Cyanidioschyzon merolae: CYME_CMJ179C
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Entry
CYME_CMJ179C CDS
T00175
Name
(RefSeq) similar to Nedd4 binding protein 1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMJ179C
Messenger RNA biogenesis [BR:
cme03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
CYME_CMJ179C
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
PRORP
Motif
Other DBs
NCBI-GeneID:
16994055
NCBI-ProteinID:
XP_005534909
UniProt:
M1VCK6
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Position
10:complement(491770..492747)
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AA seq
325 aa
AA seq
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MLVEDSGHHLPESADIENALDLLLKAQLERAFGPELAEHFWAARQPRTLDERLAFIRKCW
IGVFKDSPLSTFGLERLEQLERLCRSKRRGRELSAAEHHQFAEELARLWEQVQRLLPRAA
PETSYASSASAGGVHSGDAHTPATLSDAESAHAAPEAMRIEAPATSARSASGCMARVSSD
VAAAATNVSLVVLDGENIAWAHGQNAVFSPKGIAIAVDFFRKRGYRCVVFLPDYRRKRAD
LPTVSASDALVFVPAGEYDDTFALGYAVGHDAILVTNDLLQDHLDQFYPDEGEAREALRK
WLGSHRCSFTFVGDEFLPNPHFFLP
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcgaggattctggccaccatctgcctgagagcgctgatatagagaacgcactg
gatttgctactaaaggcacagctagagagagcttttgggccggaactcgcggagcacttt
tgggctgcacggcagcctagaactctcgatgagcggctcgcgttcattcggaagtgttgg
attggtgtcttcaaggactcgccattatcaacttttggccttgaacgactcgagcaactc
gaacgcctctgccgaagcaaaagacgaggcagggaactatcggctgctgagcaccatcag
tttgcagaagagctcgcacgactctgggagcaggtccagcgattgcttccgcgtgcagca
cccgaaacttcctatgcgagcagcgcatcagctggtggcgttcacagtggagacgcgcat
accccagcaacactgtctgatgccgaaagtgcgcatgctgccccagaagctatgcgaata
gaggcacctgctacgtcggcgcggagtgcgtctggctgtatggcgcgggtttcttccgat
gtcgctgctgccgccacgaatgtatcgcttgtagttctggatggtgagaatatcgcctgg
gctcacggccaaaatgcagtgttcagcccgaagggcatcgccatcgctgtggacttcttt
cgaaagcgcggttatcgttgtgtagtgtttctcccggactatcggcggaaacgggctgat
cttcccacggttagcgcatctgacgcccttgttttcgtacctgccggagaatacgatgat
acattcgccctgggatatgcggttggtcatgatgcgattctggtgacgaatgatctctta
caggatcacttggatcagttctatcccgatgaaggtgaggcgagagaggccctgcgtaaa
tggctgggatctcaccgctgttcgtttacttttgtgggtgacgagtttctaccgaaccca
catttcttcctaccgtaa
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