Cyanidioschyzon merolae: CYME_CMH262C
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Entry
CYME_CMH262C CDS
T00175
Name
(RefSeq) TATA-box binding protein-associated factor 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CYME_CMH262C
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cme01001
]
CYME_CMH262C
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CMH262C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMH262C
Enzymes [BR:
cme01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
CYME_CMH262C
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
CYME_CMH262C
Protein kinases [BR:
cme01001
]
Serine/threonine kinases: Other
TAF1 family
CYME_CMH262C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CYME_CMH262C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
CYME_CMH262C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
Xre_MbcA_ParS_C
Motif
Other DBs
NCBI-GeneID:
16993582
NCBI-ProteinID:
XP_005536192
UniProt:
M1UQU4
LinkDB
All DBs
Position
8:677032..682347
Genome browser
AA seq
1771 aa
AA seq
DB search
MSSDNGAVPRGDSSEFQDANWPADAAPALSGFLFGNVDAEGRLEADYLDADAKASLHVIA
PMVLPDDAEVFTVATARASKNFNDGHELGADPRASSALGRGVSQVLTSAPLNGDTGLVHA
ASAAPETEQDRVRPLRSTPSLVQDRSASPENLDFYDASDLSEDLDTSFDSPGFMKPSSSA
PQRTLEVVVGASEGALPSAESSEHQHRHGDENAYSLHEQAAREALLSTDYDALSEGDDET
GDSKLKVAEPARLGPGTSSAGSERALLSAERAPLQPQPAAKASSPQQNLCSDTDIPRFTR
FLVPEELVHPFHATKRKRIRWQSKSTQADDPSERLVGEELLFQRPEDLRWIRFPYAYLIL
DDMQEVQELLRKTIHRRVLAGRAGESKANTRRCTPLVAEAVTEIASSREGTPATPAHQAV
EAPVADAHRSNGRLAAGERTRAAAPCARPHTTSADDTCAAFLWQQWQWEQDVCWEETNKS
TTLRYLPASERLEHDAQRNEALVNGAWTQLVAWEGPAPVWQRWRHQLGKKTTSVLELDEH
AIAISRRFSWLHLDENDPQLILCRAANRLLTQSAPNLYLPQQLGQIESLLMNASNDRFYG
IEMTGQRRRSARTEALANLRHALKARQGYTSAWCYGYTEPQSYYRPNILPILWQLCGQRA
VPLLLFAAKSAPSMLPHEMRAWVPKSWSDLSGISPKAGGDIYLFEYPLEADPFLVQLPGM
ASRLLTYSRRAADDTVSNPSEDPDTVYLAADDLPPLHTGDVRPGQVLRVYENNAFAAPFE
PVSPPQTDFLVVCSAQRGLYVRPIKQVLAIGRLEPRNRPKVMIPNSDRMKRFVKNKIELD
VTRELIRRGDTGVERSEVIQMFPRRRVYPETTIASVLRETCDNARNRYVIKKNYVETVWP
KRELELLRFVTPEETCAFESMEIGWEQLSAKGITIFSSPSMQGNIVGGAEKAGLGARGIE
IARYIREELAKTRWVRTEVLVRAQKSLQFALRSVLSAASLAMDILRGNPAADDRLKTMSR
DDALRFLKVQFSCNLNPSQRAAIDVAETRAATVRQIALERARQRPLVPLAVQVQRLIDEH
VQTVRALSLEHQLVLLREGYPRSATGRPSGSGLNNNIGRKALQRMENSRATNMPKPADDW
EERQELSRLLASQRRSVPAPMDSGLSVSGSDRRSEASSAPVQYVRKRRLKIIRRINGQVQ
VLYLEDPQEIEAYLQHRRMREEALRTGIGGGIGFAARSMTQSRKAGKKGTAEERLRERLE
ELAEAARRINAWMLGPTTALGAAKPATTMTTTTGAAGAATSASNGASTAQSSHAIAEALS
GAVHTIRESIRISGASTNQAVGTLGDTGRLQQRPAAPPATSMRAETGAASMQHHQAGLWL
DASASNSTDVSWLRVTLPNQQQQQQQQQQPAGTPPVASFRSVAERDGEASLLEPSQAGFP
AAHRKPDTIESGQHGDQIPSVEHSDQQGAFAWLAPDRANALTSDLSQSSSRNASPKPSSL
VTNGAGAPSRLKLRIPAALATEAPGLSQGAQLHGTAESTSGVPAPALTSEAPPSSGVPRI
FIWAPKDEPEGSLSASTRTSSGFEASTALAKDTTLWVEQGSSPRPGPRVRVSKRSSGKVH
LNNILREVETCVRDAEGVVVATTPYISVVRVRPGEALPPGGLDRPAKLAVAGNIDFINPV
RDAAYRKKIPLPKQMYLQRIRRKCEEVAYNSVDEFLSDMRQIVENARQYHTAPEAHWVVQ
