Cyanidioschyzon merolae: CYME_CMH155C
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Entry
CYME_CMH155C CDS
T00175
Name
(RefSeq) probable ATP-dependent DNA helicase RecQ
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cme03032
]
CYME_CMH155C
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMH155C
Enzymes [BR:
cme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYME_CMH155C
DNA replication proteins [BR:
cme03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
CYME_CMH155C
DNA repair and recombination proteins [BR:
cme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CYME_CMH155C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-GRF
HEM4
DUF746
Motif
Other DBs
NCBI-GeneID:
16993482
NCBI-ProteinID:
XP_005536109
UniProt:
M1VGK9
LinkDB
All DBs
Position
8:complement(383947..386712)
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AA seq
921 aa
AA seq
DB search
MEPAPGPQVVTTPAVRVTAPPPTFGRFQTKKKRKRALARPNDARAGFAQRRRRGEHRTGL
WAGRSRWSHPLRQATCVDDSLADPERATLTAEDVADCPWQPDGQQVPLDPPVCREHNQPC
IRRVSRGYGGRIQRAYYVCGQRPRCSFFLWEHVHRLQCQAATSWLLESAPQPSCDISMLR
QCERAPALYQVSESSDFRSPVPELMPGLELRSEQSEALQHLLRGESVLLGIRPGSRRSMI
YELYAALTSGTVLVCEPFRSLIREALENLPSQLPAAEITNNGFKTACGFQSLEATQIGAY
KVLFCTPERLCQPQVQSFVEHLHPSAVVLDEAHLLLPWSAMFRPSYWQIQPLLKQHLAAD
TGCVLLAQTATPTPAVRACLATVVSGALVEALPPKSDLVPSKLHFSFSTPVDRYRTLVRM
LSKDEQWTGPVLIYVSRQRDADALAAWLQNHLIDARSYHAGLNPEQRRKVEEAFRQHHCR
VVVATSSSALRTLAPAACCTVHWSIPNSIEDLLQQTSCAGKDRSSAFSHLFYDAADTERL
RALALAEQVEPALIRKLVRSLVASVVVTSESSHPGNEGAAERFTLLDLATLQNTLDIPAT
ILEQLIIRFTVIAGEALSTVGAAPWRARQRVPTTLRITLHQAVSCLPEDIRSFCQELVRL
SAAEAPHRLRHPSICNVRLDAVSQALSMSPFEVLDRCSRLQYQGIITMQTIGECLVVCHS
GQPPPPPLATQVRAWTDALVAERLAHQRAFLERLEQMELLARAVLQLGRTEACSSQIEAH
FREWVDHYFRTGQLPPACVAISSPRTPVSAHTGLANDHALLMADIRALLHSLYRSGQEMH
AEQDLCTPPRIPCTALQITRILQGIGSPGFPATRWKTFPFWGKYVHASFAYIQETVEHVL
QRLLSQEDAFTPANRAEADPP
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagccggcgccgggccctcaagtcgtcaccactccagcggtccgagtgacagcaccg
cccccgactttcggtcgattccaaacgaagaagaagagaaagcgagctttggcgcgaccg
aatgatgctcgagccggtttcgcacagcgacgtcgtcgcggtgagcatcgaactggcttg
tgggcgggccgctccaggtggagtcacccgcttcggcaagctacatgcgttgatgactcg
cttgcggatccagaacgggccacactcactgcggaggatgtcgccgattgtccctggcaa
cccgatggacaacaagttccattggatccaccggtttgccgcgaacataaccaaccgtgc
atacggcgtgtctcgcggggctacggcggccggatccaacgagcgtactacgtttgtggg
cagcgtcctcgctgctcgttctttctatgggaacacgtccatcgactccagtgtcaagcg
gcaaccagctggttactcgagtccgccccgcagccttcatgtgatatatcgatgctgcga
cagtgcgagcgcgcaccagccctctatcaagtctctgaatcttccgattttcggagtccg
gtcccagagctcatgcctggactcgagctgcggagcgagcagtccgaggctctgcaacac
ctgctccgcggcgagtccgtactcttgggtatacggcctggaagccgtaggtccatgatt
tacgagctctacgctgcgctcaccagcggaactgttctggtgtgcgagccctttcgatca
cttatccgcgaggcactcgaaaacttgccgtcccagttgcctgccgctgagatcaccaac
aatggcttcaagaccgcatgcggcttccagtctctagaggcaacgcaaataggtgcgtac
aaagtgctcttctgcacgccggaacgcctctgccagccccaggtgcagtcgtttgttgag
catctgcatccgagcgcggtcgtgcttgacgaagcgcacctgctgctcccgtggagcgcc
atgttcaggccgtcctattggcagatccaaccgctgctgaaacaacatctcgccgccgat
actggatgcgtcctgctcgcacagaccgcaacgccaacaccagcagtacgagcctgcctt
gccaccgtcgtatccggagcattggttgaggcgctacctccaaagagcgacttggtgcct
tcgaagctgcactttagcttttcgacacccgttgatcgataccgcacgctcgttcgaatg
ctcagcaaagacgaacagtggacaggtcctgtgctcatctacgtttcgcgacagcgcgat
gcagatgcacttgcagcctggctccaaaaccacttgatagacgcccgcagctatcacgcg
ggactcaaccccgaacagcgccgcaaagttgaagaagcatttcgccagcatcattgtcgc
gtggttgttgccaccagctcgtccgcattgcgaacgctcgcacccgccgcttgctgcaca
gtccactggagcattccgaacagcatcgaggaccttttgcagcagacaagttgtgctggc
aaagaccgctcgagcgccttcagtcacctgttctacgatgcagccgatacagagcgtttg
cgcgcgctcgctctcgccgagcaggtagagccggccctgattcgcaaacttgtacgcagt
ctcgttgcgagcgtcgttgttacctcggaatcctctcatcctggcaatgaaggcgctgcg
gagcgctttacgctcctcgacctcgctacactacagaataccttggacattccagcaacg
atcctggaacaactcatcattcgattcactgtcattgccggggaggcgctttccacggta
ggcgcagcgccgtggagagcacgccaacgcgtgcccacaacgctacgcatcacattgcat
caagctgtatcctgtttgccagaggatattcggagcttctgccaggagctggtgcgcctt
tccgcagccgaggctccgcatcgcttgcgccacccgagcatctgtaacgttcgtctcgac
gctgtctcacaggcgctctctatgtcgccctttgaggtgctcgaccgctgcagccgtcta
cagtaccaaggcatcatcacgatgcaaacaattggcgaatgtctcgtggtatgtcattct
ggtcagccgccgccgccgccgcttgccacgcaagtccgagcctggacggatgcgctggtg
gcggagcgcctcgcgcaccagcgcgcgttcctcgaacgtctcgaacagatggaacttcta
gcgcgcgccgtgctgcaacttggacgaactgaggcttgttctagccagatagaagcgcat
tttcgcgaatgggtggatcactactttcgcactgggcagctgccgcctgcctgcgttgcc
atctcatcgcctcgtactccagtgtctgcgcataccggtctggccaacgaccacgcactc
ttgatggccgacattcgcgccctactgcattcgctatatcgaagtggacaggaaatgcac
gcggaacaggacctatgcacaccaccgcgcattccgtgcaccgccctgcagatcacgcgt
atactgcagggcatagggagtccgggtttcccggcgacgcgctggaaaacctttcctttc
tgggggaaatatgtgcatgcatcttttgcatacatccaggaaaccgtcgaacacgttctt
cagcgcctactctcccaggaagacgcgtttacccctgccaaccgcgcggaagctgatcct
ccgtaa
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