Cyanidioschyzon merolae: CYME_CMH260C
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Entry
CYME_CMH260C CDS
T00175
Name
(RefSeq) WD-repeat protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
cme
Cyanidioschyzon merolae
Pathway
cme04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
CYME_CMH260C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CMH260C
Membrane trafficking [BR:
cme04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
CYME_CMH260C
mTORC2 complex
CYME_CMH260C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_SCAP
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_RFWD3
Nbas_N
WD_LRWD1
Beta-prop_WDR11_1st
Beta-prop_IP5PC_F
Nucleoporin_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
16993580
NCBI-ProteinID:
XP_005536190
UniProt:
M1V7M5
LinkDB
All DBs
Position
8:complement(670974..672074)
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AA seq
366 aa
AA seq
DB search
MSKKVILATGGYDHTVRFWEAASGVCFRTIQFPESHINRLVFSPDKVFLAVAANPRIVVF
DALNNVASPVIGLEGHRGNVVSVGYEAFGSWLYSGSEDGTICTWDPRSGKRSHVFCNRAG
VTAVCLHPSQRELISADCQGTVRTWDLIANRLNRELKPQDDVPISTMALAADGSLLSVCN
HEGACYVWRVCQAGTGTGEADAEFYELERLRDASPIPLTRSDSDLTEMQHWNRSPSRQRV
VQRPGTPATEPVDFQPSTTWSAHTRYVLQSSFSPNGKMLAMALDSGFIRLWGVQRSVGAT
WQQTQVLGRHQKWAWDLVFSDNSEFLFSCSSDRRACLWDLSSGSVIRTYEGHKLAVTALA
VSVTTL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaagtcatcctcgcaaccgggggttacgatcatactgtgcgattctgggag
gctgccagtggtgtttgcttccgcacgattcagtttcccgagtctcacatcaaccgactg
gtgttttcaccagacaaggtcttccttgcagtggctgcaaacccgcggatcgtggttttc
gacgccctgaacaacgtagctagcccagtcattggcttagagggacatcgcggcaacgtt
gtcagtgtcgggtacgaggcttttggaagctggctctattcagggtctgaagatggtacc
atttgcacctgggatccgcggtcagggaagcgttcacacgtattctgtaaccgcgctggg
gtcacggcggtgtgtctgcatccatcgcaaagggagctgatatccgctgactgccagggg
actgtacgcacatgggatctgatcgcgaatcgtctgaatcgtgaactgaagccacaggac
gacgtcccgattagtaccatggccctcgctgctgacggtagtctgctgtcggtctgtaac
catgaaggcgcctgctatgtatggcgtgtatgccaagccggtaccggcaccggcgaagca
gacgcggagttttacgagctcgagcgcttgcgtgacgcttcaccgataccactcacccgc
tcagatagtgacctcaccgaaatgcagcactggaaccgcagcccgagccgacagcgagtt
gttcagcgacctgggacaccagccactgaaccggtcgactttcaaccctcaacgacttgg
agtgcacacaccaggtacgtgctccagtcgagcttcagtccaaatggaaaaatgttggcc
atggccctggactctggtttcatccgactctggggcgtacagcggagcgtcggtgccact
tggcagcagacgcaggtgctgggacgccaccagaaatgggcatgggatctggtgttttcc
gataacagcgagtttcttttcagctgttcaagcgatcgccgagcgtgcctctgggacctg
tcaagcggctctgtcattcgtacgtacgagggtcacaaactcgcggtaactgcactggct
gtttcggtaacgacgctatag
DBGET
integrated database retrieval system