Cyanidioschyzon merolae: CYME_CMH060C
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Entry
CYME_CMH060C CDS
T00175
Name
(RefSeq) eukaryotic translation initiation factor eIF-3 subunit A
KO
K03254
translation initiation factor 3 subunit A
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cme03012
]
CYME_CMH060C
Translation factors [BR:
cme03012
]
Eukaryotic type
Initiation factors
eIF-3
CYME_CMH060C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3a_PCI_TPR-like
DUF3135
Motif
Other DBs
NCBI-GeneID:
16993393
NCBI-ProteinID:
XP_005536042
UniProt:
M1UQG2
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Position
8:168810..172775
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AA seq
1321 aa
AA seq
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MSGAYPGRYGSMSRGGGTGGGGGGGGGYGGHRGRNQRFGSRYGRPILKPENALNRAEQLL
AVGQKSAAHEALYTLITEHTPINVGGREAQALVAQAQAQAQAAAQVAANAAAVAQEQDEG
GARSTAAAAAAAAAAAAAAASAIQSSTSGWSKVHEGIMMRLVELSVELRRPLALKESLHR
YRALCGVANTASLEAVVLHAVECSEAAVDAARTLAMESFHASAAAQSPITEDAGDAEGDG
NELISEGTDDIVADEVADSDDRGNATDDDAQPAWGVEVPQTLLLEANGMLASRTRIERQL
LAPTLMFAWEVFRMCLDILKNNIRVEKAYNEVAERALLFTAKFNRATEFRRLCDILRQHM
AGLVRTIVRSPQSEIDQVHWPTVQRMIRIRFQQADQAMASGHWQEAYRTMDDLHELLRIC
TRGRSPEILAGYFERLATIFETTDNLLLHALALYKLYLVRQAAAEALQNQDPNQDADGQV
PGPSSETPRDTAVRLLVATLSIPVKELSAHSKVMEVFADAATLTSFEQARQAKMLDLLQW
PSAASAGSNEAWDRLISNPTKSWLIGEVISNGIEEACPEALRELLYEFIDPGLLRWKQAG
KARLGTPQSLAAKAQRWFTSMHLDVGSEVAGVTGSGGVDGTGGDCTGAGAPSSKPGQSAR
ASMMPLSRAIIAELLLRIAQYYDSFLLWELRSMVNFLPFVQVHAIVLEFLRAELVPFRLD
FRKGVLYRFCRTIEQEELGDALCRIATRLQAAASTITQRASTADEHEIRILNAKEAAFPL
ERLEREQQRRVTQLEVLQSFLKQLDEVAQRMEREEQRQAQLEAARHAEEEKRRLAEEARR
RELEAIRREMEEKEQAELRRLKAEMDARRRVGLSASGAAAGLALPSSVAGIESTAAGASL
GTVGIGVDSVGGAGGPARSVWSRSGSGTAAVLSGARATSALPGVAVDSVPGIGAGAADGF
TAVGADALDHDGDRLSRQELLQQQQQERLQQRKMLEQKIFQLSRRMDYLDRALHEKQATH
LDQVHKEMVRELIARRQSAATCRLRQLQEQFESDLARRARLESIFRDPLYQKAVDHIKEE
ARARALREWKPRQGNGSPNQQTPIGNVSAEETPAEQTPGRTAAAAAAAEQQRQQQQPRSD
TGSNGVPASAYEAAAEHSPTATVPYPKQVPLAGTPTGNTVSATRSSGDNHSGPERPVPPA
GETVSEREQQARHAPAPALAPVAPRSGIVTIVHAADKGLLGDQPFVTPSTATSAGIPAPK
ATGNEESSQRRGYVPPHLRRQQQAPQRLAANQEPEQRAGLGARAGPRRGFGFTDSNPRPS
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgcttacccagggcgttacggtagtatgagccgcggtggtggtactggtggt
ggtggtggtggtggtggtggctacggtggtcaccgcggccgtaaccaacggttcggttcg
cgttacggcaggccgatcctcaagcccgagaacgccctgaaccgggcagagcagcttctg
gcagtgggtcaaaagtctgcagctcacgaagcgttgtacacgttgataactgagcataca
ccgataaacgtcggcggccgcgaagcccaagcactcgtcgcccaggcgcaagcgcaagcg
caggctgctgcacaggtggctgcgaacgcggctgccgtcgctcaggagcaggatgaaggc
ggtgctcgcagcacagctgctgcagctgcagctgcggccgcggccgctgccgcagctgca
agcgcgatccagtcgtcaacctcaggctggagcaaagtccacgagggtatcatgatgcgg
ctggttgagctcagcgttgagcttcgccggccactggcactcaaggaatcgctacaccgt
taccgtgcgctctgcggagtcgcgaacactgcttcccttgaagccgttgtgctccatgca
gtggagtgctctgaggcggcggtggacgcggcaaggacgctggctatggagagtttccac
gcgagcgccgctgctcagagcccaattacggaggacgctggagatgcggaaggcgacggg
aatgaactgatatccgagggcacggacgacatcgttgccgatgaggttgctgacagcgac
gaccgcggcaacgccaccgacgacgatgcccagcccgcatggggcgttgaggtgccccaa
acgctgctgcttgaggccaatggtatgcttgcgtctcgcacacgaatagagagacagctg
ctcgcaccaacccttatgttcgcatgggaagttttccgcatgtgcctggatattctcaaa
