Cyanidioschyzon merolae: CYME_CMJ052C
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Entry
CYME_CMJ052C CDS
T00175
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CYME_CMJ052C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMJ052C
Enzymes [BR:
cme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
CYME_CMJ052C
DNA repair and recombination proteins [BR:
cme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
CYME_CMJ052C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
16994143
NCBI-ProteinID:
XP_005534801
UniProt:
M1V7Z8
LinkDB
All DBs
Position
10:152813..155008
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AA seq
731 aa
AA seq
DB search
MADIRTAFQRAKQAAELQNDRGEQRQLLVEQQQWRNYNGAPNTVVACPVCSELRFASSIE
SHLTVCLERAVSPGDDALQVTLDRCTRRLNCSTEPHMSQVTNTVTNRALEHSVLRTLTKG
PYTYRLLALSVHWCLQFERHLFSAAELDYLSAFVSLATASQWLYSWLFFRKGFSTGRWFR
ACSLQTRYREVDVAKASRELIQHGFLKDRPACTDDYFRLLKSLTQAEVTTLCRDLGLQSA
CMLKTCVAGALFQTNKQKITPARRKLEETILPAVCSCPEALQALLAAWAALAPLGLENML
RDGLELKDPLPPCLVERPLFSSRSALEAFQSARELEQSFEQMLGTSEPAALEISMTAEQR
LREALKTSDEALIATRVTRYDQLCDLQRLYREPYTTVGVLANILWHSVSVAESHGHYLDS
VRRLELLLNANLCLRRRGKFYDRLSLILAQRLADRAGAFRVCLDSLSDAFVRDAERSVLW
KRASRLCRELGVDVRLPNDPALSIPIPERVLRGRALPGSGRRGGSVKFAGLDNTLAITVE
NLALQFYEAELGYTGAHLEGRTFEALFFIFFEDMLRLPVVDAFHVPCQAQPLDFGTEMFY
VNRADNIRKRLLELSMLSESELSQWTREQLQRSAIESRRWTPTQAPVPWDVIVAGLGAQG
LVQILTRLVTDLYYWRSGAPDLLLWRSSGKSSCKLVEVKSTNDTLAPKQRRWLQELIAAG
IDVELCLVRNH
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggctgacataagaacggcattccagcgggcaaagcaggcagcggaactgcaaaatgac
agaggagagcagcgacagctgctggtagaacaacaacaatggcgaaactataacggtgca
ccgaatacagttgtcgcttgtcctgtgtgctcagagttacgctttgcctcatcgatcgag
tcacatctaacagtatgtctggaaagagctgtctcacctggggatgatgcattgcaggtc
acgctcgatcgatgcactcgtcgcctaaattgctccacagagccgcatatgagccaggtg
acaaacactgtaacgaaccgagcactggagcactcagtgctgagaacactaacaaaggga
ccctacacgtatcgtctacttgcgctcagtgtgcactggtgtctccagttcgagcgacat
ctcttttccgcggcggagttagattacttatcagcattcgtttcgcttgcaactgcttca
caatggctctattcgtggttgttttttcgcaaaggtttctcgacgggccgctggtttcga
gcctgctcactgcagactcgctaccgagaggttgacgttgcgaaggccagccgagaactc
atccagcatggcttcttgaaggataggccagcgtgtaccgatgattacttcaggctgcta
aagtcgctcacgcaagcagaggtcaccactttgtgccgagatctcggcctgcaaagtgcc
tgtatgctcaagacgtgcgtcgctggggccttgtttcaaacgaataagcagaaaattacg
ccagcaaggcggaagctagaagaaacgatcctacctgcagtttgcagttgccccgaggcc
ttgcaggcgttgttggccgcgtgggcagcgctggcaccattaggtcttgaaaacatgctg
cgcgacggccttgaactcaaggatccattgccgccatgcctcgttgaacggccgctcttt
tcatcacgaagcgcactcgaggcttttcaaagcgctcgggagctagaacaatctttcgag
cagatgctcggcacctcggagccggctgcactcgaaatatccatgactgccgaacagcgg
cttcgtgaagcactgaaaaccagcgatgaggcgcttatcgcgacgcgcgtgacccggtat
gatcaactgtgcgacctacagcgtctctacagggagccctacaccactgtaggcgtcttg
gcgaatattttgtggcattcagtttcggttgcagagtcgcatggacactacttggattca
gttcgccgcctcgaacttcttctcaacgccaatctctgcctgcgacgtcgcggcaagttc
tatgatcgcctctcgctgatcctcgcgcagcgcttagctgaccgagcaggtgcgttccgc
gtgtgtcttgattcgctctcggatgcctttgtccgggatgcggagcgcagcgttctctgg
aaacgcgcatcacgcctttgtagggaactaggagttgacgtgagacttcccaacgatccc
gccttgtccatacctatcccagagcgagtcctccgggggcgagcgctgcctggatcgggt
cgtcgtggtggtagcgtcaagttcgccggtttggataacacgctagccattactgtggag
aaccttgctttgcagttctatgaagcagaactcggctacactggtgcgcacctcgaaggt
cgcacattcgaggccttattcttcatcttcttcgaagatatgctgcgcctaccggttgtc
gatgcttttcacgttccttgtcaggcacagcctcttgactttggcacggagatgttctac
gtgaatcgagctgataacatccgcaaacgtcttttggaactgagtatgctttctgaaagc
gaactctcgcaatggacacgcgagcagcttcagcgcagcgctatcgagtctcgtcgttgg
acgccaacacaagcaccggttccctgggatgtgatcgttgcgggtcttggtgctcagggg
ctagtgcaaattctcacacgtcttgtgacagacttgtattactggcgctcaggggcgcca
gacttgctattatggcgttctagtggcaaaagcagctgcaaacttgtcgaagtgaagagc
accaacgatacgcttgcacccaaacaacgccgctggctacaggaactgattgctgccggc
atagatgtagagctttgcttggtacgtaaccactaa
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