Cyanidioschyzon merolae: CYME_CMH168C Help Entry CYME_CMH168C      CDS       T00175                                  Name (RefSeq) pre-mRNA splicing factor PRP8   KO K12856   pre-mRNA-processing factor 8 Organism cme  Cyanidioschyzon merolae Pathway cme03040   Spliceosome Brite KEGG Orthology (KO) [BR:cme00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CYME_CMH168C  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cme03041]     CYME_CMH168C Spliceosome [BR:cme03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     CYME_CMH168C  Complex C    U5 SnRNP specific factors     CYME_CMH168C BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PROCN U6-snRNA_bdg PRP8_domainIV U5_2-snRNA_bdg PRO8NT RRM_4 Motif Other DBs NCBI-GeneID:  16993494 NCBI-ProteinID:  XP_005536120 UniProt:  M1V7K2 Structure PDBPDBj LinkDB All DBs Position 8:complement(424318..431505) Genome browser AA seq 2395 aa AA seqDB search MPKRAFFGRDEEADQTLDLKRKRPRRAFGADQPFFKPYTSPDIFRKLASLARIELERSEN DLENSAHRGNRDRHISRNTDALTLNALRYLPHAVYKWLEHMPAPWEPTRFVPVIFHHTGA LAFIEGSRRVPEVVHRAQWARWCAYLDRRRHEAHVASTSSGKRQRDLTRSFVRLQVPAFD DDEPSPSFREFVYHRTLPTPFANDADAAAEYERIQQLAANLHTPEARAALYRMSLPWAPH PNDLDPSQFYLRNRLTLRRVHRLEHERANLRRKSLHAGSLHSEGAHLLQEDWDDFTELGM HSILPGQRRAPELHQAYPYLYDAFDERTPNPEQPLWHHHAPRPLMWPPTPPPHPLWPSAW SWQPTLAPLLHSSAQGAGERIIPDTSEGASAQRTRYRAHPALGDFDLDACGERVGAWLDL LYAPRPYKGRCVRKRKRMQDIDMERELYWQLERVHYMRPKSTAAVHSLLKRRCRQAEAQR LRYLRKERGRGRKQSTLAIQSASGDAGDEAEKQHRRPDLLRTLRQSGFFYRTSMDWLEVG IWLCDAARSMFLLLLRRKRFFFLSMDYNFQIVPLRTLTTKERKQSRFGNAFHLMREWMRM VKLIVDVHLRYRAGLGADAIQLADSITYIESHIGELTGLYRYKYRVMRQIHATKDLKHLM YQRFGWSGPGKACWQPLWRQWVHLLRGLMPLLEQWLGNLLNRHFEGREPLRMAQRTVTKQ RLESQFDVALRQETIARLRQLLPAARQPLYTRRVLQHMHQAWRCWKANIPWHVRDMPPEI DRLVRDYVQQRAQWWIEGARRFAIAFRSGRSMDKALVRQMYGRLARLAVHHEQAHQRQYL EHGPFLLPTEAASILYRFATYLEKAGVADSCPWQLPWFAADNADSGLAPALLQLAIERLR PETEGEHCPPGLGELVTEAEAAPAAMLYRIRQRLQAVQMRHQVELRFYDDADLTPVYRID SFERLVDAFLDQWLWYKATETRLFPAHVQPCDDELPPVHVLRFVERLDAIPHLWTLGTAP NKSFLVLIQTPLPGLFQRADLLVLDRLLRQLLAPEIVDYLIARCNATITFKDMRYTQSVG ILPGWEFSGFLQQLYGLAAVDLAFRAPDMDADLLSLPSWPPAELAGDHDVRRNDARSCPS MRLLAYERILDRLYALIRVPEETARVAVTRLEQRYERHPERETLLDAALYPSRRCWPSAV RMRLRPFDCLLGRALFDAIRDRIGPGVSALRPLVEMPESQTAVSVVSGPENPSLFFEMFG FEVRMLASGFDRILPAGMGSARPASEAAATAGMRWSLPSGRTVAYVRVSPHALQRWALDV QRLLMATIHAPFTRVAARWNALALHFAGMYRQVAANDPTVRQFVQHAQERVQNRIKLGLN SKMPVRFPPVVFYAPRSLGGLEMMNIGHDPVPSLWSFIPSWLDEIADAELLERELQERAQ AFGAHLDRRLLPPAWLHRGLPRLAARYHPQGALWTLDHGYRVRSLLRVHVTGRKNALWWL DFMHDGRLWELDDYRSQVTHALGGVPAILSHTLFAATGYRDWRGIVWGDHGFEHKLAGRP LTRAQRSGLVQIPNRRFTLWWSPTINRSRVYMGFRAQLDLTGIFMYGKLSTLKISLLQVF RGHLWQRIHESLVLDLCKALDTELGARSREARVAVTVQKERIHPRKSYRMHWSSADIRID FEQPILVSGDALPVDEAVAFESNAGGQGRSSLRPPGSDAAAKIYWIDVQLRWGDYDDHDA