KEGG   Cyanidioschyzon merolae: CYME_CME016C
Entry
CYME_CME016C      CDS       T00175                                 
Name
(RefSeq) signal recognition particle receptor alpha subunit
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03060  Protein export
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CYME_CME016C
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cme02044]
    CYME_CME016C
Secretion system [BR:cme02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   CYME_CME016C
SSDB
Motif
Pfam: SRP54 SRP-alpha_N SRP54_N AAA_30 CbiA AAA_17 AAA_22 AAA_19 NTPase_1 AAA_29 APS_kinase MeaB NACHT ZSWIM4-8_C AAA NOG1 ABC_tran AAA_14 Torsin
Other DBs
NCBI-GeneID: 16992811
NCBI-ProteinID: XP_005535540
UniProt: M1V6W4
LinkDB
Position
5:complement(40065..42059)
AA seq 664 aa
MNWFCIFHLGGLVLFFRDLSEASDAGTDDQHTSAQPESVLRDLVRTVLLAEKAGARIAQL
RKQHLVAWRAANQFQLVFAAEAPSTLELHLLEQFLECCRSSFCQTYGSLLQRRRWSTESD
FDSFAETVDRARATLQLGNTRAVFAADEHAHVGAALQRGRVSSPTPAANTRSSVQTLEDS
QSAVPSSLSAPTTDAPDVHAPGHAGSIKDTLADDDVPIRSNAEPLMNASIPVEAAALETS
THPSNQAKKLSRGSIQRHSARPEQRRPPKKHTKLAAGRRWDDSIPTAEELAALDLSGEAS
CPLGSADDVGRARAAYLETQPRASIFENLTTDEEATNNDMERDVGADGARGSGNLWRTLG
RLAGSRPLTRADLEKPLQYFRDRLIARNVAPTVAEKLTQSVEASLENRTLDALTVHRMVR
AAVEDALQRVLQPLHGTQDLVLAIEQHRQRASIRRPFVIVFTGVNGVGKSTTLAKIAFLL
LQHNLRLLLAAGDTFRAGAIEQLRIHARCLNIPLYERGYGKDPSSVAAAAISQAEQEQRD
VVLIDTAGRMQDNEPLMKALAALVQRAAPERLFFVGEALVGNEAIDQLVKFNQALLRYQQ
GSGGKPRLIDGIILTKFDAVDEKVGAAVTMMYTTSIPIVFVGTGQTYHDLEPVNIPKLVK
ALVR
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgaactggttctgtatttttcatctgggaggacttgttcttttctttcgtgaccttagc
gaagcgagcgatgcgggaaccgacgaccagcacacaagcgcacagcccgagagcgtcctc
cgcgaccttgtccgcactgtgctgcttgccgagaaagctggagcccgaatcgcacagcta
cgcaagcagcatctcgtagcctggcgggcagcgaaccagtttcaactggtgtttgcagca
gaggcccccagtacgctcgagctgcacctactggagcagtttcttgagtgctgccgttcg
agtttctgccaaacgtacggaagcttgcttcagcgtcgacgctggtcgaccgagagtgac
tttgatagctttgctgaaactgttgatcgtgctcgtgcaacgctccagctcggtaacaca
agggcagtgttcgcggcagacgagcacgctcacgttggggcggccctccagcgggggcgc
gtttcgagccctacaccagccgctaatacaaggtcctctgtgcaaactctcgaagattca
cagagcgccgtaccttcgagcttgtctgcaccgactactgacgcacccgacgtgcatgca
ccgggacatgctggcagcatcaaggatacgcttgcagatgatgacgtgccgatacggtcg
aatgccgagcccttgatgaatgcatccatacccgtggaagcagcagcgctcgaaacgagt
acacacccgagcaaccaagcgaagaagctgtcacgagggagcattcagcggcactcagca
cgtcctgaacagcgacgtccgccgaagaaacataccaaactagcggctggacgccgttgg
gatgatagcatcccgactgccgaggaactcgctgctctggacctctccggggaggcgagc
tgtccgctgggtagcgccgatgatgtggggcgcgctcgcgccgcctacctcgagacacag
cctcgcgcgtctattttcgaaaacttaaccacagatgaggaagctacaaacaatgacatg
gagcgcgacgtgggagcagatggcgcaagaggcagcgggaatctctggagaaccctcggt
cggctcgctggttcgaggccattaacccgtgccgatcttgaaaagcctcttcagtatttc
cgggaccgtctcattgcacggaatgttgctccaactgtggcagagaagctcacccagtcg
gttgaggcttcgcttgagaatcgaactttggatgcgcttaccgtgcatcgcatggttcgc
gctgcggtcgaggatgcgctccaacgagtgctgcagcctctgcacggaacgcaggatctt
gttctagctattgaacagcatcgacaacgagctagtattcgtcgtccttttgtgatcgtc
tttactggagtcaacggtgtcggaaaatcaacgacgctcgcgaagatcgcctttcttctc
ttacaacacaatctgcgcttgctcctggcagcaggcgacacctttcgcgctggcgccatt
gagcagcttcggattcatgcgcgctgcctgaatattccactttatgaacgaggctacggt
aaggatccatcgtctgtagctgcggctgccatctcccaagccgagcaggagcagcgggat
gtcgtcctcattgacaccgccggtcgcatgcaagacaatgagccgctcatgaaagcatta
gctgcattggtgcagcgagcagctcctgagcgcttgttcttcgtaggcgaggctctggtc
gggaacgaggccatcgaccagctggtcaagttcaatcaggcgttgctcaggtatcagcag
ggcagcggtggcaaacctcgcctcattgatggcattattctgaccaagtttgatgccgtc
gacgagaaagtcggtgccgctgtcacgatgatgtacacgacctcgataccgattgtcttt
gtgggcactggccagacctaccatgacctggaacccgtcaacatcccgaaacttgtcaaa
gcgcttgtacgctga

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