KEGG   Cyanidioschyzon merolae: CYME_CMH082C
Entry
CYME_CMH082C      CDS       T00175                                 
Name
(RefSeq) DNA polymerase epsilon, subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03030  DNA replication
cme03410  Base excision repair
cme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CYME_CMH082C
   03410 Base excision repair
    CYME_CMH082C
   03420 Nucleotide excision repair
    CYME_CMH082C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cme03032]
    CYME_CMH082C
   03400 DNA repair and recombination proteins [BR:cme03400]
    CYME_CMH082C
Enzymes [BR:cme01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CYME_CMH082C
DNA replication proteins [BR:cme03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    CYME_CMH082C
DNA repair and recombination proteins [BR:cme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      CYME_CMH082C
SSDB
Motif
Pfam: DNA_pol_E_B
Other DBs
NCBI-GeneID: 16993414
NCBI-ProteinID: XP_005536058
UniProt: M1VBN0
LinkDB
Position
8:209975..212152
AA seq 725 aa
MSVDPQTRVLVDELHRLGFVVEPAAVYLLQERFCSDLELSLLDEEERVAALASLVQRLRE
TALEQGTRTISTEAVERTLKLGSGGSFGTDRSGTGAGITKHGRVNVANGWKLHVTRELKE
TDLLQLPPIAKRREALAFRYQTLYKDLERCLQISALRREGTTQESPWPRQVVPVGVLRSA
RASENRLQIVMGMLSAQGVDEWLLEDPTGSIALRLHGERSAVDDYRLCGTKSCSLVCAGC
MLVVIGVYDPIGDAIVVRELRQPPLCPDWSMKLLPLEETPESSAPLSHAGDLRFTGTTTL
DASLDAHASDCSVRLPHPESPQVMDASRGNLLAAKDFPEVHGDVSVAQELQGNVSLPRAD
PESEVESLDDPDGELHILFAADLALDDSTSYAKWRKLLRELYLPNEASTMQGTSTLPPTD
EAAEHPSRPEASLPHCIFVLCGPFLGSKCMSWPPVTEPAHEDAPTAGAVQGESSLTPNEQ
ALLLALRRFGKMLAAFRAPLRSSGSEFILIPAERDMDCFGEVLPRPPLSNLFVETLRVHS
GLRTEQIRTLSDPARFDVLRGERCRYSVLVHATERLCERLAAEALPWPAEREQRNYAADM
QQFASNVFRTILHQRHVAPLPVYKQPIFWTFDRQYLWTLTDPNRFVDFLVLADNTLPLCM
ETYAVGGFASLAGGLEPSMVLCIAPGSFSRDGTAVWIRLTGQAQQRIQPRSLHLVAGQQA
EPSDL
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgtcggtggacccccagacgcgagttttggtcgatgagcttcatagactgggatttgtt
gtagaaccagctgctgtttacttgctgcaggaacgattttgctctgatcttgagcttagt
cttctggatgaagaggaacgagtcgcggcactagcaagccttgtgcagcgcttgcgggaa
actgcactcgagcagggaacgcgaacaatatccacggaggcagtggagcgaacactgaaa
ctgggttcaggcggcagtttcggaacggatcggagtgggactggcgctggcataacgaaa
cacgggcgcgtgaacgtggcgaacgggtggaagctccatgttacccgagagttgaaggaa
acagacttgctgcaactgccgcccatagccaaacgcagggaagcgctagcgtttcgatat
cagacgctttacaaagatcttgagcgttgtttgcagatatctgctctacgtagggaaggt
acaacacaggagagtccctggccaaggcaagtcgttcctgttggcgttttgcgatctgcc
cgtgcgagcgaaaaccgcctgcagatcgtgatgggcatgctcagtgctcagggtgtggat
gagtggttgctcgaagatccgactggatcgatcgctcttcggctacatggagaacgttct
gctgtggacgattaccggctctgtggcacgaaatcgtgctcgctcgtgtgcgcaggatgt
atgctcgttgtaattggcgtttacgacccgataggagatgcgattgtcgtgcgcgagctt
cgacaacctccgctttgtcctgactggagcatgaagttgctgccgctggaagagactccg
gaatcatcagcaccgctgagccatgcgggcgacctgagattcactgggaccacaactctg
gatgcttcgctggacgcgcacgccagcgattgctcggtcaggttgcctcacccagagtca
ccgcaggtaatggatgcttctcgcgggaatctattggccgcgaaggattttcctgaggta
catggcgacgtatccgtggcgcaggaattacaaggcaatgtatctcttcctcgagcggat
cctgagagcgaggtcgaatccctggacgacccggacggcgaactgcatattctgtttgcg
gccgatttggcccttgatgacagcacctcgtacgcaaagtggcgaaagctgctcagggaa
ctctacctaccgaacgaagcctcaacgatgcaggggacgagcacactgcctccgaccgat
gaagcggccgaacacccttccaggccagaggcctccttgcctcactgcatttttgtcctt
tgcgggccattcctaggttcaaaatgcatgtcgtggccgccagtcacggagcctgcccat
gaagatgcaccaacggctggtgctgtgcaaggcgagtcctcgctcacgccgaacgagcaa
gcgttgcttctggctttgcgacgttttgggaagatgctggcagcgttccgagccccattg
cggtcgtctggctctgagttcattctgatcccagcggagcgggatatggattgctttggt
gaggtgttgccgcggccgcctctgtcgaacctctttgtggaaacgttgagagtgcatagt
ggactccgaactgagcagatccgcacgctctcggatccagcacgattcgatgtgctgcgg
ggagagcgctgccgctacagcgtcctcgtccacgcaacggaacgcctgtgtgaacgtcta
gctgcagaagcacttccatggccagcggaacgtgagcagcgcaactacgctgcggatatg
cagcagttcgcttccaatgttttccgcacgattcttcaccagcgtcatgtcgccccgttg
cctgtatacaagcagcctatattttggacgtttgaccggcaatatttatggacgctcaca
gaccctaaccgttttgttgattttctcgtgctcgccgacaatacgcttccgttgtgcatg
gagacatatgcagttggcggcttcgcatctctcgcgggcggtctcgaacccagcatggtt
ctctgcattgccccgggaagcttttcacgtgatggaactgcagtatggattcggcttact
ggtcaggcgcagcagcgtattcagccacgatcgctgcatctcgttgcagggcaacaagca
gagccgagcgacctgtag

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