Cyanidioschyzon merolae: CYME_CMF066C
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Entry
CYME_CMF066C CDS
T00175
Name
(RefSeq) flavin-dependent tRNA:m5U methyltransferase trmFO
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMF066C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMF066C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CYME_CMF066C
Prokaryotic type
CYME_CMF066C
Chromosome and associated proteins [BR:
cme03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CYME_CMF066C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
HI0933_like
DAO
AlaDh_PNT_C
Pyr_redox_3
Pyr_redox
ThiF
Motif
Other DBs
NCBI-GeneID:
16992987
NCBI-ProteinID:
XP_005535733
UniProt:
M1VB41
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All DBs
Position
6:complement(171508..173853)
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AA seq
781 aa
AA seq
DB search
MFLAELSFSRVFHSGATKWCESRSSRQLELQTTRSTNGWLCPSSGRHLFRQHRTGLRASQ
QGVEEGSSSRPSQAPSPLPAPSLPAEHFSNQAQSMRSSRGGPLYPEGEYDVIVIGAGHSG
CEAALASARLGARTLLLTLNLDRIAWQPCNPAVGGPAKSTLVHEVDALGGWIGKIADRTY
LQRRVLNRGKGPAVWALRAQTDKREYSAEMRRVLEEAENLEIREGMVYDLALGPNGEVVG
VETYFGGAFRARAVVLTTGTFLGGTIWVGNKSMPAGRAGEPASFGLTETLQRMGFETGRL
KTGTPPRVDGRTIDYTVMEPQPSDPEDHWFSFDPAEWNPRSDTMPCYLTRTTAETHRIIR
ENLHLTPKYGGFMCSTGPRYCPSIEDKIVRFAEKESHQIFIEPEGRTIPEVYVQGFSTGM
PESIQLAMLQSIPGLERCRMVRPAYSVDYDYLPGWQVYHTLHSKKIEGLFLAGQVLGTTG
YEEAAAQGIIAGVNAAQFAKRGSDADLVMLDREDSFLGVMIDDLCTKELDEPYRVLTSRS
EYRLLLRADNADERMTPLGRSIGLIDDRRWNIFQEKLKRIERQRMRLETTMLRGDSEEAL
LIQQQCDVGKIAANVSLADLLRRPRLSLSVLKQVGVLADSEPNMTVFDWETLETRIKYQG
YIDQQQETVRRIKAEYGRKIPDDIDYYSITQLSRESMDRLSKIRPATLGQATQVGGVKPA
DILILLVWLERERRRAAETASVGKRGITEPDAASATRDAAATDGGERISTIQSMQVGASP
P
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgttcctagccgaacttagtttctcaagagtgtttcattccggggcaaccaagtggtgc
gagtcgcgcagttcacgccaacttgagctgcagacgacgaggagcaccaacgggtggttg
tgtcccagttcagggcgtcatttgttccggcaacatcgcactggcctacgtgcatcgcag
caaggtgtcgaggaaggctcgtcgtcgcggccctcgcaggcgccgtcaccgttaccggca
ccgagcttacctgcggagcacttttcgaatcaggcacaaagtatgcgttcttcgcggggt
ggaccgctctaccccgaaggcgagtacgatgtcatagtcatcggtgctgggcactccggc
tgcgaagcggcacttgcctctgctcgtttaggagcgcgcacgctcctcttgaccctgaat
ctggaccgtatcgcctggcaaccttgtaatccagcggttggcggaccagcaaaatcgacg
ctcgttcatgaagtcgacgctcttggtggatggatcggcaagatcgccgatcgaacgtat
ctgcagcggcgtgtcctgaaccgtggcaagggtccagcggtatgggcgctgcgtgcacaa
acggacaagcgagagtattcagcggagatgcgtcgagttctggaggaagctgaaaacctc
gagattcgtgaaggaatggtctacgatttggctctgggtccaaatggtgaagtcgtgggc
gtggagacgtattttgggggcgcattccgggcacgtgcggtggtcttaacaacggggacg
tttcttggcggcacgatctgggtaggcaacaagtccatgcctgcgggtcgcgcaggcgag
ccggcatcgttcgggctcacagagactttgcagcgaatgggatttgagacaggtcgcttg
aagacgggaacgccgccgcgtgtcgacggccgaaccatcgactatacggttatggaaccg
caaccatccgatcctgaggatcattggttcagcttcgaccccgccgaatggaacccccgg
agcgacacgatgccgtgctatttgacgcgaacgacggcggagacccaccgtattattcgt
gagaacctccatttaactcccaagtatggtggcttcatgtgctcaacagggccgaggtac
tgtccaagcatcgaggataagatcgttcgcttcgcagagaaagaaagccatcagattttc
atcgagccagagggtcgcaccattcccgaagtctacgtgcagggcttctccaccggcatg
ccggaatcgattcagcttgcgatgcttcagtccatacctggccttgagcgatgccgaatg
gtccgacccgcgtactccgttgattacgactaccttccgggatggcaggtgtatcacaca
ctgcacagcaagaagatcgaggggctcttcctcgctgggcaggtgctcgggacgaccggc
tacgaggaggctgcggcgcaggggatcattgctggcgtgaacgccgcgcagtttgccaag
cggggcagtgacgctgacctcgtcatgctggatcgcgaagactcgtttcttggggtgatg
atcgatgatctctgcacaaaagagctcgatgaaccgtatcgcgtgcttacctctcgatct
gaatatcggctgctcctgcgcgcagataatgccgacgaacgaatgacgccgctgggtcga
agtatcggcctcattgacgatcgtcgctggaatatcttccaagagaagctgaaacgcatt
gagcgccaacggatgcggctggaaacgacaatgcttcgcggcgacagcgaagaggcactt
ctcattcagcaacaatgtgatgtcggaaagatcgcagcgaatgtttcgctggcagatctg
cttcgtcggccacggttgagtctcagtgtgctgaagcaagttggtgtgcttgcggattcc
gaacccaacatgacggtcttcgactgggagacactggagactcgcatcaaataccaagga
tatattgaccagcagcaagagactgttcgccgaatcaaggcggaatatggacgaaagatc
cctgatgatattgattactactcgatcacgcagctcagccgcgaaagcatggatcgattg
agcaagattcgcccggcaacgctgggtcaggcgacgcaggtaggtggcgtcaagcccgcc
gatatcctcatccttctggtatggctggagcgcgaacgacgccgagcagcagagacagca
tctgttggcaagagaggcatcacggaaccagatgccgcttccgctacacgagatgccgcg
gcgacggacggcggagaacggatcagcaccattcagtcaatgcaggtgggcgcctcacct
ccctga
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