Cyanidioschyzon merolae: CYME_CMF103C
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Entry
CYME_CMF103C CDS
T00175
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
cme
Cyanidioschyzon merolae
Pathway
cme04142
Lysosome
cme04144
Endocytosis
cme05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CYME_CMF103C
04142 Lysosome
CYME_CMF103C
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
CYME_CMF103C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CMF103C
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cme04147
]
CYME_CMF103C
Membrane trafficking [BR:
cme04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
CYME_CMF103C
Exosome [BR:
cme04147
]
Exosomal proteins
Proteins found in most exosomes
CYME_CMF103C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
TPR_20
TPR_Vps41
DBB
Motif
Other DBs
NCBI-GeneID:
16993032
NCBI-ProteinID:
XP_005535763
UniProt:
M1VB59
LinkDB
All DBs
Position
6:281829..287009
Genome browser
AA seq
1726 aa
AA seq
DB search
MAAAPVVFEELFTLPSVGISPTHISFSNVTMESDRVICVRETSDQGNKLAIIDVTKPDQI
VRRPITADSAIMNPESRIIALRAGAQIQLFDITSKTRIKSYLLSEGDIVFWKWLSGRTLG
IVTANAVYSWSIDASSTAPPAKVFDRHPALAACQVINLVAGVGERWLALVGIRADDTAPG
GVLGKIQLYAVDRGVSQILDGYAAGFCDRYRIDSQDVTGTHLFAFASKTKFHVVEVAQDR
KPDGAPRFEKRITNIVYAPGMDNDFPVALQVSSKLSVAYLLTKYGYIHAFDLESGKLIYA
NRISESPVFVSTSHRETGGLIGINRRGQVLVFAIDPSLVVEYILRETNDLDLAIKFAARN
ALPGADDLFAQQFRLLFDSGKYREAAQVVAESPAGNLRTPQTMEMFKAATPQPNVPSPLL
LYLQVLLEHGNLNNVESIELGRQVVAYSRLGLLERWIKENRIECSEELGDLVRAANDHRL
ALAIYLKAGAHRKVFDGLIQLGEYKRAAEYAKRNGIPVDALSLIQSALATSPKVALEVAE
SLATDTADHAAVADLFLQRGMVQEATSYLLDVMREDRPEQGDLQTKVLEINLTLGAPQVA
DAILAQEMYTHFDKQRIAVLCERAGLAQRALQLYTRLSDVKRILVTLSHAIQPEYFLSIF
ANLSPDDSLELLDELLTNDLRGNIQRVVQVAIRYSDALGPSRLIDLFEKHQCYEGMYLYL
GAILATSKSPYVVAKYIEAACRTQQWSEAERVTRESDLYNPEQVKELLFELRPKDPRPII
NVCEKGGDVEDMVRYFVKQNQLEIVKGYVQRINPGNTPAVVAALLDSDSSSVDDVYIKSL
LMSIKSLVPIEAVTQVLEERQKLKLMLQLLEALVAEGSKDRAVHTALAKVYVDANINPEH
FLETNEFYDARIVGNFCERRDPLLAFIAYAHGACDDDVLRVTSDHGLWREQARYVIERMN
PELWARVLEESNPNRKTLLTQVIGSALMENRNPEQVSAAVKALMRAGLQNELLELLEKLV
LQAGGTFANNTSLQNLLLLTSIRSAPERTGDYIRRLDAFDGATIGQLCLEHDLYDEAFAT
FAKFEMHVEAVSVLIDQKKDIVMANEYAAQHDRADIWARLGDGLLRLGELTKAVQVYMRA
GVTNRYRPLIQACRKTGAFADLATYLQFVRSKQLGIDEELIDSELVYALACCDPPKLSQL
EELLASPQSADLDAVGDRLFSEGKYEAARLLFVAANNYARLAECLVYMREFTAALEAARK
ANKLRTWKTVCYACVEAQEFRIAELCALHLIVVPEELDEVIRVYETRGYFDQIMSVLENG
LGLDKAHNGMFTELAVLYSKYAEQKVMEHLLVYWSRCNLAKVIRALESAHLWNELCFAHM
RYEEYDAAAMIMMEHAPLAWSHKGLEECLAAVTGAEVLYRAVSFYMDEHPDLLIELLGVL
QSRLDPGRVLSMARQHGLDKFGPLGHVPLLKPYMLRVQDKNLAEVNEALNEVLIMEEDVD
ALVLSVERYPNFDQMALAQRLEKHELPLMRQVAVLLLRRSQKYERALELCKRDMAFREAA
EIAAESGSASLAESIARYFLESNLKEAFTMALYLCYPLLRPDLVLEWTWRFGASDYAMPF
YIQTLHDYGKRLEALERAERDHRTTNRKERTNAASGSESLLRSLTASTPMLMAGTPPTGP