AQYAAQKFRAYTAPGASSLYPSHHGLVVVFDLAYGEWSAFGHACAMGVVSIVTEESRRML MHNQALALLRERIRKALQLYVMETVESETLQAATTTTSASDTIPLLVGCGGDLWRQRLWI VDDRTAYRPHANGVIWIWETSTGRLFVKIVHRTTWAGQTRRAQLAKWKCAEHVLTMLRSQ PTEELPRGIVLAQTASMDPLKTLLAGTEYAKIPVRAGAAAMPLQALMALPEIRDRTQTAR SSELSIWSGYADWLEHVPVWIASARFLLLLHALDRAPERVLQLVWPQRSADEESAGSATP WLWPALPETDWRRLELELQSLVPVRLRPAHVAGDQPGGRDDDGTEQVLEHTRPKTVAAFD RYGNVISVETTTPFERQEYRTSSVTVTNAEQQRLLSLYRRLPDVLENLHVVEPGHTSGSL YGGERPEQATISAMPHLAKRFELHLPRGLVRGLLLAGMTCGQLWGTRTANADTVVWIAWA LRHHDAEASTPLPSMVEAAACFRPGSVQAIGWIQACLDVGRPPAPGPGVHAPHDVQVILY LQGEERQIDLASPSLDRHAAEAVQTHDVHASRAPSAHAFGHVIGSTHAMSRALGVLQAWT GGGSGDVNDPQSVHVRVRLRDDLSAVFLYAKDGRLIARPPGRLFETIPAPIEEGT NT seq 7188 nt NT seq  +upstreamnt  +downstreamnt atgcccaaacgtgcgtttttcggacgcgacgaagaggcagatcagacgctggacctgaag cgaaagcggccacgccgtgctttcggagcggatcagccatttttcaaaccgtatacctcc cccgatattttccgcaaactagcgagtcttgcacggatcgagttggagcgaagcgaaaat gacctggaaaacagtgcccaccgtggtaaccgagaccgacatatctcccggaacacagat gcactgacactgaacgcgctccgctaccttccgcacgcggtgtacaaatggctggaacac atgccggccccttgggagccaacgcggtttgtacccgtgattttccatcacactggtgcg ttggcttttatcgagggttcacgtcgagtccccgaggtcgttcatcgggcccaatgggcg cgttggtgcgcctacctcgaccgtcgtcgtcatgaggcacacgtcgcctcgacaagcagc ggaaagcggcagcgagatctgacgcgttccttcgtacgtttgcaagtgccggcgttcgac gacgatgagccgtcaccgagcttccgcgagtttgtctaccatcgaacgctgccgacacca tttgctaacgatgcagacgcggcagctgaatacgagcgaatccaacagctcgccgcgaat ttgcacacaccggaggcgcgtgctgcgctctaccggatgagtttgccgtgggcgccacac ccgaacgatctggatccaagtcagttctatctgcgaaatcgcttgacattgcgacgagtg catcgactcgagcatgagcgtgcaaaccttcgacgtaagagcctacacgccggctctttg cacagcgagggcgcgcatctgctccaggaggactgggacgatttcacggagctcggtatg cattccatcctgcctggtcaacgtcgcgctccagaactgcaccaggcttatccgtacctg tacgacgcattcgatgaacgcaccccgaacccagagcaaccgctgtggcaccaccatgcg ccgcggccgctcatgtggccgccaacaccaccaccgcacccgctctggccgagtgcgtgg agctggcagcctacgctagcaccgctcctgcacagcagtgcacaaggcgctggcgagcgc atcatcccagacaccagcgaaggcgccagcgctcagcgtacgcgctaccgcgctcatccg gcgctgggcgatttcgatctggacgcgtgcggcgaacgcgtcggagcctggctcgatttg ctctatgcaccgcgtccatataagggcagatgtgttcgaaaacggaagcggatgcaggat atcgacatggaacgcgagttgtactggcaactggagcgcgtccattacatgcgcccgaaa agtactgccgcagtccacagcttgttgaaacgacgctgtcgacaagcagaagcacagcgt cttcgctacctgcgaaaagaacgtggtcgcgggcgcaagcaatcgactttggcgatccag tcggcctctggagacgctggcgatgaagctgagaagcagcaccgacggccggatctgctg aggacgttgcggcaatcgggatttttttatcgcaccagtatggattggttggaggtcggc atctggctgtgcgacgctgcacgatcgatgtttttgctacttttgagacgaaaacgattc ttctttctgagcatggactacaattttcagatcgtgccgttgcgtacgctgacgaccaaa gaacgaaagcagtctcgcttcgggaatgcgtttcatttgatgcgcgaatggatgcgtatg gtgaagctgattgtggatgtgcatctgcggtatcgggcgggtctcggcgcggatgccatt caactcgccgacagcatcacgtacatcgaatcacatatcggtgaactgacaggtctctat