KEGG   Cyanidioschyzon merolae: CYME_CMI077C
Entry
CYME_CMI077C      CDS       T00175                                 
Name
(RefSeq) probable mRNA-associated protein MRNP 41, RAE1 homolog
  KO
K14298  mRNA export factor
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CYME_CMI077C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cme03019]
    CYME_CMI077C
   03036 Chromosome and associated proteins [BR:cme03036]
    CYME_CMI077C
Messenger RNA biogenesis [BR:cme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CYME_CMI077C
Chromosome and associated proteins [BR:cme03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CYME_CMI077C
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RSE1_2nd EIF3I WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 16993838
NCBI-ProteinID: XP_005536262
UniProt: M1UQZ1
LinkDB
Position
9:222880..224106
AA seq 408 aa
MAATFGTGTPFGSGSSTAFGNSSNFGTAASGGALNTATLNPNNDFMVSDPPNDTISSVHF
SPAALLPRNFIIATTWDNEVRLWEVHSNGSTQGLGMIRHEAPVLASAWKSDGTRIFSAGC
DRICKMWDPATNAVDTVAYHDGPIRHCAFVGETSGVAGTPFLMTAGWDRTLKYWDVRAPP
NPAQGGGGAMGTVSLPERCYAMDVNGSLVVVGTADREVLWFDLRQPLQPAGRKTSPLRYQ
TRCISIFADRTCYAISSVEGRCGIEYLQDTSKSFAFKCHRIDQGAGGQERITPVNCVTTY
PSTAPELVDVLATAGGDGRVNIWNKAAKVKTKGLKEVPLPIVALEFNANGAILAYAMGYD
WSQGASGYARFQSVPPEQRNLIFLHAVQDDEIRSKSAGARPPVRKGLF
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggctgcgacattcggtacaggaacaccatttggatcgggatcgtctacggctttcgga
aacagcagcaacttcggaactgctgcctctgggggcgctctgaacaccgcgacactcaac
ccgaacaacgactttatggtaagtgatccgccaaatgataccatttcatcggtgcacttt
tcaccggcagcgctactgccccgtaactttatcatcgcaacaacctgggacaatgaggta
cgcctctgggaagttcattccaatggcagtacccaaggtctgggtatgatacgccacgag
gctccggtgttggcgtccgcctggaagagtgacggcaccagaatcttctcagccggttgt
gatcgcatatgcaagatgtgggacccagctactaatgcagtcgacactgtcgcctaccat
gacggacctatccgtcactgtgcgttcgtcggcgagaccagcggcgttgccggcactccg
tttctgatgacagcgggctgggatcgaaccctcaagtactgggatgtgcgcgctccgccc
aatccggcacaaggtggtggcggtgccatgggaaccgtgtcgctcccggagcgctgctac
gcaatggatgtgaatgggtcgctcgtcgtggtcggaactgcggatcgtgaggtgctctgg
ttcgatctccgacagccgctgcagccggcaggtcgaaagacatcgccactgcgttaccag
acgcgttgcatctcgatctttgcggatcgtacttgctacgcgatctcgtccgtagaaggg
cggtgcggaatcgagtacctgcaggatacttcgaaatccttcgccttcaagtgccatcgc
attgatcagggtgcaggcggtcaggagcggatcactccagtcaactgtgtgacgacgtac
ccgtcgaccgcaccagagctggtggacgtgcttgcaaccgccggcggcgacggtcgggtg
aatatctggaataaagccgcgaaagtgaagaccaagggcctcaaagaggttcctttgccg
atcgttgcccttgagtttaatgcgaatggtgctatcttggcctacgctatgggctatgac
tggagtcagggagccagcggatacgcacgatttcagtcggtgcctcccgagcagcgcaac
cttatttttctgcacgccgttcaggacgacgagattcgtagcaagagcgctggggctcga
ccgccggttcgcaagggcctcttctaa

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