Cyanidioschyzon merolae: CYME_CMF108C
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Entry
CYME_CMF108C CDS
T00175
Name
(RefSeq) similar to cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CYME_CMF108C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMF108C
Messenger RNA biogenesis [BR:
cme03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CYME_CMF108C
U7-dependent histone pre-mRNA processing factors
CYME_CMF108C
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
MSP1_C
Dimerisation
partial_CstF
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
16993027
NCBI-ProteinID:
XP_005535767
UniProt:
M1UPU3
LinkDB
All DBs
Position
6:complement(299119..300021)
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AA seq
300 aa
AA seq
DB search
MSRGSCTVFIGNIPYGVTEDMLLERLQQVGPVVSLRILYDKETGKPKGYGFCEYRDPETA
ESAVRNLNERIEFGGRMLRIAPSSQTRNQASAGGSTAPGAGAAPEGGRSGPGLGPGASAA
SWGAYDALADATAPSQPTGPTVTAAQVVQPFLLPSGQPSLQGLSLQQIFDVLAELKTIAQ
QNPNEVRAMLAAHPPIAHAILQAQVLLGLLSAQQAQQYLQSMTASVTTNASLAAMQRVQS
GAAAGAAAPLPGGIVPGQGAATEEALIQQLMSLTPAQIQALPPDQRQQVLAFRMQMAARR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcggttcctgcactgtgtttatcggaaacataccctatggagtcacggaggat
atgctgctagaacgcttgcagcaagtaggtccggtggtgagtctacgcatcctttacgac
aaagagaccggcaaaccgaagggctacggtttctgtgagtaccgcgaccctgagacagct
gagagtgctgtacggaacctcaatgagcgcatagagttcggaggacgaatgctgcggatc
gccccgagttcgcagactcggaatcaggcaagtgctggcgggtccactgcaccgggggca
ggagcagcgcccgagggcggacgatcgggccctgggctgggtcctggagcttcagcagca
tcctggggcgcttacgacgctcttgcggacgctaccgcaccgtcacagccgactggaccg
acagtgacggctgcacaggtagttcaaccgtttttgctcccaagcggacagccatctctg
cagggtctcagtctccagcagatcttcgatgtgctcgctgaactgaagacgatcgcccag
cagaatcccaatgaagtacgcgcgatgttggctgcgcatccaccgatagcgcatgcgatt
ctccaagcccaggttttactgggcctgctcagcgctcaacaggcacagcaatatctgcag
agtatgacggcatcggtgactacgaatgcgagcctggcggcgatgcagagggtgcagtct
ggtgctgcagccggcgctgctgcaccgctgcctggaggcatcgttccgggtcaaggcgct
gcgactgaagaggctctgattcaacagttaatgtcgctgaccccagcgcagattcaagcg
ctgcctccggatcaacggcaacaggtgcttgcgttccggatgcaaatggctgcccggcgc
tag
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integrated database retrieval system
