| Entry |
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| Name |
(RefSeq) similar to CCR4-NOT transcription complex, subunit 2; NOT2
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| KO |
| K12605 | CCR4-NOT transcription complex subunit 2 |
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| Organism |
cme Cyanidioschyzon merolae
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cme00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYME_CMJ013C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cme03019]
CYME_CMJ013C
Messenger RNA biogenesis [BR:cme03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CYME_CMJ013C
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CYME_CMJ013C
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
10:complement(42498..44342)
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| AA seq |
614 aa
MPTNAGAGGGQGLTTSGSAGWSPPLLGRFQSFAQQLHGPSALASGALATTPPASAGPAND
SNAGFGSGPLNASAAAATTTTTATTSAGLTVSPALLTSGSPLFPPLGQTPPASSESHMGQ
QTAVFDLTDFPALGVGMMLNHGQGATSQASLGESANNSGAGNAMMGYGRVLGSPYSMSQR
VELTARDFPALGSKLQNPATLGVHSRLNPSLGTIGGNVTAGAVPNSFVAGTGAGAGNGAS
GTGALAAMSIPPASSTSTVGFLGAPSATGSSTAPTSLPPYAAGPAPATPSAPPPLPSAPL
ATPPSLPTLASLATTTTTTTSSASSSSGPAGSRSDAPEWSTRLNAEPNPSARLGMGQFST
EAGARSGVFSAAGTAAASATSMALNLLNLAHGSGTASGQAAGAENGTWGSPYGMLGLLAT
IRSQNADLSLLAHGVDLTALGLNLNSAEPLYPSFSSPFGPDLSRNGAPLEDTRTDETVGN
SLDAFAALPSCYSACTVSLKPAHFKRFSTETLILIFYGYPRDLVQVYAALELFNRGWRYH
KELKTWFARSGPGVESLAPDPSDAKSISSSGNQLVYFDLHNWSLKPFANAGTLPNLMRGF
LTEAELREMMAACK |
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| NT seq |
1845 nt +upstreamnt +downstreamnt
atgccaacgaacgctggcgctggcggaggccagggtctgacgacttcggggagcgctgga
tggagcccgccgcttcttgggcgcttccagtcgttcgcacaacagctacacgggccgtct
gcgctagcaagcggcgcgttagcgaccacaccgccggcttcagctggccctgctaatgac
tccaacgctgggtttgggagcggcccgctcaacgcctcagcagcagcagcaacaacaaca
acaacagcaacaacgagcgctggtctgacggtgtcgcctgcactcctgaccagtggctcg
cctctgtttccgccactgggccaaacaccgcccgcgtcaagtgagtcacacatgggccaa
cagactgcagttttcgacctgacggatttcccggctcttggtgtgggaatgatgctgaat
catgggcagggtgcaacgtcgcaggcttctcttggagagtcagcgaacaactcgggagct
ggcaatgcaatgatggggtacggtcgggttctggggagcccgtattcgatgtcgcagcgg
gtggagcttactgcgcgagactttccggcgctgggatcaaaactccagaacccggccacg
ctcggtgtccattctcgactgaacccatccttgggaaccataggtggcaacgtgacggct
ggcgcagtgcccaactccttcgttgctggtactggagcaggtgccgggaacggagcctcg
ggtaccggtgctctggcggcgatgtcgataccgccggcgtcgtcgacatcgacggtcggc
ttccttggagcaccatccgccacgggatcatcgacagcgcccacttcgctgccgccgtac
gcagcagggccagcaccagcaacgccatcagcgccaccgccgttaccctcagcaccgctg
gcaacgcctccatccttgccgacgctggcatcgcttgcaacaacaacaacaacaacaacg
tcgtcggcgtcgtcgtcttcgggcccggcaggatcacgctccgatgccccagagtggagt
acgcgactcaatgccgagccgaatccgagtgcacgactaggaatgggccagttttccact
gaagctggtgctcggtcgggcgtcttctctgcagctgggaccgctgcggccagcgcgacg
tccatggcgctgaatctcttgaacttggcccacggctcggggactgcgtcgggtcaggcg
gcaggtgcggagaacggcacctggggctcaccgtacggcatgctgggactcttggcgacg
attcgctcgcagaatgcggacctgtcgctattggcgcacggggtagacctgacggccctg
ggtctgaatctgaacagcgcggagccgttgtatccttcgttttcgtctccgtttggtccc
gatttatcacgaaatggtgcaccattggaggatacccgaacagatgagactgtgggcaac
tcgctcgatgcatttgcggctctgccgtcttgttacagcgcatgcacagtgagcttgaaa
cctgcgcatttcaaacgcttttcaacggagacgttaatccttatcttttacggatatccg
cgtgatttggtacaagtatatgctgcactggagttgttcaatcgaggttggcggtatcac
aaggagctcaagacgtggtttgcacgatcgggaccaggcgtcgagagccttgctccagat
ccgtctgatgccaagtccatttcatcgagcggtaaccagctggtgtactttgatctccat
aactggtcgctgaagccgtttgcgaacgctggtacgcttccgaatttgatgcgtggattt
ctcactgaagcggagttgcgtgaaatgatggcggcgtgcaagtga |
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