cgttacaagtaccgggttatgcgccaaatccatgcgaccaaggacctcaagcatcttatg tatcagcgtttcggatggtcgggtcccggcaaggcctgctggcaacccctctggcggcaa tgggtgcacctacttcgaggcctgatgcccttgctcgaacagtggttgggtaacctgctg aatcgccattttgaaggacgcgagccgctgcgcatggcgcaacgcaccgtcacaaagcaa cgactcgagtcgcagtttgatgtggcgctacgtcaggagactatagcgcgtcttcggcaa ctgttgccagcagcgcgtcaaccactatatacgaggcgtgttctccagcatatgcaccag gcgtggcgctgctggaaggccaatatcccgtggcacgtacgagacatgccccctgaaatc gacagactcgtacgggattacgtgcagcagcgggcgcaatggtggatagagggtgctcga cgcttcgcgattgcgtttcgaagcggtcgttccatggataaggcacttgttcgccagatg tacgggcgacttgctcgtcttgccgttcaccatgagcaggcgcatcagcggcagtatttg gagcacggtccctttctgttgccgaccgaagcagcatcgatattgtacagattcgcaacg tacctggagaaagcaggtgttgccgactcatgcccttggcaattgccttggttcgccgca gataacgcggattccgggctagctcccgcattactgcaactcgcgatcgagcgtctccgc ccggaaacggagggcgagcactgtcccccggggctcggcgaacttgtcacagaggcagag gcagcgcctgcagcgatgctgtatagaatccggcagcgactgcaggcggtgcaaatgcgt caccaggtggaactccgcttctacgatgacgcggacctgacgcctgtgtatcggatcgat tcctttgagcgactggtggacgctttcctcgatcaatggctctggtacaaggccacggag acgcgcctttttccggcccatgtccagccatgcgacgatgagttgccgcccgttcacgtc ctccgtttcgtcgaacgcttggatgctatacctcatctgtggacactcggaacagcacca aacaagagcttcctggtcctcatacaaacgccattgccagggctatttcagcgcgcggat ttgctggttctggatcgattgctgcgacagttgctcgcacccgaaatcgttgattatcta attgcccgctgtaatgcaacgattacgttcaaagacatgcgttatacgcagtcggttggc atcctgcctggttgggagttttcaggtttcctgcaacagctctatggtctggcggcggta gatctagcgtttcgcgcaccagatatggacgcggacctgctgagcctgccgagctggccg cctgccgaactcgctggcgaccatgacgtgcgacgcaacgacgcccgtagttgcccgtcg atgcggctgcttgcctacgaacgaattctcgatcgactgtatgcgctgattcgggttccc gaagagactgcgcgtgtggctgttacgcgtctcgagcagcgttacgaacgccatccggag cgggagacacttctcgacgcggcgctgtaccccagtcgacggtgctggccgagtgcagtg cgcatgcgcctgcgccccttcgactgtctgctgggtcgagccctctttgatgcgattcgc gatcgcattggcccgggcgtgagtgcgctccgaccactcgtcgagatgcccgaatcccag actgcggtaagcgtcgtgtcagggcccgagaatcccagtcttttcttcgaaatgtttgga ttcgaggtgcgaatgctcgcaagcggttttgacagaatcctgcctgctggcatgggcagc gctcgacccgcatcagaagcagcagcaactgcagggatgcgttggtcattgcccagcggg cgcaccgtggcgtatgttcgcgtctcgccgcacgcgctgcagcgatgggcgctggatgtt cagcgcctgttgatggcgaccatacatgccccatttacgcgcgtggcagcccggtggaat gcgttagcactccactttgccggcatgtatcgccaagtcgcagcgaatgatccaaccgta cggcaatttgtccagcatgcccaagagcgcgtacagaacaggatcaagctgggtctgaac tcgaagatgccggtgcgcttcccaccggtggtgttctacgctccgcgcagcctcggcggc ctcgaaatgatgaacataggccacgacccggtgccgtcgctgtggtccttcataccaagc tggctcgatgagatcgctgacgcggagttgctggagcgcgagcttcaagaacgagcgcag gcatttggggcacacctcgatcggcgactgctgccaccagcatggctgcatcgcggtctg ccacgtttggctgcacgctatcacccgcaaggagcgttgtggacgctcgatcacggctat cgtgtgcgaagtctcttgcgcgtgcacgttaccgggcggaagaacgccctctggtggcta gatttcatgcacgacggacgcctttgggagctggacgactaccggagtcaggttacgcat gctttgggtggcgtgccggcaatcctgtcgcatacgctctttgcggcaactgggtatcga