Cyanidioschyzon merolae: CYME_CMJ257C
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Entry
CYME_CMJ257C CDS
T00175
Name
(RefSeq) single subunit mitochondrial RNA polymerase
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cme03029
]
CYME_CMJ257C
Enzymes [BR:
cme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYME_CMJ257C
Mitochondrial biogenesis [BR:
cme03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
CYME_CMJ257C
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
16993965
NCBI-ProteinID:
XP_005534971
UniProt:
M1V872
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All DBs
Position
10:691915..695673
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AA seq
1252 aa
AA seq
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MSERLRLLGRRVTLMDVLVQFTSRGRVPPAAINTVRRKVAHLGTLALEYIGDQVARTKRW
LRLSESLRDPAQPSCAGSRVWPSQGSTSTTETIYAEHARLRLIQDSKFAASGTTANRGTA
LTGSRLARLERTPTSQVRVASTYVARNRRNAQVGGRCSPLARQAESTGLLYLNPTVARCR
VLSVDGGAASLVSEAGSAAEETLPGTGRQVSQADDSSCDLRCPETPACAEEAQQRGPGRE
AKHLASPTSAAPLAPQGERLSSENVREASAWSRAPERISEPASPELGLRGHNEAHGPAVC
SLGGNASKRSTPSKPIAQESLFPVADGRPMRSSREPALIKTTGEPLSTQSAKEVANDEKL
DWVELQQRIASDSGLYGNRHALGLERYLNAAELAEATRLGLPGTMRSSDGYLHDEMDYLR
EFNLEERAVEAAVARYRSFTQSALERGDINSLQPSQRLLLSWFFPVTMAIHQEQERIRRG
ELSYDGNVCGPHLLRLKPEVLAVIALHETLGRVLQDRAGVAFIRVASAVGRSVQAEINLQ
RLRELHSEQRHRQLPQDRALRRTLALASTGSGGSRAVAAINLAAKRMELDTATWDDSVTI
KVGSVLISFVMKHALIHIDTPTGKQAVQAFRHGYRPLQREPRKVGVIELHKSVLNLLLAN
ESDLRETILPRFQPMLVPPRPWTAYNSGGYLRPRGLVMRVRGSRLQLEALKKGDLSEVFA
GLNALGATPWRINRPVLDVVEKLWRAGGDIAGLVARADLQLPALAESVVDPAPDGKESAA
STESLSREQRRAIWRIRKTNRERHALRCELHYRLETAREFADVSRFYLPHNLDFRGRAYP
MPSHLHHMSSDVCRGLLTFAGPGLRVGERGLFWMKVHLANLCGMDKLPFDERVAFAESVM
PKVLAVAAAPTADSNLEWWAQQEDPFQLLAACFELAAAKGGLDPDYHSTLPIQQDGSCNG
LQHYAALGRDERGGYQVNLLPSERPQDVYSGVAELVRERVAHDAREGVPIAQLLQGRISR
KIVKQTVMTSVYGVTLIGAREQIQNRLRELPDFPEEKTWEASFYLAKQTLGSLGDIFRGA
TDTMEWLAECALRVATSKERTNAVRWITPLGLPVIQPYRRREARLVNTVVQHVLLEAQND
HLPVSRARQRSAFPPNYIHSLDSTHMLMTALACRRAGLQFAAVHDSFWTHAATVDEMNRL
LRECFVRLHARDLLQELREQFQLRFPDVELPPVPPKGTLDLNQVLLSPYFFD
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgcctgcggctcttgggacggcgagtcacgcttatggatgttcttgtacag
ttcacgtcacgaggaagagtaccaccagctgcgattaacactgtacgtagaaaagtggcg
catctgggaactttggctttagagtacattggagatcaggtagctcgaacaaagcgctgg
ttgcgattgtcggagtcgcttcgtgatccagcgcagccgtcctgcgccggatcacgggtg
tggccctcacagggctccacaagtactacggaaacgatatatgctgagcacgcacgctta
cggctgattcaggactcaaagttcgcagcatccggaaccacagcgaaccgaggcacggcc
ctgactgggagccggcttgcacgacttgagcgtacaccgacgtcgcaggtgcgagtggct
tcaacgtacgtcgcacgaaaccggcgcaacgctcaagttggtggccggtgctctcctctg
gcgaggcaggcggaatcaactggtctgctttacctgaacccaacggttgcgcggtgtcgc
gttttatccgtggacggaggtgcggcgtctctcgtgagcgaggcgggttcagcagcggag
gagacgcttccaggcactggccgccaagtctctcaagctgatgactcttcctgtgatttg
cgttgtccggaaacaccagcttgtgcggaagaggcgcagcagcgaggaccgggccgagaa
gcaaagcatttggcttcgccgacctccgctgcacctctcgctccacagggcgagcgcctc
tcctcggaaaatgtgcgtgaagcctcggcgtggtcgcgagctcctgagcggataagtgag
ccagcatcgccagaactaggcctgcgtgggcataacgaggcgcatggccccgctgtatgc
