Cyanidioschyzon merolae: CYME_CMF170C
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Entry
CYME_CMF170C CDS
T00175
Name
(RefSeq) vesicle coat complex COPII, subunit Sec23
KO
K14006
protein transport protein SEC23
Organism
cme
Cyanidioschyzon merolae
Pathway
cme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CYME_CMF170C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CMF170C
Membrane trafficking [BR:
cme04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CYME_CMF170C
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
16992969
NCBI-ProteinID:
XP_005535810
UniProt:
M1V763
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Position
6:complement(477450..479777)
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AA seq
775 aa
AA seq
DB search
MSIDFAQLEEVDGTRWTWLFWPTTKAAASQCVLPFACLFTPLRPLPNMPPPLPYPPVTSR
EGTVLNPYCSVDINARMWVCPFTFQRNQLPPQYASIPDNQLPSELIPEYTVVEYRLNRPP
APPPAFLFVLDTTVPEKQFTVVKEYLLKALSLLPPGTTVGLITYGQHLQVHEIGFTEGFR
SYILRGNKSYDAASLQPLLGLGGASAAAGAGASAAAKQRADATAAGAHSKLAPPDRFLQP
IQECEYMMATLLEGLQRDAWPVPADERPKRCTGAALAAAAALLECTYRGYGAHICLLQGG
PCTEGPGTIVGPKLDEELRSHIDIEKDNAPHLKKALKHYDEVATRLVNAGHALSVFGCSL
DQVGFYEMKACVDRTGGVFVMAESFEHDMFKRSFEKFFECDENGHLKRHFLATLEVDCSR
EFKIAGVIGPSASLEKKGPSVSTDTEIGIGGTCAWRIGSISPDTSLSVFFDVVNQQSNGI
PENHYRYIQFRTTYQHSSGEFRMRVATHAGRWCDGNDLVTLAAGFDQEAAAVTMARLAAF
RTENEEAFDILRWLDRLLIRLCARFGDYQKERPETFRLGPSMSFYPQFMYHLRRSALLQT
FNTSPDESAFFRSHLCRVSTADGMLMIQPSLIQYSLESAPTPVLLDVASVRPDVVLFLDA
FFYIVIFYGDTVAQWRKAGYHLQPNYRNLAELLEIPRRDAAACIAARFPYPRWVESDQYG
SQARFLLAKLNPSATHTSGNVDVLSGSAAAEFIYTDDVSMEIFLEHLRRATVATT
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctatagacttcgcgcaactggaggaagtggacggcacgcgctggacgtggctgttc
tggccaacgaccaaggccgcagctagccagtgcgtgcttccgtttgcgtgtctttttaca
ccgttgcgaccgttaccaaacatgccccctccgctgccgtacccgccggtgacgtcgcgg
gagggtacggtgctcaacccgtactgtagcgtggacatcaacgcgcggatgtgggtttgt
ccgtttacgtttcagcgcaaccagctccctccacagtatgcgagcatcccggataaccag
ctgccatctgagctcattccggaatacacagttgtagagtatcgtttgaataggccaccg
gccccaccgccggcatttctctttgtactggacacgacagtgcccgagaaacagttcacg
gtggtgaaggagtacctcctcaaggcgctttcgctgctaccgccaggaacaacagtgggc
ctgattacgtacgggcagcacctgcaggttcatgagattgggttcactgaaggctttcga
tcgtacatccttcgagggaacaaatcctatgatgcagcgtcactgcagccgttgcttgga
ctgggcggcgcctctgcagctgctggcgctggagctagcgctgccgccaaacagcgtgct
gatgcgacagcagcgggcgctcattcaaaactggcacctccagaccgctttctccaaccc
atacaagaatgcgagtatatgatggcaacgcttctggagggccttcagcgtgacgcctgg
ccagtgccggccgacgaacggccaaagcgctgtacgggtgccgcactcgcagcggctgcg
gctctcctggaatgcacctacaggggctacggagcacatatttgcctgttgcaaggcggg
ccttgcaccgagggtcccggcaccatcgttggtccaaagctagatgaagagctgcgctct
catatcgatattgagaaagacaatgcaccgcatttgaaaaaggcgctcaagcactacgat
gaggtagccacgcgcctggtgaacgccgggcacgcgctctccgtattcggatgttccctg
gatcaggtcggtttctatgagatgaaagcgtgcgtggatcgcaccggaggcgttttcgta
atggctgaatcctttgagcacgacatgttcaagcgttcgttcgagaagttctttgaatgc
gatgaaaatggacatcttaagcgccatttcttggcaacactcgaggtcgactgctctcgg
gagttcaagattgccggcgtgatcggaccctcggcttccctggagaagaaaggacccagc
gtctccacggacacggaaattggtattgggggtacctgtgcatggcgaattgggagcatc
tcgccggacacgagcctcagcgttttcttcgacgttgtgaaccagcagtcgaatgggatt
cccgagaatcactatcggtacatacagtttcgaacaacttaccaacacagctcgggcgag
ttccgaatgcgggtagcgacgcatgctgggcgctggtgcgacggcaacgacctcgtgacc
ctcgcagcgggtttcgatcaagaggcagccgccgtcaccatggcgcgtctcgctgctttc
cgtacggaaaacgaagaggccttcgatatcctccgatggctggatcggcttttgattcga
ttatgtgcgcgctttggcgactaccaaaaggaacggcccgagacgttccgacttggcccc
agcatgtcattctatcctcagttcatgtatcatttgcgacggagcgcgttactgcaaacg
ttcaatacctcacccgatgagtctgcgttctttcgttcgcatttgtgtcgggtgagtacc
gcggatggtatgctcatgattcaacccagcctgattcagtactcgttggagagcgcgcct
acaccggtgctgctcgatgtggccagcgttcggcccgacgttgtcctctttctcgatgcc
ttcttctacatcgttatcttttatggtgacaccgttgcccagtggcgcaaagcaggctat
catttgcagccaaattatcgaaacttggcggagctgctggaaataccgcggcgagatgcg
gcagcgtgcattgcagcgcgtttcccgtatccgcgctgggtagagtcggaccagtacgga
tcccaagcgcgttttctgctcgcgaaactgaaccccagtgctacccacacaagcggtaat
gtcgatgtacttagcggcagtgccgctgccgagttcatctataccgatgatgtttccatg
gaaatattccttgagcatctacgccgcgccactgtagcgacgacttga
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