Cyanidioschyzon merolae: CYME_CME101C
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Entry
CYME_CME101C CDS
T00175
Name
(RefSeq) RNA polymerase III second largest subunit
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYME_CME101C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CME101C
Enzymes [BR:
cme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYME_CME101C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CYME_CME101C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_5
zn-ribbon_14
Motif
Other DBs
NCBI-GeneID:
16992871
NCBI-ProteinID:
XP_005535609
UniProt:
M1VFL8
LinkDB
All DBs
Position
5:281092..284901
Genome browser
AA seq
1269 aa
AA seq
DB search
MNDPGTANDLELASPVRDLEYKWKLIPLYLQAQPLIRHHIASFNYFVDTELKKIVKWNGY
VTSEASSQWFLKYLDIRVGTPSVYEHVDVQRPLTPHQCRVSDLTYAAPIFVDIEHYHCGR
RETVSNLFIGYLPIMLRSSRCCLLQARSDTELAERFRECPLDPGGYFIVRGAERVIVIQE
QLCKNRMLIELDSRGDLCATVTSSTAERKSRTAVVYRGERLFLRHNTLTEDIPIVVIFRA
MGIRSAAEQVALISWDASLLEPSLEHAERLGVHSASDALRYIGQRLRSLSRLYAWRSAEI
ATEQRQRRKPSLEEEARALLRTLVLPHIPCDGIDFSDKCLYLALMIRGVLAAKANPESLD
DKDYYGNKRLELAGPLLALLFEDLFKKLNADIRRHADQVLAKPSRTQDFDVTRCIRSETI
SHGFEHALSSGNWALKRFRMERQGVTQVLSRLSYVAVIGMMSRITSQFEKTRKISGPRAL
QPSQWGMVCPCDTPEGESCGLVKNLALLADVTTEEEDTAVRRLVYDLGTQDIRALADYDL
ASSESWRSASGDGLRPAGAPDADERPALVFVNGLLLGMHLHPSALTEQLRAHRQRGALGA
FLSIWESSTRAWRAVHVATDAGRVCRPLLVVDRERGTLRLQRRHLEDLELGLLRWEDLLQ
QGIVEYLDPNEENDALIALDIAQLQQDDRQQEQEQRLTQKTNRYTHLEISPESILGACAG
LIPFANHNQSPRNTYQCAMSKQAIGAMAYNQHLRTDALLYLLNYPQRPLVQTRAVEFTHY
HRLPGGQNAVVAVMSYSGYDIEDALVVNRASVDRGLGRCTVLRKYPVSLRVYPNGTRDTI
EPAMTTTTTTTTPTVAYTTATEGAPGTTASISVTGVRSTSGQEPELAAERRRRYLEQALD
SDGIVAPGMPLPPGAILVNKVMPTETLHQPLLRSGPESQAGHSTALTAGAAAGAAAAAAA
GTTGTQRDAAGSLASSWQRSLRRPAPAVYRAPGGAGVVDQVLVTQDQNDLRLIKVMVRQT
RRVVEGDKYASRFGQKGVVGLIPPETDLPWHGNSGIRPDIVFNPHGMPSRMTVGKVFELI
AGKAAALDGCLRDATAFVERTGLDSTEACAEVLLRSGYSYAGRDLLYSGITGEPLAAHVF
FGPIYYQRLKHMAVDKCFGRARGPRAVLTRQPTEGRSRDGGLRLGEMERDSLLGHGASLL
VLERLMYSSDAFTAFVCESCGYLGARDWCQVCRRGDAMQRVLLPYACKLLFQELQAMNIV
TKLRLGEAA
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcctggaacggcgaatgatctagaactagcatcacctgttcgcgatctggag
tacaagtggaagctcattccactctatctccaagcacagccgctcattcgtcaccacatt
gcctcatttaactacttcgtcgacacggagctcaaaaagatcgttaaatggaacggctac
gtaaccagtgaagcttcatcacaatggtttctcaagtacctggatatacgggtcggtacg
cccagcgtctatgagcacgttgacgtgcagcgaccgctgacaccgcaccagtgtcgcgtc
agcgacctcacctacgctgcgccaatcttcgtcgatattgagcactatcactgcggtcgg
cgcgaaacggtatcgaacttgttcataggttacttaccgatcatgctgcgctcttcgcgt
tgctgcctcctgcaggctcgcagcgacaccgagcttgcggagcgcttccgtgagtgcccg
ctcgaccccggcggctacttcattgtgcgtggcgcagaacgtgtcatcgtcatccaggag
caactctgtaagaatcgcatgttgattgagctcgattcgcgcggcgacctgtgtgcgacg
gtgacgagttccactgcggagcgcaagtcacgcactgcggttgtttaccggggtgagcgt
ctctttctgcggcataacaccttgacggaggatattccgatcgtggtgatcttccgcgcc
atgggcatacggagtgcagcagagcaggttgcgctcatcagttgggatgcatcgctgttg
gagccgtcgctagagcacgccgaaagactcggcgtgcactcggcaagcgatgccctgcgc
tacatagggcagcgcctgcgttcgttgagccgcctgtatgcgtggcgaagtgcggagata
gctaccgagcaacgccaacgacggaaaccgagcctagaagaggaagctcgtgcgctactt
