Cyanidioschyzon merolae: CYME_CME029C
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Entry
CYME_CME029C CDS
T00175
Name
(RefSeq) chromosome assembly complex Condensin, core subunit C
KO
K06675
structural maintenance of chromosome 4
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CME029C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
CYME_CME029C
Condensin II
CYME_CME029C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
16992821
NCBI-ProteinID:
XP_005535549
UniProt:
M1VFG1
LinkDB
All DBs
Position
5:80256..84410
Genome browser
AA seq
1384 aa
AA seq
DB search
MSTEKSDSFSAQDEGTHPTESPCEETKKQRLVIRYIKLENFKSYGGHVCIGPLHRQFNAT
VGPNGSGKSNVIDAILFVFGKRAKQMRSNRVSELIHRSEAYPDAASATVTIEFVQIIDKE
YASENEPDEVVPGSGFTVTRTAARNNTSAYLLNDESITYTELQQFLRSKGIDLDNNRFLI
LQGEVEQISLMKPKAVNPHDTGLLEYLEDIIGSNKLVAPIEEAIQELETLTEERTVRLNR
LKAVDKEREALEEAKFEAEQYLVLEHDIYEKRLQLHELDAKKLEEAKAADEAQYNLAKKQ
LETERDEFSAAEKAVQHLVERRDQTKQAHTEVAKAFEAAKEAFAELERRDVRVREDFKHL
AEREKKAATNIRNEERRHAELEQAQRASRARLGELQQEQPKLETELANAEAALQRVYDSL
RTETTDLRSDMERKQTELLPLREKADAAHQRLSVAQQRLQLLVAKQAAPEQDRVDTEKLI
QTLEKELSELGSRIASEIEPTADAKTRALRDAQVRLENARKAEEEARQQLSRLRRQNEEA
NASHAASSGRNRMLEALWKASQRGSIRGFIGRLGDLGTVPDAFVAALEAAAGSALDHLVV
ENVDDAQACIEMLRENKMGRATFIILEKIRYLQSQIEQSKFPAPEGVPRLFDLLDISNAA
GRLPFYFVLRNTLVARDLEQATRIAFQPTRRNRVVTLSGQLIETSGTMCGGGGGGSSSSS
AASGRGTSRSNVKQSRTCGGNAIQAAPPSAEALAKAEECAAKALETLTACERERDSLLEQ
ARSANQELERARLEKSCLEQRLQDAKNRMKSLNTRSSQAVLEVDEARELVELQASIPHLE
RECAEHDAAASALEALIREQQERILAIGGERLVQSRDAVKKLQDALQAIADEIRKLEIAL
ESNEKTLEKSSEAIRRAHLERQKLEEQRQQRDAELCELEQQAATVLQAQQEHEAQKKALQ
KDLQEIEAELTKHQHALQGWRRHELDLTNRLEKLARELQALQSQIQEHRSQADAARKSML
ELEESMPLLFVRDSASNDDNDDDDDNDDDDDDDDDDHRNDDDDQGDATRNGEPRITDASS
ESGTAEKQTQRRGRRGRRNAGSSAASAEASIDPAERLRLEIAALERSLAELKPNLSAIEE
YQKKEDEYRSRMAELDALTERRDARRRDLDDLRKRRLESFMAGFAIIATKLKEMYQMITL
GGDAELELIDSLDPFSEGIAFTVRPPKKTWKNIANLSGGEKTLSSLALVFALHHYKPTPF
YVMDEIDAALDFKNVSIVAHYIRERARDAQFFIISLRNDMFELASRLVGIYKIHHTSYSV
ALDPGAVALKSAGAADAPVDKENQPVAFVADAAAPAAAVERKSALALSQRSVDGIETRMD
VAFT
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaaaaagcgatagcttttctgctcaggacgaagggacgcaccccacagag
tcgccctgtgaggagacaaagaagcagcgcctcgtcattcgttacatcaagctggaaaac
ttcaagtcatacggaggtcacgtctgtatcggtcccctgcatcgacagttcaacgctacc
gtcggtcccaatggaagcgggaaatccaacgtcatcgacgctatcttgttcgtgttcggg
aagcgtgcgaagcaaatgcgctccaaccgcgtaagcgagctgatccaccgctccgaggcc
tacccggatgcggctagcgcgaccgtcaccatagagttcgttcagatcattgataaagag
tacgcgagtgaaaacgaaccagatgaggtggttcccggaagcggcttcaccgtcacgcga
acagcggcgcgcaacaacacttctgcgtacttgttgaatgatgagagcatcacctacacg
gagctccaacagtttcttcgcagcaagggcatcgatttggacaacaatcgttttctcatt
cttcaaggggaggtcgagcaaatatcccttatgaagccgaaggctgtgaacccgcacgat
acgggtctcttggagtacctcgaagacatcatcgggtcgaacaagctggttgcacccatt
gaggaggccattcaagagctcgaaacactcaccgaagaacgcaccgtacgcttgaatcgc
ctgaaggctgtcgataaggagcgcgaagcgctcgaggaagccaagtttgaagcagagcag
tatctcgtgttggagcacgacatctatgagaaacggctgcaactgcatgaacttgacgcc
aaaaagctagaagaggcgaaggccgctgacgaggcgcagtataatcttgctaagaagcag
ctcgagacggagcgcgacgagttctcagcggcggaaaaagctgtgcagcatctggtcgag
cgacgggatcagacgaaacaggcgcacaccgaggtggcgaaagcttttgaggcggctaag
gaggcgtttgctgagctcgagcgccgcgacgtgcgtgttcgcgaagacttcaagcattta
