Cyanidioschyzon merolae: CYME_CMF157C
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Entry
CYME_CMF157C CDS
T00175
Name
(RefSeq) probable U3 snoRNP component Utp7p
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMF157C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CYME_CMF157C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
16992981
NCBI-ProteinID:
XP_005535800
UniProt:
M1V760
LinkDB
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Position
6:complement(435336..437273)
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AA seq
645 aa
AA seq
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MVEERVTTLEATPGYKRYQRLPPAATALLSDHTMVRVSQRSLRHKIEQVVHQSREAAERS
AELDLLLDREGRRGFIEPESELERHTSHVSQQALQEASSLYAQRGRFRLDFEDYSRTRAS
QVLRKQERAASSNGVEHPTMGYRARYSASSRVLLLGGLHNGHVVVLDWRRKRTMAPELHL
GEHLRDVVMLHTDGLFAAAVERAVAIHDAVSGAQIHCLRQHSRPHSLDFLRYHLLLLSMS
ETGELHYTDVSNGMTVAQFPTHLGRPSAALTTSPYHGVAFTGHANGTVQLWSPAMPNEPL
AKVLAHPGYGGVAAVATDHGGRYLVTAGAASRHFAVWDMRKLFRPIHSYESKSGGLITSM
DVSQTGLLAIGHSAGGRVIIWKDWALYEAKAYEPYLQTRVGVGAGGTRISAVAFAPFEDV
LGVGYSTGFESCLVPGSGEPEFDALEPNPYWQKAQRRAAQVQLLLEKLPPETIALDPNFI
GRVERDHRRVQRTGRRVSQLRYRPPAETAPNEAAPREDQSSAPEDAQTDENGGLSASVPP
WRRRVKHPSLRKSRGRNALANRLRRRQQNVIDTKAEALRTRLVQMLQHRRRRRQRGHPRV
HDHETGQRSSKDATQATLRSERHTNRAHLAKLMPRALQSFHQHQR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggaacgcgtgacgacgctcgaggcgacacccggttacaagcggtaccagcga
ctgcccccggccgccactgcactgctgagcgatcacacgatggtgcgggtctcgcagcgt
tcccttcggcataagatcgaacaagtggtgcaccagtctcgagaggcagccgaacggtct
gctgaacttgacttgctgctcgatcgggaaggccggcgtggtttcatcgagcccgagtct
gaactcgaacgccatacgagccacgtttctcagcaagcgctacaggaagcaagcagcctc
tatgcacaacgagggcgttttcgcctcgactttgaggactactcgcgaactcgcgcctcg
caggtactccgcaagcaagaacgagccgctagctcgaacggtgtcgaacatcccaccatg
ggctaccgagctcgttattctgcaagctcgcgtgtcttgctgctgggaggactccacaac
ggccatgtcgtcgttctggactggcgccgcaagcgcaccatggcaccagaattgcacctt
ggagaacacctccgcgatgttgtgatgttgcatacagacgggttgtttgcagcggccgtg
gaacgtgctgtcgctatccacgacgccgtcagtggtgcccagatccactgcctgcgtcaa
cactcgcgcccacatagtctcgattttctgcgatatcatcttttgttattgagtatgagc
gagacgggcgaactccactacaccgacgtctcgaatggaatgacggtggcccagttcccg
acgcatctgggcagaccgagcgctgcgctcacgacgagcccctaccatggcgtcgcgttc
accggacatgccaacggaacggtgcagctgtggtctccggctatgccaaacgagccgttg
gcaaaggttcttgcgcatccgggttacggtggcgttgctgccgtcgccaccgatcacggc
ggtcgttacctggtaaccgccggggcagcgagtcgacactttgccgtatgggacatgcgg
aaactgttccgaccgattcattcctacgaatcgaaaagcggtggtttgattacctcaatg
gacgtcagtcaaactgggctcttggcgatcgggcacagcgctggaggtcgagtgatcatc
tggaaggactgggcactgtacgaggccaaggcgtacgagccctacctgcagacacgggtc
ggtgttggagccggcgggacgcggatcagcgctgttgcttttgcgcctttcgaagatgtg
ctcggtgttggctactctactgggttcgagtcgtgcctcgtccctggatccggagagccc
gagtttgatgcgcttgagcctaacccctactggcagaaagcacagcgccgcgcagcgcaa
gtgcagctgctgctggagaagctcccaccagaaaccatcgcgctcgacccgaactttatt
ggacgggtagaacgagatcaccgcagagtccagcgcacaggaaggcgagtctcgcagctt
cgctaccgaccaccagcagaaactgcacccaacgaggcagcacctcgagaagaccagagc
tcggcacccgaggatgcacagaccgatgagaacgggggtttgtcggcttcggtaccgccg
tggcggcgtcgggtgaagcacccctcactccgaaagagccgtgggaggaatgctctcgcc
aatcgactacgaaggcgtcaacaaaatgtgatcgacacgaaggccgaagcgctccgaacc
cgtctagtgcaaatgcttcagcatcgtcgtcgtcgtcgtcaacgaggccatcctcgtgtt
catgatcatgaaactgggcagcgctcatccaaggatgccactcaagcgacactgcgcagc
gagaggcacacaaaccgcgcacatctcgcaaagttgatgccgcgggcgttgcaaagcttt
caccaacaccaacggtag
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