cggaccctcgtgctcccgcacatcccctgtgacggcatcgattttagcgacaagtgtcta
tatctcgcactgatgattcgaggtgtcctggcggccaaggcgaatccagagagcctcgat
gacaaggactattatgggaacaaacggctagagcttgcgggtcccttgttggcgttgctc
ttcgaggacctgttcaagaagctgaatgcggatatccgccggcacgcggatcaggtgctc
gcgaagcccagtcgaacgcaggactttgacgtgacgcgctgtatacgcagcgaaaccatt
agccacggatttgaacacgccctcagctcgggaaactgggcgctgaaacggttccgtatg
gagcggcaaggcgtcacgcaggtgctcagtcgactcagctacgtcgctgtcatcgggatg
atgagcagaatcacctcgcagttcgagaagacgcgcaaaattagcggaccacgggcttta
caacctagccaatggggtatggtctgcccgtgtgatacccccgagggtgaatcctgcggc
ctcgtcaagaatctggcgttgctggccgacgttaccaccgaggaagaggatacggcggtg
cgtcgcctggtgtacgacctgggtacgcaggatatccgagccctcgccgattacgacttg
gcaagtagcgaaagctggcgctccgcgtctggtgacggcctccgacctgccggggcgccc
gatgccgatgaacggccggctttggtgtttgtgaatggtcttctgctgggtatgcacctg
catcccagcgcgctcactgaacagttacgagcgcatcgccagcgcggggccctgggtgct
tttctttccatatgggaaagctcaacgcgggcatggcgagctgtgcacgtcgccacggat
gctggacgcgtttgtcgaccgcttctcgtcgtagatcgtgaacgggggacgctgcgactc
cagcgtcgccacctggaggacctggaactcgggctcttgcgttgggaagacctcctccag
caaggtattgtagaatatctggatccgaatgaagagaacgacgcgctgatcgctctcgat
attgcgcagttacaacaggacgatcgacagcaggaacaagagcagcgtttaacgcaaaaa
acgaatcgttatacgcacttggaaatatcgccagagagcattctaggtgcttgtgcgggt
ctgattccgttcgcaaaccataaccagtcacctcgcaacacctatcagtgtgccatgagc
aaacaggctatcggtgcaatggcctataatcagcatctacgaacggatgcactgctttat
ctgctgaactatccccagcgacccctggtccagacacgagcagtagagtttacgcactat
catcgactacccggtggacagaacgctgtcgtggcagtcatgtcgtacagcggatacgac
atcgaggatgccctggtcgtgaacagggccagtgtggatcgcggcctggggcgttgcacg
gtgctgcgcaagtaccccgtgagcctgcgcgtctacccaaacggcactcgtgacaccatt
gaaccggcaatgacaacgacaacgacgacgacaacaccgaccgtggcctacacaactgcc
accgagggtgccccgggcaccactgcctccatatctgtgacgggggtgcgttcgacgtcc
ggccaggaacccgagctcgccgccgaacgcagacgacgctatctagagcaagcactcgat
agcgacggtatcgttgctccgggtatgccgctgccgccgggggcaatcctggtcaacaag
gtgatgccgaccgagacgctgcaccagccgttgctgcgttccggaccagagtcgcaggca
ggtcattccacagcgctcactgctggtgctgctgctggtgctgctgctgctgctgctgct
ggcactacaggaacccaacgagatgccgctggctctctcgcctctagttggcaacgctcg
cttcgacgaccggcaccggcggtttatcgagcgccgggcggtgccggtgtcgttgatcag
gtgctcgtcacacaggatcagaatgacctgcgcctcatcaaagtcatggtgcggcaaacg
cgtcgagtcgttgagggtgacaagtacgcttctcgtttcggtcaaaagggcgtcgttgga
ctgattccccctgaaaccgacttgccatggcacggcaacagcggcatacgcccagacatt
gtgttcaatccgcacggtatgccgtcgcggatgacagttggcaaggtgttcgagttgatc
gcgggcaaagcggcagctcttgacgggtgtttgcgcgacgcaaccgcttttgtggaacgc
accggactcgatagcaccgaggcttgcgccgaagtgctccttcgttcgggctactcttac
gccggccgcgacctgctgtattccggcatcaccggggagccgctcgctgcgcacgtcttt
tttggaccgatctactatcaacgcctgaaacatatggcagtggataagtgcttcgggcgg
gcacgagggcctcgtgcggtgctcacgcgccagcccacggagggtcgcagtcgcgacggc
ggtctccgactcggtgaaatggaacgcgactcgctgttgggtcacggggcgagtttgtta
gtgctcgagcgtctcatgtacagttcggacgcctttacggcttttgtgtgtgagtcgtgc
gggtatctgggcgccagagactggtgtcaggtttgccgtcgaggggatgcgatgcagcga
gtcctgttaccgtatgcctgcaaacttttgttccaggagttacaagcgatgaacattgta
accaagctgcgacttggagaggctgcttga
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