Cyanidioschyzon merolae: CYME_CMG048C
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Entry
CYME_CMG048C CDS
T00175
Name
(RefSeq) coatomer protein complex, subunit beta
KO
K17301
coatomer subunit beta
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CMG048C
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cme04147
]
CYME_CMG048C
Membrane trafficking [BR:
cme04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CYME_CMG048C
Exosome [BR:
cme04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
CYME_CMG048C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
AP4E_app_platf
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
16993294
NCBI-ProteinID:
XP_005535861
UniProt:
M1V4P4
LinkDB
All DBs
Position
7:complement(135568..139143)
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AA seq
1191 aa
AA seq
DB search
MTTALEKQCTLLISYEKGVPILLRSSLGERRLGGSAMESTLEGPTASDANVAEAGALPGV
PVALTKLPARSTAAALSRESLSRIGGIQGSALAKVERFVGNVLSAAAEAAAAATAAASNG
YESGDGSEDGATGEDGLVESVLGLGLSRIRKLAAQGAAWTVNDLRQGLESTDVADKVITL
RVLILMQLNGEIPATQQGSLLMAVIRYVLPNEDNQLRKLCFIYLEIVDKTGRDGKMLPEM
ILVCNLLRNELIHPNEYSRGCALRLCCKLNEAELLEPLVPAIRQNLEHRHAYVRRNALLA
IGAIQRRFPQLIPDAAEHIVQYLENENDQNCRRNAFLVLIQADQRQAAKYLLQHAEQLPS
WSEPMQLAALELVRRFRTDELAERGTFVKLIFALLQSSNASVAFEAAQVLVRLSAAPTAV
RAAVSTYCNLLVTQSDNNVKLILLDRITDLRQHFAPIIQEQLTELLRALSAPDLHVRQRV
LDLVMDMIGPRNVEEVASALRKELHRLADNISAEDSASDAALNYRRMLIRAIHQSVIHYP
EIAAKILGTLTDFMGDAVGLAGLDVVSFLRELGERYVEMREPVLRHLLVALPLIRAVRVF
RGVLWTLCEFCAKPSEAMEAFAAISQQIGHLPLTGSGSDKALAPTELEHEDSQMAVPPIE
LADRAWSATPTSASASMSSTAISSKKVTNTSSRPRVLPDGTYATETADAFQGSELSLGDS
SYVTLRDADALSTPALRRMLLQGDHFLWVSVMTALTKLALRLSQVRSEAADLHCTPAVCR
RAMAYALLLGASLLRLGRDRLHAETVTRLDEDTAQRIQSCLQVLLQAMQGSLDALTYHVW
LESSHLAFCEMLKRHRASEDAKAKARALDEQLPVEALVDFRLLQARRASSMAMNRGQRAQ
FATSIGALGRSGTPAAVVPATDPNVDDIELAACGDQRRRAALRDLHLRHLHALSGLSDPV
YVEAQITMHQFDILLDLWLLNQTEHLLQNVCVELFTLGDLRLCERPSPLVLGPHESKQIR
VALKVSSTDTGVIFGNLVFDYGRSAANSGVEDGSGCVIALHEIHLDVIEYLQPSEINEAL
FCSMWEEFEWENKVTIRSRLGSLDAVLALVSETLHMRCQSPRHANNKSGFLAANLYATSV
FGEHVLANLSAERLADGTIQGTVRIRSKTQGLALSLGERLGQTASLVDAMV
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgctttggagaagcaatgcacactcttgatcagttatgagaagggtgtaccg
attctgttgcgctcaagcttgggcgagcggcgtctcggtggcagcgctatggagagcacg
ctggaaggtccgaccgcgtctgatgcgaacgttgctgaagcgggtgccctgcctggggta
ccagtagcgcttaccaaacttcctgctcgatccacagctgctgccttatcccgcgagtcc
ctcagcagaataggaggcatccaaggcagcgcgttagccaaggtggaacgcttcgtcgga
aacgtgctctcggcagctgccgaggcggcggcagcggcaactgctgcagcaagcaacggc
tatgagtctggtgacggttccgaggacggagccactggggaggatggtctggtggagtct
gtattggggctcgggctgtcgcgaatccggaagctcgctgcccaaggtgccgcttggacg
gtgaacgatctgcgtcaggggctggagtccaccgacgtcgcagataaggtcataacgcta
cgcgtactcattctcatgcagctgaacggtgaaatccctgcgacgcagcaaggctcgctt
ctcatggcggtcattcgatatgtcttaccgaacgaggataatcagcttcgaaagttgtgt
ttcatttatctcgagatcgttgataagactggtcgtgacggcaagatgctgccagagatg
atcttggtctgcaatttactgcgaaacgagcttattcatccgaatgagtactcgcggggt
