Cyanidioschyzon merolae: CYME_CMG056C
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Entry
CYME_CMG056C CDS
T00175
Name
(RefSeq) DNA topoisomerase III alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03440
Homologous recombination
cme03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CYME_CMG056C
03460 Fanconi anemia pathway
CYME_CMG056C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cme03032
]
CYME_CMG056C
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMG056C
Enzymes [BR:
cme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CYME_CMG056C
DNA replication proteins [BR:
cme03032
]
Eukaryotic type
DNA Topoisomerases
CYME_CMG056C
DNA repair and recombination proteins [BR:
cme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
CYME_CMG056C
FA (Fanconi anemia) pathway
CYME_CMG056C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
PI3K_p85B
Motif
Other DBs
NCBI-GeneID:
16993287
NCBI-ProteinID:
XP_005535867
UniProt:
M1UQ11
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All DBs
Position
7:160803..163157
Genome browser
AA seq
784 aa
AA seq
DB search
MKALHVAEKPSVARQAAAVLGHGRAERKCSCSPYHPNWFWSGVFEFSAKDGTRFVVDEQV
FTSVSGHVEELDFVTPYHKWSACEPVDIFRRDLVQTRRFVPERNAKVAQNLGQLARTCQY
LVLWLDGDSEGEAISDEVQRICKLPPSMVFRARFSAVTPRDLFRACATLDRVNAKVVEAV
WIRQEIDLRAGAAFTRWLTRHIQRHYPQALICTSAIVASRRKGASGTSNLGRNERLQGSG
VSSADAAVVSYGPCQFPTLGLVVDRYRERREFQTKPFWTIRMRIQTTGDRASGNQVELCW
DRARIFDRFIAYVLFQRLHDAVRLPGALRMIACEKQPAHRSRPLPLSTVELQKEASRKLK
LSSAQTMEIAEQLYQQGYISYPRTETDRFPTDDRGISNLKALITLQSEDQRWSLLAKRLL
ETDDVSRGGFKAPRAGSHDDHAHPPIHPTSAAPPGTLSGDAARLYEYIARRFLASCSADA
SGERTIWRFAVFSGASEARTEAPQETCMFPANTVLETFTSKGLRITNLGYLEVFSPYEKW
LESTLPGDLECGAAAPEHFWLTELRLEESITEPPALLSEADLIAAMDRHGIGTDATIAEH
IKKIQERHYVVKQIIAEERRRQSHRAGTQVHDAAANSSDECDASQVTSRAHSATRTRERC
GLVSRSSVQRFVPMKLGQALVEAFESCHVHLARPNLRAEQERRQKLVAKGEASGSEALDE
LLTSFAEAFRRLVLERSKFDATFCKFFPKAEPPSLLRAPAALELTQSSVRRSCVVPTDES
NANE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctgcacgtggcggagaagccttcagttgcacgtcaagccgcagctgtgctt
ggacatggtcgcgcggagcgaaaatgcagctgttctccatatcaccccaactggttctgg
tctggtgtgttcgagttcagcgccaaagacgggacgcgcttcgtggtcgacgagcaggtc
tttacatctgtgagcggtcacgtcgaggagctagacttcgtcacaccttatcacaagtgg
agtgcctgcgaaccagtggacatatttcggcgggacctggtgcaaactcgccgctttgtg
ccggagaggaacgcaaaggtggcgcagaatctggggcaactggcccgtacgtgccagtac
cttgtgctctggcttgatggcgactctgaaggcgaggccatatcagatgaggtgcagcga
atttgtaagctgcctcctagcatggtgttccgtgcccgtttttcggcagtaacgcccagg
gaccttttccgagcctgcgctacgcttgaccgggtgaatgcgaaagttgtcgaggccgta
tggattcgtcaggaaatcgacttgcgtgctggggccgcattcaccaggtggctaacgcgg
cacatacagcgccattacccacaagcgctcatttgcacatctgcaattgtcgcctcgcgg
cgtaagggtgcctctggaacttccaacttagggcggaacgaacgcctgcaggggagcggt
gtttcttctgctgacgctgctgtggtgagctacggaccctgtcagtttccgacactcggc
cttgtcgtggatcgctaccgcgagcggcgcgaatttcaaacgaagcccttctggacgatt
cgcatgcgtattcagacgactggcgatcgagccagcgggaatcaagtcgagctttgctgg
gaccgggcacgcatcttcgaccgctttattgcatatgtcctttttcagaggctccacgat
gcggtacggttgccaggcgccttacgcatgatcgcttgtgagaagcaaccagctcaccga
agtagaccgttgccgttatcgacggtagagctccagaaagaagcctccagaaaactcaag
ctatcttcagcgcagactatggaaatagccgagcaactctatcaacagggctatatatct
tacccccgaacggagacggatcgattcccaacagacgatcgtggtatatcgaacctcaaa
gcactcattaccctgcaatctgaagaccagagatggtcattgctagcaaagcggctgctc
gaaaccgacgacgtatcacgtggtgggttcaaagcaccgcgcgcgggcagccatgatgac
cacgcgcatccgcctattcatcctaccagcgctgcaccgcccggcaccctgagcggcgat
gccgcccgactctatgagtatatcgctcgcagattcctggcttcatgctctgcggatgcc
agtggcgaacgcaccatctggcgtttcgccgtcttttcgggtgcatcggaggcgcgtact
gaagcaccacaggagacgtgcatgtttcccgcgaacacggtcttagagacattcacgagc
aagggtcttcgtatcacgaatctgggctatttggaagttttttctccatatgagaagtgg
ttggaaagcactttgccaggcgatttggaatgcggtgctgcggctccagagcatttttgg
ctgacggagctgcgtcttgaggaatcgataacagagccccccgcgctgctctctgaggcg
gatctcatcgctgctatggatcgccacggcatcggcaccgacgcgacgattgcagagcac
attaagaaaatccaggaacgtcattatgtggtgaaacaaatcatagcggaggagcggcgc
cgccagtctcatcgagccggaacacaggtgcacgatgccgccgcgaacagcagcgacgag
tgcgatgcctcacaagtgacgtctcgggcacactctgcgacgagaacgcgggaacgttgt
gggctcgtctcaaggagcagcgtacagcgtttcgtgcctatgaaactgggccaagctctc
gtcgaagcatttgaaagctgtcacgtgcatttagcgcgccccaaccttcgtgctgagcag
gaaaggcgccaaaaacttgtcgccaaaggagaagcctctgggtcagaggcactggatgaa
ctcctaacgtcttttgcggaagcgttccgacgcctcgtgctcgaacgcagcaagtttgat
gcgacgttctgcaagttctttccgaaagcagagcctccttcgcttttgcgtgctcctgcc
gctctagaactcactcagagcagcgtaagacgttcttgtgttgtgcccacggacgaatcg
aatgcgaacgaataa
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