Cyanidioschyzon merolae: CYME_CMI098C
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Entry
CYME_CMI098C CDS
T00175
Name
(RefSeq) similar to eukaryotic translation elongation factor 2
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CYME_CMI098C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMI098C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
Pre-60S particles
GTPases
CYME_CMI098C
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_III
MMR_HSR1
T6SS_Tle1-like_C
Motif
Other DBs
NCBI-GeneID:
16993811
NCBI-ProteinID:
XP_005536276
UniProt:
M1V537
LinkDB
All DBs
Position
9:complement(283956..287756)
Genome browser
AA seq
1266 aa
AA seq
DB search
MLLPAEERIPETSTVHPPGRRFRQPSRSPAGGELERLHRIRRILTEAPLRLRNICVTGHI
DHGKTTLTDSLLMSNGFLSQRLVGKARYLDFRDDEQNRGITMKSAGVTLYHRYGGREANT
KAADEYVVTLLDSPGHVDFAAEVSAAARLSDGSLIVVDVVEGVCSQTRTVLRQALSEGLQ
PILVLNKIDRLFLELQLDATEAYLHLRRVLEDANAVLGAHIAEQRLRLEEQASLWACAPD
QETTCTSAQVTARAVPAVEIHPSMPTDQAEVHEEETLFEPAAGNVVFASALDGWAFRLAD
MVQFVAQRFGIRQEVLDRTLWGDFYIDAKQKRVQRIRESLTASGRPPRSLFAQFVLEPIA
YLYQRLVKSANDEQVDRSERQRLVERLGIAVPERDLFHRDGRYALQSMLSRWLPLSQTVL
DAVVDLVPAAVIANRQRLGNLWPHDATQHPLAQVLARAISEGDISDEAPVMIYVSKVMGV
EGAALAALGVAARPARRPPAGSDTQEEEDECWEPQQRFERDQQVQLALGRILCGAVEVSS
RFGELFVYGPRYNAEDAETHTEPFCVRLPDARLEAFLLHGRDVASLRDRMETETSVRQRL
VPGAVVALYGVGEVILKSATISTLPPGRCLPCANLLRHGQTSPVVFFAVEPAAQLSDLPR
LRRGLRLLNQADPAVETFISGSGEMVLGVSGELHLQRCLCDLEERFAGVPVKCSAPMTAV
RETVAGGVSTSPANPWVVLLTRSAGVGGLSGAAVHGAGQSSTATENTDSVLESLAERFEQ
TSVHERAALGSMADASSTFSGAAALEKWASWSGYREEQHRVLLGGGIVPVPLPSHNITLY
IYAAPLPRTFVQAWESSSRGALRSLFLQPKRGVASQRPATAPRLQAELLVRLHRAVMEDA
GSADQRPAPSALVEQGAECSPHECSITDGTAQRRLATLFRMLVEQAAALGPHDCGSNVLV
VPATAAAATAATAGYHTHHERPQDLESDAPEANTEAEHAAGAASRSEMRHWDRIRDVFRQ
VWGQPLPSTTAAAEGSLPTTVYRALVSAFQVVCAAGPLVEEPLQGVCFVVHVADECQETS
DSATRAGSLSASSTRDATSLISLLTEALRQALLAANPRLVEPLFQTEVQCSSNALGRVHT
VLRAARAQVLSEQIKEYQVTSTFFIRALVPASAIFGLAEKIRRASSGVASDVELRFVGDW
KVIEEDPFWYPATAEDIELLGVEDTTASMNNLARNLMEQVRARKGRLVAYKLVERAEKQR
TLARKK
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgttgttacccgcggaagaacgcattccggaaacctccacagtgcacccgccggggcga
cgtttccgtcagccaagccgctcaccggccggcggagagctcgagaggctccaccgcatt
cgccgaattttgacggaggctccacttcgactgcgtaacatctgcgtgactggtcatata
gaccatggaaagaccacgctgacggactccctgctcatgtcgaacggttttctctctcag
cgactcgtaggcaaagcgcgatatctggactttcgcgacgatgagcagaatcgaggcatc
accatgaagtcggcaggcgtcacgctctatcatcgctatggtggtcgcgaagccaacacg
aaagccgcagacgaatacgtcgtaacgttgctggactcgccgggtcatgtggatttcgca
gctgaggtatcggcagctgcaaggctcagtgacggctcgctcatcgtcgttgatgtcgtt
gagggagtctgcagccaaacacgcacagttctccggcaggcattgagcgagggactccag
ccgattctggtgttgaacaagatcgatcgactgttcctggaactgcaactggatgccacc
gaagcatacctgcacctgcgacgtgttctcgaggatgccaatgctgtgcttggcgcccat
atcgcagagcagcggctgcgcctggaagagcaggcctcgctttgggcgtgcgcccccgat
caagagacgacctgtaccagtgctcaggtgacggcgcgagcagtgcctgcggtcgaaata
cacccatcaatgccaacggatcaggcggaagtccacgaggaggaaaccctcttcgaacca
gcagctggcaacgtggtgttcgcatctgccttggacggatgggcgtttcggctcgcggat
atggtccagttcgtggcgcagcgctttgggattcgccaggaggtgctcgatcgcaccctc