gattggcgaggcatcgtctggggcgaccacggctttgagcacaaactcgcgggcaggccg ttgacgcgggcgcagcgatctggacttgtccagatacccaatcgccgattcacgctctgg tggtcgccgaccatcaatcgcagccgggtgtacatgggcttccgcgcccagctcgatctg acggggatcttcatgtacggcaagctttcgacgctcaaaatcagccttttgcaggtgttc cgaggccatctctggcagcgtattcatgaaagtctggtacttgatttgtgcaaagcattg gatacagagctgggggcgcgctcgcgcgaggcgcgtgttgcggtcacggtgcagaaggaa cgaatccatccgcgcaagtcttatcgcatgcactggagcagcgcggatattagaatcgat ttcgagcaaccgattctcgtgtccggtgacgccttgcccgtggacgaggccgtcgccttc gaatccaatgcgggcggtcaagggcgatcgtcgctgcggccgccaggtagcgacgcggca gccaaaatctattggattgatgtccagctccgttggggcgactacgacgaccatgatgcc gcgcaatacgcagcgcaaaaatttcgggcgtatacagcaccgggagcgtcgagtctgtac ccgtctcaccatggactggtcgtggtctttgatctagcctacggcgagtggtctgctttt gggcacgcctgcgccatgggcgtcgtgtcgatcgtgaccgaggaatcgcgccggatgctt atgcataaccaggcactcgcgctccttcgtgaacgcattcgcaaagcgcttcagctctac gtcatggagacggtggaaagcgagacgctgcaggcggcgacgactacgacatcggcttcc gatacgatacctctgctcgtggggtgcggcggcgacttgtggcggcaacgcctctggatc gtggatgatcgcactgcgtacaggccacatgcgaacggtgttatctggatatgggagacg tcgacagggcgactgtttgtgaagattgtccatcggactacgtgggctggccaaacccgg cgagcgcaactcgccaagtggaaatgcgctgagcacgttttaaccatgctccgttcacag ccaactgaagagctaccgcggggcatcgtgctcgcacaaaccgcatccatggacccgttg aagacgctcttggcaggcaccgagtatgccaaaattcctgtgcgtgccggtgcggcggcc atgccgctgcaggcgctaatggcgctgccggagatccgcgaccgtactcagactgcgcgc tccagcgagctttcgatctggagtggctacgcggattggcttgagcatgtgcccgtgtgg atcgcgtcggcgcgcttcctgctcctgctccacgccttggaccgggcgccagagcgtgtc ctgcagctggtgtggcctcagcggtcggcggacgaggagagcgcgggctccgcgacacct tggctgtggcccgcgcttcccgagactgactggcgccgtctggaactagagctccagtcg ctggtgcccgtgcgtctacgccctgcccatgtcgctggtgatcagccaggtggcagggat gacgacggaacggagcaggtgctggagcacacacgaccgaagacggttgccgcattcgac cggtatggcaatgtgatttcggtggagaccaccacgccatttgagcggcaggagtaccgc acgtcgtcggtcacggtaacgaatgcagaacagcaacggctactgtccttgtaccgacga ctcccagacgttctcgaaaacctgcacgttgtcgagcctggacacaccagtggcagtctg tacggaggcgagcgcccggaacaggcgacgatctcggcgatgccgcatctcgccaagcga ttcgagctccatctaccgagaggcctcgtccgcggtcttttgctcgcgggtatgacttgt ggccaactctggggcacgcgcaccgccaacgcggatacagtggtttggatcgcctgggcg ctgcgtcatcatgacgccgaggcatcgacaccgttgccgagcatggttgaggcagcggcc tgctttcgccctggctcggtgcaagcgatcggctggattcaagcgtgcctcgatgtgggt cggccaccagcgccaggaccgggggtgcatgcgccccacgatgtgcaggtcatactctat ctccagggcgaagaacgccaaatcgatttggcatcgccgtcgctcgatcgccacgcagcc gaagcagtgcagacacacgatgtgcacgcatcgcgggcaccgagtgcgcacgcattcgga cacgtcatcgggagcacgcatgcgatgtcacgcgccctgggtgtcctgcaggcgtggact ggtggcggctccggcgacgtgaacgatcctcaatccgtgcatgttcgcgttcgactgcgt gatgatttgagtgctgttttcctctacgcaaaagatggtcggctgattgcgcgcccgccg ggacgtttattcgaaacgataccggcaccgatcgaagagggaacttag

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