tgcgcgctacgtctttgttgtaagctgaatgaggcggagttactggagccactcgtgccg
gctattcggcaaaacctcgaacaccgtcacgcttacgttcgccgtaacgcactgctggca
atcggtgcgatacagcgacgtttcccgcagctcatacctgacgcagctgagcacatcgta
caatatctggaaaacgaaaacgatcagaattgccgaaggaacgcgttcctggtattgatt
caggcggatcaacgtcaggctgcaaaataccttctccagcatgctgagcagctgccttca
tggagtgaacctatgcagcttgccgctctagaacttgtgcgccgctttcgaacagatgaa
ctggcggagagaggcacgttcgtgaagctcattttcgcattgctacagtcatcgaatgca
tctgtagctttcgaggcagcgcaggtgctggtccgattgagtgcagcgcctacagctgtt
cgtgctgccgtatcgacgtactgtaacttgcttgtgacgcagagcgacaataacgtcaag
ctcatcttgcttgatcgtataacagacctgaggcaacacttcgccccgatcattcaggaa
cagctcacagaactgttgcgagcgctctcagccccggacctgcatgtgcggcagcgtgtg
cttgatcttgtcatggacatgatcgggcctcgaaatgtagaggaagtggcctctgctttg
cgcaaggagctgcatcgactggcggacaatatctccgcggaggattctgcctccgatgca
gcgctgaactatcggcggatgctcattcgagccatccatcagtccgtaattcattatccg
gaaattgccgcgaagatcctgggcacacttacggattttatgggagacgcagttggcctc
gctggactcgatgtagtctcgtttctgcgagagctcggtgagcgctatgtggaaatgcgc
gaacccgtgctgcggcatttgctggttgcactacctctgattcgcgctgtccgcgttttt
cgtggagtactttggacactttgtgagttttgtgcgaagccgagcgaagccatggaggcg
tttgcggctatttcgcagcagatcggtcatctgccgttgacaggttcgggcagcgacaag
gcgctggctcccactgaacttgagcatgaggactcgcaaatggcggtgcctcccatagaa
ttggcggatagggcatggtcagccacgcccacgagcgcgtcggcgtcgatgagcagcaca
gcaatcagctccaaaaaggtgacgaatacgtcgtcgcggccgcgcgtgctccccgatgga
acgtacgcaaccgagactgcggacgcgtttcaaggcagcgagctaagtctcggcgacagt
agctatgtaacgctccgtgatgcggatgcgctctcgacgcctgcactacgtcgcatgttg
ttgcagggtgatcacttcctttgggtttctgttatgacagcgctgacgaaactcgccctg
cgcctcagtcaggtgaggtcggaagccgccgatctgcattgcaccccggcggtctgccgc
cgcgcgatggcttatgcgctgttgttgggcgcgtcgctgctgcgtctcgggcgggatcgg
ctgcacgcggagaccgtcacccgtctcgacgaggacacagcacagcggatccaatcatgc
ctccaggtgctacttcaggccatgcaaggcagcctcgatgcactcacgtaccacgtttgg
ttggagagctctcatctggcattttgtgaaatgctgaaacgccaccgcgcctccgaggat
gctaaagccaaagcgcgcgccctcgatgagcagctccccgtggaggcgctcgttgatttc
cgactgctccaagcgcgacgtgctagcagtatggcgatgaaccgaggccaacgagcgcaa
tttgctacgagtatcggtgcgcttggccgttctggtacaccggccgctgtcgttcccgct
acagacccgaacgtggacgacatcgaactcgcggcgtgcggtgaccagagacgtcgcgcc
gcgctgcgcgacctgcatctgcgccacctgcatgcgctgtcggggctcagcgatcccgtc
tacgtggaagcacagatcaccatgcaccagttcgacatcctcctagacctgtggttgctg
aaccaaacggagcacctgttgcagaacgtatgcgtcgagttatttacgctgggcgatttg
cgactgtgcgagcgaccgagtccgctggtcctggggccacacgagtccaaacaaatacgt
gtggcactaaaagtgtcgtcgacggatacgggagtgatattcggcaatctcgtattcgac
tatggacgttcagcggcaaacagcggcgttgaagacggttccggttgtgtgatagcgctg
cacgaaatccatctcgatgtcatcgagtacctgcaaccaagcgaaatcaacgaggctcta
ttttgcagtatgtgggaagagtttgaatgggagaataaggtgacgatccgttcccggctg
ggtagcctcgacgcagtacttgcgctcgtttccgagacgttgcacatgcgttgtcagagc
ccgcgccatgcgaacaacaagagcggttttttggccgcaaacctgtacgcaacgagtgtc
tttggcgagcatgtgctggcgaatctcagcgcagagcgccttgcagatggcacgatccag
ggcacggttcggatccggagcaagacccaggggcttgccttgtcgcttggtgagcgactt
ggccaaaccgcgtcgcttgttgacgccatggtctaa
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