HAEYLHEAAEEELKKRQQDIDEAIQRDAQAP
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgataatggagcggtacctcgcggagactccagcgagttccaggacgcaaac
tggccggcagatgccgccccagcactgagcggctttctctttggcaacgtcgacgccgaa
ggccgtctcgaagcagactacctcgatgcggacgcgaaagcctcgctgcacgtcatagca
ccaatggtgctgcccgacgatgccgaggtgttcactgtcgctacagcacgcgcgagcaaa
aacttcaacgacggacacgagctcggagcggacccgagggcctcgagtgcgctcgggaga
ggcgtgtcgcaggtgctcacctccgctccactgaacggggatactggtctggtgcatgct
gcctccgctgcgcctgagaccgaacaagatcgagtgaggccgctgcgctcgaccccgtcg
cttgtccaagacaggagcgcgtctcccgagaacctcgacttttacgatgcgtctgatctc
tctgaagacctcgataccagtttcgactccccgggatttatgaagccctcttcgagcgct
ccacagcggacgttggaagtggtcgtaggggcatcggagggcgcgctgccttccgctgag
agcagcgagcatcaacaccggcacggagacgaaaacgcgtatagccttcatgagcaagct
gctcgcgaggcgctgctctccacggactatgacgccctaagtgaaggcgatgatgaaacg
ggcgactcgaaactgaaggtcgccgagcccgccagactcggacctggaacctcatctgcg
ggctctgaacgagcgttgctgtcggcggagagagcgcccctgcaacctcaaccggctgcg
aaagcctcttcgcctcaacagaatctttgctcagatacggatataccgcgtttcacgcgc
ttccttgtgccagaggagctggtgcatccatttcacgccacgaagcggaaacgaatccgc
tggcagagcaagtcgacacaagcagatgatccgtccgaacgcctggtcggtgaggagctt
ctcttccaacgaccagaggatctcagatggatccgttttccctatgcctacctgatttta
gacgacatgcaagaggtacaggagctcttgcgcaagacgatccaccgacgtgtcctagcg
ggccgcgctggtgaatccaaagcgaatacccgccgctgcacaccgctggtagctgaagcg
gtcacagagatagcgtccagtcgtgaaggtactccagcgacaccagcacaccaagccgtc
gaggcgcctgtagcggatgctcaccgctctaacgggcgattggctgcaggggagcgcacg
cgagccgcagcaccttgtgctcgtccacatacgacaagcgcggacgatacctgcgctgct
tttctgtggcagcaatggcaatgggagcaggatgtctgctgggaagaaaccaacaagtcc
acaacattgcgatatttgccggcttcagagcgactcgaacatgacgcgcagcgaaatgaa
gcgcttgtcaatggcgcctggacgcagctggtcgcctgggaaggaccggcacctgtgtgg
cagcgctggcgtcatcagctggggaagaaaaccaccagcgtactagaactagatgagcat
gcgattgccatcagcagacgattcagctggctgcatctggatgagaatgatcctcagctg
attctgtgtcgcgctgcgaatcggctgttaacacaatcagcgccgaatctgtacctgccg
cagcagttaggccagatagagtccctgctcatgaatgcgtccaacgatcgtttttacggt
atcgagatgaccgggcaaaggcgacggagtgcccgcaccgaggccctcgcaaacttgcgt
catgcactgaaagcgcgccagggctatacctcggcgtggtgctacggctacacggaaccc
cagagttactatcgaccgaatatcttgccgatactctggcagttgtgcggtcagcgtgcg
gtgccgttgctcctatttgcggcaaagtcggcgccctcgatgctaccgcacgagatgcgt
gcctgggtcccgaagagctggagcgacctctcgggcatttcgcccaaagcaggcggagat
atttacttgtttgaatatccactggaagccgatccttttctggtccaattgccaggtatg
gctagtcggctgctcacctatagtcgccgtgcagctgacgacacggtctcgaatcccagc
gaagaccccgataccgtctatcttgccgcagacgacttgcctccgctgcacaccggagac
gtgcgccccggtcaggtgttacgcgtctatgagaacaatgcgtttgcggctccgtttgaa
cccgtttcgccacctcaaacggactttttggtcgtctgttccgctcagcgcggattatac
gtacgtccaatcaagcaagtcctagcgatcgggcgtctcgagccacggaaccggcccaag
gtcatgattcccaatagtgaccgcatgaagcgtttcgtgaaaaacaagatagaactcgat
gtaactcgtgagctgattcggcgtggcgataccggggtcgagcgctccgaggtcattcag
atgttcccgcgacgtcgggtttaccccgagaccacgattgcgagcgtgctgcgcgagact