gctgagcgcgagaagaaggctgccaccaacattcgcaacgaagagcgtcggcatgcggag
ctggaacaggcccaacgggcgtctcgggctcggctgggtgagctccagcaggaacagccc
aaactagaaacggagcttgcgaacgcggaggcggccttgcaacgcgtctatgattccctc
cgaaccgaaacgactgatttacggtcagatatggagcgcaaacagacggaattgctacct
ctccgcgaaaaagcggatgctgcacaccagcgactctccgtagcccagcagcgcttacag
ttgctggtcgcaaagcaggctgcgcccgagcaggaccgcgtagacacggaaaagctcatt
cagacgctggaaaaggagctcagcgagcttggttcgcgcattgcaagcgaaattgaaccc
acagctgacgcgaaaacacgagcacttcgcgatgcacaagttcggctcgaaaacgcgcgg
aaagctgaggaagaagctcgacagcagctcagtcgtctccgacgccagaacgaggaagca
aatgcgtcgcatgccgccagcagcggtcgaaaccgaatgctcgaggcgctgtggaaagcg
tcacagcgaggcagtattcgtgggttcattggccgtctcggtgacctgggcactgttccg
gacgcatttgtcgctgcgttagaggccgccgctgggtcagctctcgatcatctggtcgtc
gagaacgtcgacgatgcccaggcgtgcattgaaatgctccgtgaaaacaagatggggcgc
gctaccttcattatcttggagaaaattcgttacctgcagtcacaaatcgagcagagcaag
tttcctgctccggagggtgtcccacgcctattcgacttgctggacatctcgaacgccgcc
ggccggctgccgttctatttcgtgctcagaaacacgttggttgctcgagatctggagcaa
gcgacacgaatcgcgttccagccaactcggcggaacagggtcgtcactttgtcgggtcag
ctgattgaaacatccggaacaatgtgcggcggcggcggcggcggcagcagcagcagcagc
gcagcctcggggcgtggcacttcgcgttcaaacgtgaagcagtcgcggacatgtggtgga
aatgccattcaggcggcacctccgtcggcagaggcgctcgcgaaagcggaggaatgcgct
gcaaaggccctggaaacgctcacggcttgcgaacgcgagcgagatagccttctcgaacag
gcgcggtcggcgaatcaggaattagagcgcgcccgcctggagaaatcctgtctcgaacag
agactccaggatgctaagaatcgaatgaaatccttgaatacgcggagcagtcaagctgta
ctcgaggtggatgaggcacgtgagctcgttgagctgcaggcaagcataccgcatcttgag
cgtgaatgcgcggagcatgacgccgctgccagtgcgcttgaagcgctcattcgtgaacag
caggagcgcattttggctatcggcggcgagcggttggtccagtcccgcgatgcagtcaag
aaactgcaagatgcgctgcaggctatcgcagacgagatacgcaagcttgaaatcgccctt
gagtcgaatgagaaaacgctggagaaatcttccgaggcaattcgacgtgctcatctagag
cgacaaaaactcgaagagcaacgtcagcagcgggatgcggagctgtgcgaactcgagcaa
caagcagcgactgttttgcaagcgcagcaagagcacgaggcgcaaaagaaagcgctgcaa
aaggatctccaggaaatagaggcggagctcacgaagcatcagcatgcgctgcagggctgg
cgtcgccacgagcttgacctaacgaatcgcctcgagaagcttgctagggagctccaagcg
ctacagtcgcagattcaggagcatcgcagccaggcggacgcggctcgcaagtccatgctg
gagcttgaggaaagcatgcccctgttgtttgttcgagattctgccagcaacgacgacaac
gatgacgacgatgacaacgacgacgacgacgatgatgatgatgatgatcatcgtaatgat
gatgatgaccagggcgatgcaacccgcaacggcgagccgcgcatcacggacgctagctca
gagtctggcacagcagagaagcagacgcagcgacgagggcgtcgaggtcggagaaacgct
ggctcgtctgcggctagcgctgaggcatccatcgaccccgccgagcgattgcgtctggaa
attgccgctctggagcggagcctcgcggagctgaaacccaacctcagcgctattgaagag
taccagaagaaagaggacgagtaccgctcgcgaatggctgagctcgatgccctcacggag
cgtcgagacgcacggcggcgcgatcttgatgacctccgaaaaaggcgactggagagcttc
atggctggcttcgccatcatcgccacaaagctgaaggaaatgtatcaaatgatcaccctc
gggggagacgccgagctggagcttatcgactcgctggatccgttttccgaggggatcgcg
ttcacggtacgaccgcccaaaaagacttggaaaaacatcgccaacctctccggaggcgag
aagacgctctccagcctagcgctggtctttgccctgcatcactacaaaccaacccctttc
tacgtcatggatgaaattgatgctgccctggactttaagaacgtcagtattgttgcacat
tacattcgggaacgtgcccgtgacgcccagttcttcatcatatcactgcgaaacgacatg
ttcgaactagccagccgtctcgtgggcatttacaagattcatcatacaagttacagtgtc
gcgctggatccaggcgctgttgccctcaagtcggccggcgccgcggatgcccccgtcgac
aaagagaaccagcccgttgcattcgtggcggatgctgcggcaccagctgcggccgttgag
cgcaagtcggcgctggctctgtcgcaacgctccgtggacggtatagagacccgaatggat
gtcgcattcacatag
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