KEGG   Cyanidioschyzon merolae: CYME_CMD156C
Entry
CYME_CMD156C      CDS       T00175                                 
Name
(RefSeq) coatomer protein complex, subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
cme  Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:cme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cme04131]
    CYME_CMD156C
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cme04147]
    CYME_CMD156C
Membrane trafficking [BR:cme04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    CYME_CMD156C
Exosome [BR:cme04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   CYME_CMD156C
  Exosomal proteins of bladder cancer cells
   CYME_CMD156C
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 COPI_C WD40_Prp19 B-prop_COPA_B_2nd WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd TPR_COPA_B WDR55 WD40_Gbeta Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 16992704
NCBI-ProteinID: XP_005535503
UniProt: M1VAP0
LinkDB
Position
4:complement(410511..414800)
AA seq 1429 aa
MLVSFESKSSRVKGLSFHPKRPWLLASLHSGAIQLLDYRLATVIDTYHEHEGPVRGIAFH
PSQPLFVSGGDDAKIKVFHYGLRRCLFTLTGHADYIRTVQFHHELPWIVSASDDQTVRVW
NWQNRTCLAVLSGHNHYVMCASFHPAEDLVVSASLDQTIRVWDISGLGGGSANAAQAIAA
VTAAGLWGSSANANALAPGRDQGTGFGTGSAPWSALAPQSTGGGMGAPSMSGFGGSSGST
LGSGAYGGGTGGISGVIERLGGGLDVAVKFTLEGHTRGVNWVSFHPSLPLIASGADDRTI
KLWRYTESRAWEVDTLRGHVNNVSCVLFHPHLDVLVSNSEDKTIRVWDLSRRSCIAIYRR
EMDRFWILAVHPRLSAMAAGHDSGCMIFKLHRERPPFTMLENGVLVYVRDRFVRALELDT
GREWPVCMARGRQPANDTGSSWPGMSGEGTTGLSALGGSNGISAPGVLFGLSTGNAVLTP
PPRSLQYQPLDRALLLQYDADGGFAELYQLPQRIEEPRNVSGDSPDLQVEPRRVPALSSV
LLGQGRWLTLEEDALLLRDLSQGSERRIPLPATGIRFMFPATAGLVLFASRDQVHLWDWQ
RQKLLATLDAPLIRYAVWSEDRTYLALLAKHTLWIVNRQMERLALLHETMRIKSAAWDES
GVLVYTTTSHLKYCLPNGDAGIICSLKEPLYLTWVRGPAVAALDRRAQPQTLAIDPTEYT
FKLLLWRKQYDRVRQALAESRLPGKSMIGYLQQKGYLDIALWFTEETQTRFVLALSAGYL
QTALDMAGQMDDDEAWSSLAEKAMEYGQVQLAELCFQRLRNLERLLFLYVLTGNWEKLER
LYDIADAQKDIPAQLQIALVLGDPESRVQTLKKAGLDALASLLSATYEPEDATAGSYVAG
VEKLQTPLAPVDATLAQENWPLMPTSESVDAHHASEGVAAGAFDGAARQAASIAPANDLY
EASVSQHSSTGYLASDWTAAAGRLGDAMHTGDYTERSNSMTMGDADAHVANEAGFLGFAA
NAATDAADGWADTLDLELPPDAVTSPSSSQDRHAMAAGDALHPSAALDAAAAAAPAASVT
TSSLSHSLADIPVEPGPLTQEIWRAQARVPGEWVIAGEPQRALALLVEQICLADPVVLHP
VLRALHAAAWHAVPSPSCASLSLSRIDQTPCVASADETPAPAAFVMIDRLEQQMEHIFGL
VTRGAFGEADRLLLSLLWVMPFAIVRSAADDAKLRSLISTCREYRLGMRLMLEQKTCRAR