tgcgacaatgcccggaaccgttacgttatcaagaagaactatgtagagaccgtatggccc
aaacgtgagctcgagttgttgcgtttcgtgacgcccgaggaaacctgcgccttcgaatcg
atggaaatcggctgggagcagctgtctgccaaagggatcacgatcttttcgagcccgtct
atgcagggaaacatcgttggcggagccgagaaagcaggtctcggagcccgaggtatcgag
attgctcgctacattcgagaggaactggccaagacacgttgggttcgcactgaggtgctc
gtgcgcgctcagaagagtctccagttcgcgctgcggagtgtactgagtgctgcatccctg
gcgatggatatcttacgcggcaatccagctgcggacgatcgactcaaaaccatgtcgcgg
gatgatgcgctgcggtttttgaaagtgcagttctcatgcaacctgaacccttcccaacgc
gcagccattgacgttgccgagaccagagctgccaccgtccgtcaaattgcccttgagaga
gcccgtcaacgcccgcttgtaccgcttgctgttcaagtgcaacgtctcatcgatgaacac
gtccagacggtacgggcgctctcgctggagcaccagctggtgctgctacgtgagggatac
ccccgcagcgccaccggtcgccctagcggcagcggcctcaacaacaacatcggcagaaaa
gcgctgcaacgcatggagaattctcgggcaacgaacatgcccaaacctgctgatgactgg
gaggagcggcaggagctgtcacgtctgttggcctcgcagcggcggagtgtgccggctccg
atggactcgggactctccgtatccggttctgatcggcgctcagaggcgtcaagcgcacct
gtgcagtatgtgcgcaagcgtcgcttgaagatcatccgccgaatcaacggtcaggtgcag
gtgctgtatctggaagatccccaggagatagaggcgtatcttcagcatcggcggatgcgt
gaggaggccctccgcaccggcattgggggcgggatcggattcgctgctcgcagtatgaca
cagagtcgcaaagcaggtaagaagggaaccgcagaagagcgtctccgggagcgcctcgaa
gagttggctgaagcagcgcggcgcatcaacgcgtggatgctggggcccacgacggcgctc
ggtgccgccaaacctgcaacaacaatgacaacaacaacaggagcagcaggagcagcgacc
agtgcttctaatggtgcaagtaccgctcagagctcacacgctatcgcggaagcgctctct
ggcgccgtgcatacgatccgagagtccattcggatcagcggtgcctcaacaaaccaggcc
gtaggcactctgggagacaccgggcgcctgcagcagcggcctgcagcgccaccggcaacg
tccatgagagcagagacaggtgctgcttctatgcagcatcatcaggcgggtctgtggctg
gacgcgagcgcctccaactcgaccgatgtctcttggttgcgggtgacactaccaaatcag
cagcagcagcagcagcagcagcagcagcctgcaggaacgcctccagtagccagttttcgc
agtgtagccgaacgcgacggtgaggcatccctactggagcctagccaggccgggttcccc
gctgcgcaccgcaagcccgacaccatcgagagcggtcagcacggagaccagataccttct
gtcgagcacagtgaccagcagggagcatttgcgtggctcgccccggatcgagcgaatgcg
ctcacctcagacctgagtcagtcatcgagccgaaacgcttccccgaaaccctcatcactc
gtcaccaatggcgctggtgcgcccagccgcctcaagctgcgcattcccgctgcacttgca
accgaagcgccggggctttctcagggagctcagctgcacggcactgcggagagtacgagt
ggcgtgccggcaccggcgctgactagtgaagcgcccccctcatccggtgtgccgcgcatt
ttcatttgggcacccaaagatgagcctgagggctcgctatccgcatctacgcggacgtcg
agcggattcgaagcatccaccgccctggcgaaggatacgaccctctgggtggaacagggc
tcatcaccgcgacctggtccccgagttcgggtcagcaaacgtagcagcggcaaagtgcac
ctgaacaatattctacgggaggtggaaacctgcgttcgcgatgccgaaggcgttgttgtt
gccaccacgccctacatctctgtggtgcgcgtacgtccgggtgaagcgctgcccccgggc
gggctcgatcgacccgccaagcttgccgtagccgggaacatcgactttatcaatccggta
cgtgacgctgcgtaccgcaagaaaataccgttaccaaagcagatgtacttgcagagaata
cggcgcaaatgtgaggaggtcgcctataattcggtggacgagttcctgtcggatatgcgc
cagattgtagagaatgctcgtcagtaccatacagctcccgaagcacactgggtcgtccaa
cacgccgagtacctgcacgaggcagccgaggaggagctcaagaaacgacaacaggatatc
gacgaggcgattcaacgggacgcgcaggcaccctga
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integrated database retrieval system