aataatattcgtgtagagaaagcgtataatgaagtagcagagcgagcgctgcttttcacg
gcaaagttcaatcgggcaacggagttccgccgattatgcgacattcttcggcagcacatg
gcaggtttggtgcgtaccattgtgcgctcgccgcagagcgagatcgaccaggttcattgg
ccgaccgtccagcgtatgattcggatccgctttcagcaggcagatcaagcgatggccagt
ggacactggcaggaggcctatcgtaccatggacgacctgcatgaacttttgcggatatgt
acgcgaggtcgcagccctgaaattttggctggttactttgagcgactcgcaactatcttc
gaaacgactgacaatctacttctgcatgcacttgcgctttacaagttgtatctggtccgg
caggctgccgcagaggctctccagaaccaggatccgaaccaggatgcggacgggcaggtt
ccaggaccctcgtcggagacgccacgagacacagcagttcgacttttggtggcgacgctt
tccatccccgtcaaggagctctctgctcacagtaaggtcatggaagtcttcgccgatgca
gcgacgctaacgagctttgagcaggcgcgtcaggccaaaatgctagacctgttgcagtgg
ccaagcgcggcctctgcgggctcgaacgaggcatgggatcgcttgatttcaaatccaaca
aaatcgtggctgatcggagaagttatatccaatggtattgaggaggcgtgccctgaagcg
cttcgcgaattgttgtacgaattcatcgatccgggactgctccgctggaagcaagcgggc
aaagctcgacttggaacgccacagtcgctggctgctaaggcacagcgctggttcaccagt
atgcatcttgacgtcggttccgaggtcgccggagttactggctcaggcggtgtcgatggc
accggtggcgactgtaccggggcgggcgcacccagcagcaaacctggccagagcgcacgt
gcctccatgatgccgctgagtcgtgccatcattgctgagcttttgttacgaatcgctcag
tactacgacagtttcttgctgtgggagcttcgctctatggtgaatttccttccgtttgtg
caggtgcatgccatcgtgctcgaatttcttcgagcggagctggtcccatttcgcctggat
ttccgaaagggtgtcctctatcgcttctgcagaaccatagaacaggaggagctgggcgat
gctctttgtcgcattgccacgcgcctgcaagcagcggctagcaccatcacacagcgagca
tccacagcggacgagcatgagatccgtattctgaacgccaaagaggcagcatttccgttg
gagcgcttggagagagagcagcagcggcgcgtgacgcagttggaagtgctgcagtcattc
ctgaagcaactggatgaggttgcacaacgcatggaacgcgaggagcaacgccaagcgcag
cttgaggccgcaagacacgccgaggaagaaaagcggcgcctcgcagaagaggcgcgtcgt
cgcgagctcgaagcgatccggcgcgaaatggaagagaaagagcaggctgaattgcggcgt
ctgaaagctgaaatggatgcacgccgaagagtcggcctctcagcgagtggtgcagcggct
gggcttgcgctgccctcaagtgttgctgggatagaatccaccgccgccggagcgtcccta
ggaaccgttggtatcggagtggatagcgtgggcggggctggcgggccagcgcgaagcgtc
tggagtcgcagcggatccgggacagcggccgtgctttccggtgctcgtgcaacaagcgcg
ctgcctggtgttgccgtcgactctgtgccgggcatcggtgccggtgcagcagatggcttc
acggcggttggcgccgatgcactggatcatgacggtgatcgcctcagtcgacaggagctt
ttgcaacagcagcagcaggagcgtctccagcaacgcaagatgctcgaacaaaagatattc
cagctgtctcgtcgaatggactatttggatcgtgcgctccacgaaaagcaggcgacgcat
ctggatcaggttcacaaggaaatggtacgcgaattgattgcacgtcggcagtcggcagca
acctgccgtctgcgtcagctgcaggagcagtttgagagcgatcttgcacgccgtgcgcgg
ctggagagcatttttagggatccgctttaccagaaggctgtcgatcacatcaaagaggag
gctcgggcacgtgcactgcgtgagtggaagccgcgtcaaggcaacggttctccgaatcaa
cagacgcctataggcaatgtatccgcagaagaaacccctgcagagcagacacctggtcgc
acagcagcagcagcagcagcagcagaacaacaacgacaacaacaacaaccacggagcgac
actgggtccaatggagtgcctgcttctgcgtacgaggcagcggcggaacattcgccgaca
gcgactgtcccgtatcccaaacaggtgcctctggcgggtacacccactggcaataccgtg
agcgcgactcgctcgagcggcgataaccactcggggcctgagcggccggtgccacccgct
ggagaaacagtctccgaacgtgaacaacaagcgcggcacgcacctgcacctgcacttgca
cctgtagcgccccgttctggcattgtgacgatcgttcacgctgcggacaagggtctcctc
ggtgatcagccgtttgtcacgccatccacggcgacgtcagctggaatcccggccccgaaa
gcgacaggaaatgaagagtcgagccaaaggcgtggctacgtaccgccacacttacgccgt
cagcaacaggcaccacagcgtctagctgcaaaccaagaaccagagcaacgagcagggcta
ggtgccagggccgggccacggcgcggttttggcttcacggactcgaatccacgcccgtct
tcatag
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