GLDSDADRARLMQLSALFTHCNLEPPHLLLALRAAMKLAYELQFDALAVRFAQRVLETEP
APELVAAANKVIALAERRRRSEQRSSTSKQEAVSRVLPLDMYDEQRIFAIDAELLVPIHD
RGAVRSCPYCTATYTSATRCVVCQLSSLDASQRTASGLIFWTQGVTSST
NT seq 4290 nt   +upstreamnt  +downstreamnt
atgcttgtttcgtttgagtccaagtcgagcagggtaaaaggcctgtcttttcacccgaaa
cggccgtggctgctcgcatcgctgcactctggagctatccagttgcttgattatcgacta
gcaacggttattgacacttatcatgaacatgaaggcccggtgcgggggattgcgttccat
ccgagtcagccgctgttcgtttctggaggcgatgacgcgaagatcaaagttttccactac
gggctgcggcgttgtctcttcacgctgaccggccatgcggactacattcgtacggtacaa
tttcatcatgaactgccgtggatcgtatcagcttctgatgaccagactgttcgggtgtgg
aactggcaaaatcgcacgtgcttggcggtgctcagtgggcataatcactacgtgatgtgc
gcaagttttcatccagctgaggatttggtggtatctgcgtcgcttgaccagacgattcga
gtgtgggatatctccggtttgggtggtggatctgcgaacgctgcccaagctatcgcagct
gtcacggctgcaggtctctggggatcgagcgccaacgcgaatgctttggcacccggccga
gaccaaggcaccggcttcggtaccggtagtgcgccctggtctgcactagccccgcaaagt
acgggtggaggaatgggtgcgcctagcatgtcagggtttggtggctcctctggatctact
ttggggtccggtgcatatggtggcggcaccggcggaatcagtggagtgatcgagcgcctc
ggtggcgggctcgatgtcgctgtgaaatttacgctcgaaggccatacacgcggcgtgaac
tgggtcagcttccatccgagtctgccactcatcgcatcgggtgcagatgatcgtacaatc
aaactctggcggtacacggaatcacgggcctgggaggttgacaccctacgcggtcacgtg
aacaacgtgtcatgcgtgctgttccatccgcatcttgatgtgctcgtctcgaattcggaa
gataagacgattcgcgtgtgggatttgtctcggaggagctgcatagcgatctacaggcgt
gaaatggatcgattctggattctggcagtgcaccctcgtctcagtgcaatggcggcgggt
catgattccggctgcatgattttcaaactccaccgggagcggcccccgttcacaatgctg
gagaatggcgtgcttgtgtacgtgcgggatcggttcgttcgggcgctcgagctggacaca
ggtcgagagtggcccgtttgtatggcccgcggacggcagccagcgaatgatacgggatca
tcctggcccggcatgagcggtgagggcaccacgggcttgtcggcactggggggaagcaac
ggtatttccgcgcctggtgttctgttcggcctcagtacgggcaacgcggtgctgacgccg
ccaccgcgctccctccagtaccagcctctggatcgtgcgcttttactgcagtacgatgcg
gacggtggcttcgccgagctgtatcagctgccacagcgcatcgaagaaccgcgtaacgtt
tccggggactctccagatttgcaggttgaacctcgtcgcgtaccggcgctctcgtcggtt
ttactaggacaaggccgctggctcacactcgaggaagatgccttgctcctccgcgatctg
tcgcagggtagcgagcgtcggataccgctgcctgcaactggcattcgatttatgtttccg
gctacggcaggtcttgtgttgtttgcgtcccgcgatcaggtgcatctctgggactggcag
cggcagaaactgcttgcaacgctcgacgcaccgctcattcgatacgcagtttggtcggag
gatcgaacgtacctggcgttgctggcgaagcacacgctctggatcgtgaatcgacaaatg
gaacggctcgcgcttctccatgagaccatgcgtatcaagtccgcagcctgggacgaatcc
ggcgttctagtgtatacgaccacgagtcatctcaagtactgcctgccgaacggtgatgct