TPPSSLYFGASGPVPSMRMPSPAASAPAAAGMAGNSARGRNPYFGT
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcacctgttgttttcgaggagctgttcacgctgccctcggtgggcatcagc
ccgacgcatatcagcttcagcaacgtcaccatggagtcagaccgtgtcatctgcgttcgg
gagacctctgaccagggaaataagctggcgattatagatgttacaaagcccgaccagatc
gtgcggcgaccgataaccgcggactcggcaataatgaaccccgagagccgcatcattgcc
ctgagagcaggtgcgcagatccagttattcgacatcacatctaagacgcgtatcaagtca
tacctgttgtcagagggcgatattgtgttttggaaatggctctctgggcgcaccttgggg
atcgttactgcgaacgcggtgtacagctggtcgattgacgcttcgagcaccgcgccgcct
gcaaaagtattcgatcgacacccagcgctggccgcctgccaagttattaacttagttgct
ggtgtaggtgaacgctggttagctctggttgggatccgcgccgacgacaccgctcccggt
ggtgtgctgggcaagatccagctgtatgctgtggatcgcggtgtgagtcagattctcgat
ggctatgcagcaggcttctgtgatcgctaccggattgattctcaggatgttacgggtacg
catctgttcgcgttcgcgagcaagaccaaattccacgtggtggaggtcgctcaggatagg
aagccagatggtgctccgcgcttcgagaaacgcatcacgaatatcgtatacgcacctggc
atggataacgattttcccgtggcattgcaggtatcgagcaaactgtcggtggcgtatctg
ctgaccaagtacggctacatccatgcgtttgatttggaatcgggcaagttgatctacgcg
aatcgcattagtgaatctcctgtttttgttagcacatcacacagagagacaggcggatta
ataggaatcaaccgacgggggcaggttcttgtttttgcaatcgacccatctctggtcgtt
gagtacatcctgagggagacaaacgacctggatctggccatcaagttcgcggcacggaat
gcgctgcccggtgcagatgatcttttcgcgcaacaatttcgcctcctctttgattcggga
aaataccgtgaggcggctcaggtcgttgcggaatcgcctgctgggaatctgcgcacgcct
caaaccatggagatgttcaaggcggcgacaccacaaccgaatgtaccatcgcctctcctt
ttgtacttgcaggtgctcttggagcacggcaacctcaacaatgttgaatcgatcgaactt
ggtcggcaggtcgtcgcatattcccggctgggtttgcttgagcgatggatcaaggagaac
cgaatcgaatgctctgaggagcttggcgatctagtaagagctgccaacgatcatcgcttg
gctctggcgatttacctgaaagccggtgcgcatcgcaaggtgtttgatggtctcattcaa
ctcggcgaatacaagcgagccgcggaatacgcgaaacggaatggtattccagtggacgcg
ctttccctgatccagagcgctttggcaaccagcccaaaggtcgcgctcgaggtcgcggag
tcgctggcaacagataccgcagaccacgcggcggtagcggacctgtttctgcaacgcggg
atggtgcaggaagcgacctcatatcttttggatgttatgcgcgaggatcgcccggagcaa
ggtgacttgcagaccaaagtccttgagatcaacttgaccttgggtgctccgcaggtagct
gatgcgatacttgctcaggagatgtatacacattttgataagcagcggattgctgtgctt
tgcgagcgggcgggacttgctcagcgcgctttgcagctgtacactcgtcttagcgatgtc
aaaaggatactggttacattgtcgcatgcaattcaaccggagtactttctctcaattttc
gcgaatctttctcccgacgacagcctcgagctgctcgatgaactattgaccaacgacttg
cgcggcaacatacagcgggtggtgcaggttgccatccgctactcagatgctctgggacca
tcacgtctgattgacctcttcgagaagcaccagtgctatgaaggaatgtatctgtacctc
ggggcaattttggcaaccagcaagtcgccctatgtcgttgccaaatacatcgaagcagcc
tgtcgaacgcagcagtggtctgaggcggagcgcgtcacccgcgaatcggatctgtacaat
cccgagcaagtgaaggaattgctctttgaattgagacccaaagaccctcgtccgatcatc
aatgtgtgcgaaaaaggcggtgatgtcgaagacatggttcggtactttgtgaagcagaat
cagcttgaaatcgtgaaaggctatgttcagcgaatcaaccccggcaatacgccagccgtc
gtggctgcgctactcgactctgacagctcttcggttgacgacgtctatatcaagtcgctg
ctgatgagcatcaaatcactggtgcctatcgaggccgtcacgcaggtgctcgaagaacgt