tccctcggtggcaacgcttccaagcgatcgaccccgtccaagccgatcgcccaagagagt
ttgtttccggttgcggacggtcgtccgatgcgttcgagtcgagagccggcgctcatcaag
acaaccggggagccgttatccacgcagtcggcgaaagaggttgccaacgatgagaagctg
gactgggttgaactccagcagcgtattgccagcgatagcggcctctatggcaaccgccat
gccctaggactagagcgctatctgaacgcagcagaattagccgaggccacccgtctcggt
ttaccaggcacgatgagatcctctgatgggtaccttcatgacgagatggactatttgcgt
gaattcaatctggaggaacgcgcagtagaagcggccgttgcccgttatcgttctttcacg
caaagtgctctagagcgcggtgacatcaactcgctgcaacctagccagcgattgcttctg
agctggttctttcccgtgacgatggcgatccatcaggagcaggaacgtattcgacgaggc
gagctctcctacgacggtaacgtctgcggcccgcatttgctccggctgaagcccgaagtg
ctggcggtgattgcacttcacgagacgctggggagggttctgcaggatcgtgctggcgtc
gcctttatccgagttgcatctgctgttggccgctcggttcaagcggaaatcaacttacag
cgattgcgggagcttcactctgaacagcggcatcgtcagcttccacaagaccgggcgctg
cgacgcacgcttgcgctagcctcaacgggaagtggtggctcacgcgctgtcgctgccatc
aacctcgctgcgaagcgcatggagctggacaccgccacttgggatgattccgtcacgatc
aaagttggctcggtgctcatatcattcgtcatgaagcacgcgctcattcatatcgacacg
ccaacagggaagcaggcagtccaagcgtttcggcacggttaccgcccgctgcaacgagag
ccacgcaaggttggcgtgattgagttgcacaagtccgtgttgaacttgctcctcgccaac
gagagcgacttgcgagagacgattctaccacgtttccagccgatgcttgtgcccccgcga
ccttggaccgcatacaacagtggcggatatttgcgccctcgtggcctcgtgatgcgtgta
cgaggttccagactccagctggaggccttgaagaaaggcgatctgtccgaggtcttcgcc
ggcctgaacgcacttggtgcaactccgtggcggataaatcgcccggtcctggacgtcgtc
gagaaactgtggcgcgctggcggtgatattgcaggtcttgtcgctcgtgcagacctgcag
ctgccggcgcttgcggagtccgtcgtggaccctgctccagatggcaaggagtctgccgct
tcgacagaatcactttcgcgggaacaacggcgagccatttggcgaatacggaagacaaac
cgcgagcggcacgcgcttcgttgtgagctgcactatcgcctagagactgcccgagagttc
gccgacgtttcccgcttctacttgccgcataatcttgattttcgtgggcgcgcgtacccg
atgccgtcccatctacaccacatgagtagcgacgtatgccgcggtctcttgacgtttgct
ggacccggtctccgggttggtgagcggggacttttttggatgaaggtgcacctggcaaac
ctctgtggtatggacaagttgcctttcgacgagcgggtcgctttcgccgaatccgtcatg
cccaaggtactggcggttgccgctgcgccgactgcggattccaacctagaatggtgggcg
caacaagaagatccgtttcagctgctggcggcatgttttgagcttgcagctgcaaagggc
gggctggaccccgactatcacagcacgttgccgattcagcaggatggctcttgtaatggc
ctacaacactatgctgcattgggacgcgacgagcgcggcggctatcaggtgaatctgctg
cccagcgagcgcccacaggatgtctattctggagtcgctgagctcgtacgtgagcgggtg
gcgcatgacgcacgcgaaggcgtcccgatcgctcaactgcttcagggaagaatcagccgc
aaaatcgtgaaacaaaccgtgatgacctctgtttacggagtaacgctcattggagcacgc
gagcagatccagaatcgtctccgagagctaccggatttcccggaggagaaaacctgggag
gccagcttctacctggctaagcaaacgcttggctctctgggcgatatctttcgcggcgcg
acggataccatggaatggctcgcggagtgtgcgctccgtgtggcgacctctaaggagcga
accaacgctgtccgttggataacgccactcgggctgccggtcatccagccttaccgaaga
cgggaagcgcgtctcgtgaacactgttgtccagcacgtgctgctcgaggcgcagaatgac
cacttaccggtgagtcgcgctcgacagcgaagcgcgttccctccgaattatatccactca
ctggactcgacgcacatgctgatgacggcgctggcctgccgacgcgctggtctgcagttt
gcggcagtgcacgattcgttttggacacatgcagccacggtcgatgagatgaaccgcctg
cttcgcgaatgcttcgttaggcttcatgcccgcgatcttctgcaggagcttcgcgaacaa
tttcagcttcgttttccggacgttgaactcccaccggtacctccgaagggtacactggac
ctgaaccaggtcctgctgtcgccatactttttcgattaa
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