ggcatcatctgttctctgaaagaaccgctctacctgacgtgggtacgcggacccgctgtt
gctgcgcttgatcgccgggcgcagccgcaaactttggcgatcgatcccaccgaatacacg
ttcaagctgttgctttggcgaaagcaatatgaccgtgttcgtcaagcgcttgccgagtca
cgacttcccggcaagagcatgatcggttacctccagcaaaagggatacctcgatattgcg
ttgtggtttaccgaagaaacacagacgcgtttcgtgctcgcgctcagtgctggctatctg
cagacagcgctcgacatggcgggccagatggacgatgacgaagcctggtcgagtttagcg
gaaaaggcaatggaatatgggcaggttcagcttgcggagctctgttttcagcgtcttcgg
aatctggagcgtttgctgtttctatacgttctgacgggcaactgggagaagctggaacgt
ctctatgacatcgccgatgcccaaaaggatatccccgcacagctgcagatcgcgttggtc
ctcggcgaccccgaaagtcgtgtgcagacgctcaaaaaggctggccttgatgccttagct
tccctactgagcgcaacgtacgaacctgaagatgcaacggcagggtcatacgttgcgggt
gtcgagaagttacagacaccgctcgccccggtggacgccacgctggcgcaggagaattgg
cccctgatgccaacgtcggagtccgtcgacgcgcatcatgcatcggaaggcgtcgcggca
ggcgctttcgacggtgctgcgcggcaggcggcgagcatcgcgccggctaatgacctctac
gaggcatccgtgagtcagcattcgagcacggggtatcttgcgagtgactggacggcagct
gctggccgtttgggtgacgcgatgcacaccggtgactacacagagaggtcgaacagcatg
acaatgggcgacgcggatgcgcatgtcgcaaatgaggccgggttcctgggttttgctgcg
aacgctgcaacggatgctgctgacggctgggcagatacattggacctggaactacctcca
gacgcagtgacgtcgccgagcagctcccaagaccggcatgcgatggcggctggcgacgct
ttgcatccgagtgctgcattggatgctgcagcagcagctgctcctgctgcaagcgtcacc
acatcgagtttatcacattcgctggccgatattcccgtggagcccggtccgttaacgcag
gagatttggcgtgcccaggcccgggtacccggcgaatgggtgattgcgggagagcctcag
cgggcgctggcactgcttgtagagcagatatgtctggcggatcccgtggtacttcatccg
gttctgagggcgcttcatgcggcggcgtggcacgcggtgccgtccccgtcttgtgcttct
ttgagcttgtcgcgaatcgatcagacgccttgcgttgcgagcgcggatgagacaccagcc
ccggcagcattcgtgatgatcgatcgactcgaacagcagatggagcacattttcggtctg
gtaacacgcggggcctttggcgaagcggatcgcctgctgctatcactcctctgggttatg
ccgtttgcgattgttcggagcgctgcggacgacgcaaaacttcgctcgctgatcagcact
tgtcgagaatatcgtctcggcatgcgtctaatgctggaacagaaaacttgtcgagctcgc
ggtctcgacagcgacgcagatcgagcgcgactcatgcagctgtctgcactattcacgcac
tgcaacctggaaccgccgcatttgctgttggcgcttcgtgcggccatgaagctcgcctac
gagttgcagtttgatgcacttgctgtgcgctttgcgcaacgtgtgctagagacggaacca
gcgccggaacttgtcgctgccgcgaacaaagtgatcgccttagcggaacgtcgacggcga
agcgaacaacgctccagtacctcgaaacaagaagcagtgtcacgtgtgctaccgcttgac
atgtacgatgagcagcgcatctttgccatcgatgcggagctgctggtacccatacacgat
cgcggagcagtgcgatcgtgcccgtattgtacggcaacatacacctcggcaacgcgttgt
gtcgtctgccaactatcgagcctggatgcctcgcagcgtacggcatcgggtttgattttt
tggacacaaggcgtgacgtccagtacttga

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