIFRLRYKALVYRPFLGEVLDGVIASVTRHGVFVAVGPLSVFVSARNVPSDME
FDDSEQCFASVVQGSEDRLEVGTMVRLRIVGMRRDATEIAAVGTLRADYLGVLG
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcgttctttatactggaactcacaaaaagcgtcacggttcatccgagacattttcac
gcaaagcttcccgatcacgtcatcaatcgactgctgacactgaccgagggaacaacctcc
ggcctctatggttacctgctcgccgtggtcgaggtcgagcgaccactcccgcccggtaga
atccttcccggaaccggacacgctatctttcgacttcgttacaaagcgctggtatatcga
ccgttcttgggtgaggttctggacggtgtcatcgcatcggttacgcgacacggggtattc
gtggcggtcggaccgctcagcgttttcgtgagcgcgcgtaacgtccccagtgacatggag
tttgacgatagcgagcagtgcttcgcctctgttgttcagggtagcgaggatcgattagag
gtaggcaccatggtacgcttgcgtattgtgggtatgcgtcgtgacgctacggagatcgcg
gccgtcgggacgctgcgggccgactatctaggcgttctgggctag

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