cagaagctgaaactgatgctgcagttgctggaagcactggttgccgagggcagcaaagac
agagcggttcataccgcgttggccaaggtctacgtcgacgccaacatcaacccggagcat
ttcctcgagacgaacgagttttatgatgctcgaattgtgggcaacttttgtgaacggcgt
gatccgcttctcgcgttcattgcgtacgcgcacggtgcatgtgatgacgatgtgctgcgc
gtaacaagcgatcacggcctctggcgggagcaggcacgctacgttatcgagcggatgaac
ccggaactctgggcacgcgtcctcgaggagagcaaccccaatcggaagaccctgctcacg
caggtaatcgggtctgccctgatggagaatcgtaatccggagcaagtcagtgccgcagtg
aaagcactcatgcgagctggattacagaacgagcttctagaacttttggagaagctggtt
ttgcaggcgggcggaacttttgcgaacaatacatctctccaaaacctgctgctgttgacg
tcaattcgatcagcacccgagcgcaccggtgactatattcgccgcctggacgcgtttgac
ggcgcaacaatcggccagctgtgcttggagcacgacctctacgatgaggcatttgcgact
ttcgccaagttcgaaatgcacgtcgaggctgtgagcgttctcattgaccaaaagaaggac
attgtcatggcgaacgagtacgcagcacagcacgaccgtgcggatatctgggcacggctc
ggcgacggcttgcttcgtctgggagagcttaccaaggccgttcaagtgtacatgcgcgct
ggtgtgaccaatcgctaccggccactgatccaggcgtgtcgcaagaccggcgcctttgct
gacctcgccacatacctccagtttgtgcgcagcaagcagctcggcattgacgaggaactc
atcgacagcgaactggtgtacgcgcttgcctgctgtgatcctccaaagttgtcacagttg
gaggagcttctcgcttcgccgcagtcagcggatttagacgctgtcggggaccgtctcttc
agtgaaggtaagtacgaagccgcccgtttgttgtttgtcgctgccaacaactacgcacgt
ttggccgagtgcctggtatacatgcgggaatttacggcagcactggaggcggcacgcaaa
gcgaacaaactgcgtacctggaagactgtttgctatgcgtgtgtggaggcacaggagttt
cgcattgcagagctgtgcgcgttgcatctgattgtggtccccgaggagctcgacgaggtc
attcgggtctacgagacgcgtggctatttcgatcagattatgagtgtactggagaacggt
ctcggactggacaaagcgcacaatggcatgtttaccgagctcgcggtgctctatagcaag
tacgcagagcaaaaggtcatggagcacctcctcgtttactggtcgcgctgtaatctggcc
aaagtcatccgggctctggagagtgcacacctgtggaatgagctttgctttgcccacatg
cggtacgaggaatacgacgctgctgcaatgattatgatggaacatgcaccacttgcttgg
tcgcacaagggcctcgaagagtgtcttgccgccgtcactggcgccgaagtcctctatcgc
gcagtctcattctacatggacgagcaccctgatttgctcattgagctcttgggcgtgctg
caatcgcgcctggacccgggccgcgtgctctccatggctcgtcagcacggcctcgacaag
ttcggtcctctaggccacgttcccttgttgaagccgtacatgctgcgcgtacaggataag
aatttggccgaagttaatgaagcgttgaacgaagtcctcatcatggaagaagacgtggac
gccctggttctctccgtggagcgctacccgaactttgaccaaatggcactggctcagcgt
ctggagaaacacgagctcccgctcatgcgtcaagtcgctgtgctgctgctccgccgcagc
cagaaatacgaacgagcacttgagctctgcaaacgagatatggcattccgggaggctgct
gagatcgccgcagaatcaggctctgcgagcctcgctgaatccatagcgcgctacttttta
gagagcaatctgaaggaggcctttaccatggccctgtacttgtgttatccgctgctgcgc
cccgatcttgttctggagtggacctggcgctttggtgcttcggactatgcgatgccgttc
tacatccaaaccctgcatgattacgggaaacgcttggaagcactggaacgtgcagagcgc
gatcatcgaaccacgaatcgcaaggagcgcacgaacgctgccagcggctcggagtcgttg
ctgcgcagtctgacggcatcgacaccgatgcttatggcgggcacgccaccaactggaccg
acgccgccctcgagtctctactttggcgctagtggaccggtgccgtcgatgcgcatgcca
tctcctgcggcgtctgcaccagcagcagcgggtatggcagggaatagcgcacgcggccgc
aatccgtatttcggaacgtaa
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