tggggtgacttttacattgatgctaagcagaaacgggtccagcggatccgggaaagtctg
acagcgagcggacgcccaccacggagtctttttgcgcagtttgtccttgaaccaatcgct
tacctctatcaacgattggtcaagagtgccaatgatgagcaggtcgaccgctccgagcgg
caacgtttggtcgagcgactcggcattgccgttccagagcgcgacctctttcatcgcgat
gggcgctatgcgctgcagagtatgctctctcgctggttgccgttgagtcagaccgtgctg
gacgctgtggtggacctggtacccgctgccgtgatcgcaaaccggcagcggctgggaaat
ctgtggcctcatgatgctacgcagcatcccttggcccaggtactggccagggcgatcagc
gagggcgacatctccgacgaagccccggtaatgatttatgtgagcaaagtgatgggtgtc
gagggcgctgcgcttgcggcactcggcgtggcggcacgcccggctaggcgccctccggcg
ggttccgacacccaggaggaggaggacgagtgctgggagccccagcagcgtttcgaacga
gaccagcaggtccagctcgcactgggccgtattctctgcggtgcagtggaggtttcctcg
cggtttggtgaactgttcgtgtacggacctcggtataacgccgaagatgcagagacacac
acggaacctttctgtgtgcggcttccagatgcgcgtctggaagcctttctgctgcatgga
cgagacgtcgcctcgctcagagaccggatggagacggagacatcagttcgacaacggctc
gtacctggtgcagtggttgcactgtatggtgtcggggaggtgattctcaagtcggcaacg
atttcgacacttccgccggggcgttgtctgccgtgtgcgaacctcttgcgccacggacag
acgagtccggtggtttttttcgctgtggagccggcagcgcagctctctgatctgccacga
cttcgtcggggcctgcgtctcctcaatcaggcggacccagcggtggagacgttcatctca
gggtcaggcgaaatggtgctcggtgtcagcggagaactgcacctccagcgctgcctgtgc
gacctcgaagaacgtttcgcgggtgtgccggtcaaatgctctgcaccgatgacggcagta
cgggaaacggttgctggtggagtgtcgacgagtcccgcaaacccctgggtcgtcctgctc
acgcgatcggctggtgtcggtggcctcagtggcgccgctgtgcatggtgcaggccagtcg
agcactgcgacggaaaacaccgattctgtactcgagtcgctggcggaacgcttcgaacag
acgagtgttcacgagcgtgcagcactcggttcaatggcggacgcttcgtcaacgttcagc
ggcgctgcggcgctggaaaagtgggcctcatggagcggataccgcgaagagcagcatcgc
gtgctcctcggtggcggcatcgtgccggtgccgttgccgtcccacaatatcacgctatac
atctatgcagctccactgccgagaacgttcgtgcaagcatgggaatcctcgagtcgaggc
gcgctgcgctcactctttctccaaccgaagcgtggggttgcctcccagcgacctgccact
gcgccacggctccaagcggagttgctcgtgcgcctccaccgggccgttatggaagatgcg
ggttccgcggatcagcgtccagcaccgtcagcgctagtcgagcagggagccgaatgctca
ccgcatgaatgcagcataacggacggtaccgctcagcgtcgccttgcgacgttattccgt
atgctggtggagcaggctgcagcgctgggtccgcacgactgcggttcgaacgtgttggtg
gtaccggcgacagcggcagcggcaacggcagcgactgccgggtaccacacgcatcatgag
cggccccaagaccttgaaagcgatgctcctgaagccaacacggaagcagaacacgccgca
ggagctgcaagtcgctctgaaatgcgtcactgggatagaattcgcgacgtttttcggcag
gtctggggccagccgctcccgagcaccacggcagccgcagagggatcgttgccgaccaca
gtgtatcgggcgctggtttcggcgttccaggtggtttgtgctgccggtccccttgtggag
gagcctctccagggcgtctgcttcgtggtgcatgttgcagacgaatgtcaagagacatcg
gactcagcgacgcgggccggttcattgagcgcctcctccaccagggacgctaccagcctg
atctcgcttctgacagaggcgcttcgccaggcgcttttggctgcgaacccgcgacttgtc
gagccgctcttccagacagaggtgcagtgctcgtccaatgctctcggtcgggttcacact
gtgttgcgagcagcccgcgcccaagtgctcagcgaacaaatcaaagagtatcaggttact
tccacgttcttcattcgcgcactagtccctgcatctgcgattttcggtcttgcagagaag
atacgccgggcgagtagcggcgtcgccagtgatgtcgagctgcgcttcgtcggcgactgg
aaggtgatcgaagaggatcccttctggtacccggccaccgccgaggatatcgaattactg
ggcgtggaggacaccaccgcgtccatgaataacttggcgcgtaacttgatggagcaagtc
cgagcacgcaaaggccggctggttgcctataaactcgtcgagcgtgccgagaagcaacga
acgctcgctcgtaaaaagtag
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